Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01301 ATGGGGGCGATAAAGGCCGCCGTAGCTGACGGAGTGCTTACGTTCATGTGGGTTTTCTGCGCATCCTCCATTGGGGTTCTGTCGTTCGTTATATCCTCCTCCCTGGGAGTTGTTGGCCTTCCTTTTCCTTCCATCTTTATAACCACTTTCATCTTTTTCGTTCTCGTATTCCTTTTCAACTTTATCGGCAGCGTCTTGGGTGGAGCTAGCTTCAACCCCACCGGTACCGCCGCCTTCTACGCAGCCGGCCTCAGCCCCGATTCTCTTATTTCTATGGCCCTGCGCTTTCCGGCTCAGGCAGCCGGAGCAGTTGGTGGTGCGCTTGCGATCAAGGAGGTGATGCCAACACAGTACAAACAGATGCTGGGTGGGCCTTCTCTGAAAGTGGAGGTTCATTCGGGAGCCATGGCCGAGGGGGTTTTGACATTTTGCATGAGCTTGGCTGTGCTTGTAATTGTGCTGAGAGGCCCTCGCAACCCTGCTGTTCAAGCATGGTTAATGGCCATGGCCACTGTCACCTTGATTGTTACAGGTTCTTCTTACACAGGACCTTCTATGAATCCTGCCAATGCATTTGGATGGGCTTATGTGAAGGAGAGGCACGACACATGGGAGCACTTTTACGTGTACTGGATTTTCCCATTCATCGGGGCTATTTTGGCTGCGTGGGTGTATCGGGTGTTGTTTTTGCGTGGCCCTGCGAAACAGAAGAGAGCCTAA 720 52.36 MGAIKAAVADGVLTFMWVFCASSIGVLSFVISSSLGVVGLPFPSIFITTFIFFVLVFLFNFIGSVLGGASFNPTGTAAFYAAGLSPDSLISMALRFPAQAAGAVGGALAIKEVMPTQYKQMLGGPSLKVEVHSGAMAEGVLTFCMSLAVLVIVLRGPRNPAVQAWLMAMATVTLIVTGSSYTGPSMNPANAFGWAYVKERHDTWEHFYVYWIFPFIGAILAAWVYRVLFLRGPAKQKRA 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31509930 31511243 - Bpe013194.1 Bpe03g01301 101806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01301 239 PANTHER AQUAPORIN SIP1-1 1 238 IPR044222 GO:0015250
Bpe03g01301 239 PANTHER AQUAPORIN SIP1-1 1 238 - -
Bpe03g01301 239 SUPERFAMILY Aquaporin-like 4 231 IPR023271 -
Bpe03g01301 239 Pfam Major intrinsic protein 4 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g01301 239 Gene3D Glycerol uptake facilitator protein. 2 236 IPR023271 -
Bpe03g01301 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g01301 239 PRINTS Major intrinsic protein family signature 208 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g01301 239 PRINTS Major intrinsic protein family signature 137 155 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g01301 239 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g01301 239 PRINTS Major intrinsic protein family signature 91 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g01301 239 PRINTS Major intrinsic protein family signature 168 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01301 Bpe-Chr3:31509930 Bpe04g01342 Bpe-Chr4:19977501 8.36E-123 dispersed
Bpe11g00779 Bpe-Chr11:5813498 Bpe03g01301 Bpe-Chr3:31509930 3.92E-08 wgd
Bpe03g01301 Bpe-Chr3:31509930 Bpe08g00157 Bpe-Chr8:844091 8.51E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01301 K09875 - vvi:100232979 341.658