Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00009 ATGGCGGACCAATATGTCTTCGATGCGCACGCCGCTTCCCACTTGCTCAACCACCTCAGACGCTCCTTCGCTTCCGGCAAGACCAAGTCTTTTGAATGGAGAATATCGCAGTTGAAATCTCTCCTCAAACTTTGCGATGACCGCGAGCAGGATATCGCCGATGCTCTTCGCTCCGACCTTTCCAAGCCCGATGTCGAATCTCTCGTTTATGAGGTAGCCATGCTGAAGAATTCATGTAGAAATGCACTGGCCCAACTCAAGCACTGGGTCATACCTGAAAAGGCTAAAACATCAATTACCACATTTCCTTCTTCAGCTGAAATCGTATCAGAACCTCTGGGTGTTGTGCTAATTATATCATCCTGGAATTATCCTTTCTTGTTGTCACTTGATCCATTAATTGGAGCTATTGCTGCGGGTAATGCTGTGGTTTTGAAGCCATCAGAAATTTCGCCTGCAACATCATCTTTACTTGCAAAACTAGTAGGTGAATATCTGGATAACTCTTCCATAAGGGTGGTGGAAGGAGCTGTTTCTGAAGCTTCAGCTTTGTTGGAACAGAAGTGGGACAAAATATGCTATACAGGCAATGGTAGAGTGGGACGCATCATAATGACTGCTGCTGCGAAGCATCTTACACCAGTACTTTTGGAGCTGGGAGGAAAATCCCCTGTTGTTGTCGATTCAGGCATTAGTTTAAAGGTCGCAACTAGACGAATAATTGCTGGTAAGTGGGGATGTAATAATGGACAAGCGTGTATCTCCCCAGACTACATCATAACTACAAAAGATTATGCTCCTAAATTGATAGAATCTCTCAAGCAAGAATTAGAAAAGTTCTACGGGAAGAATCCATTGGAATCAAAGGAATTATCCCGGATTGTAAACATCAATCACTTTACTCGCTTATCGAAGATCATGGATGAAGAGAAAGTTTCAGACAAGATTATCTTTGGAGGTGAAAGAGACAAATCCAACTTAAGGATTGCTCCTACCATCTTGCTGGACGTCCCTCGAGACTCCTTGATCATGACTGAGGAAATTTTTGGTCCGTTGCTTCCCATTCTTACGGTTGACAAAGTGGAAGACAGTTTGGATATAATAAACTCTGGTCCAAAGCCACTTGCGGCGTACATATTCACAAACAACAAGAAGCTCAAGGAGCAATTCGTCTCATCTGTCTCGGCGGGGGGTTTGGTTGTCAACGACACGACTATACATCTTGCAGTTCACAGCCTACCATTTGGAGGAGTGGGAGATAGTGGAATAGGTGCATACCATGGGAAATTTTCTTTCGATGCTTTTAGCCATAAGAAAGCAGTCGTCTATCGAGGATTCGCAGGTGATGCTTCAATGAGGTACCCGCCATTCACTCCTGGAAAGTTGAGAATTCTCAAGGCTCTTGTTGGTGGTAGTTTATGGGGCATTATACGTGCTCTTTTCGGGTGGTCTTGA 1455 44.26 MADQYVFDAHAASHLLNHLRRSFASGKTKSFEWRISQLKSLLKLCDDREQDIADALRSDLSKPDVESLVYEVAMLKNSCRNALAQLKHWVIPEKAKTSITTFPSSAEIVSEPLGVVLIISSWNYPFLLSLDPLIGAIAAGNAVVLKPSEISPATSSLLAKLVGEYLDNSSIRVVEGAVSEASALLEQKWDKICYTGNGRVGRIIMTAAAKHLTPVLLELGGKSPVVVDSGISLKVATRRIIAGKWGCNNGQACISPDYIITTKDYAPKLIESLKQELEKFYGKNPLESKELSRIVNINHFTRLSKIMDEEKVSDKIIFGGERDKSNLRIAPTILLDVPRDSLIMTEEIFGPLLPILTVDKVEDSLDIINSGPKPLAAYIFTNNKKLKEQFVSSVSAGGLVVNDTTIHLAVHSLPFGGVGDSGIGAYHGKFSFDAFSHKKAVVYRGFAGDASMRYPPFTPGKLRILKALVGGSLWGIIRALFGWS 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 92788 96509 + Bpe014737.1 Bpe04g00009 101818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00009 484 Pfam Aldehyde dehydrogenase family 14 441 IPR015590 GO:0016491
Bpe04g00009 484 PIRSF ALDH 2 478 IPR012394 GO:0006081
Bpe04g00009 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 20 439 IPR016162 GO:0016491
Bpe04g00009 484 PANTHER ALDEHYDE DEHYDROGENASE 4 484 IPR012394 GO:0006081
Bpe04g00009 484 SUPERFAMILY ALDH-like 15 446 IPR016161 GO:0016491
Bpe04g00009 484 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 217 224 IPR029510 GO:0016491
Bpe04g00009 484 PANTHER ALDEHYDE DEHYDROGENASE 4 484 - -
Bpe04g00009 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 421 IPR016163 GO:0016620
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00009 Bpe-Chr4:92788 Bpe13g00046 Bpe-Chr13:1350644 0 dispersed
Bpe04g00009 Bpe-Chr4:92788 Bpe07g00332 Bpe-Chr7:2577939 2.05E-40 transposed
Bpe04g00009 Bpe-Chr4:92788 Bpe05g00420 Bpe-Chr5:18586578 3.11E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00009 K00128 - twl:120017045 792.341