Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00025 TTTTCTGAGTTAGGGTTTTTACTAGGAATGGGAGACGTTTTGATTCATAAATTGGCATCTGCTAGAAAATCCTTGAGCCTTAGCTTGGAGAAATCTAAGGCTTTAGGTTCTGCTCTACATAAAACTGGCCCCCGATTGGAAGAGATTAAGCGGAGATTACCTTCCCTTGAGGCCGCTGTCCGCCCAATCCGTGCTGACAAGGACGCCTTAACTTCAGTCGGTGGCCATATTAACCGAGCAGTCGGCCCTGCAGCAGCAGTGCTTAAAGTTTTTGATGCTATTCATGGCCTTGAAAAGTCACTTTTATCAGATCCCCGCGGTGATCTACCTGGTTATCTGTCGGTGTTGAAACGCCTTGAAGAGGCATTGAGATTTTTGGGTGACAACTGTGGATTGGCAATTCAATGGTTGGAAGATATAGTGGAGTACCTACATGATAATACTGTAGCAGATGAGCGTTACATAGCAAACTTGAAGACTTCGCTGGTAAATCTTCGAGCACTGCAGAATGATAAGGAAAATAAAGATCTTGATGGAGGGCTTTTGCACGCTGCAATGGACAAATTAGAAAATGAGTTCCGCAGGCTACTTACTGAGCATAGTGTGCCTCTTCCAATGTCATCTTCATCCCTGCTTGAGGAGCAAGCAGCCATTGCACCATCACCCTTACCTGTTTCTGTTATTCATAAACTGCAGGCTATTCTGGGCAGATTGACCGCTAACAAGAGGCACGGGAAGGGCGTGTCGATTTATATAGAAGTACGCAGTTCGAATGTTAGAGCAAGTTTGAAAGCTCTGGATTTGAACTACCTTCAGATATCACTGACCGAATTCAATGAAGTACAAAACATAGAAGGACACATAGCACAGTGGGGAAGACACTTGGAGTTTTCTGTGAAACACTTGTTTGAGGCAGAATACGAGCTTTGCAAAGAAATATTTGAGAGGCTTGGGCCGGAATTGTGGATGGATTGCTTTGCAAAGATAGCAGCTGAGTCTGGCATCCTTGCATTTCTTCAGTTTGGGAAGACAGTTGCAGACAGTAAGATGAATCCCATTAAATTGTTGATGTTGTTAGATATATTTGCATATTTGAGTACTTTGAGGCTGGACTTCAACCGGCTTTTTGGCGGGGCAGCATGTGTTGATATCCAAAACCTTACAAGAGATCTTATTAAGAGGGTTATTAATGGAGCATCTGAAATCTTCTGGGAACTTCGGAATCAGGTAGAGTTACAGAGGCAAATTCCACCTCCGTCTGATGGGAGTGTTCCGAGGTTGGTAACCTTTATTTCTGATTTCTGTAATAAACTGCTTGGGGACAATTATAAGCCAATTCTAACCCAAGCTCTGGTCATTCACCATAGCTGGAAGCGTGAGAAATTTCAAGAAAAAGTTATTGTTAACGAAGTGTTGGAAATTGTGAAAGCAGTAGAGATGAATCTAGAGACATGGATTAAGTCTTATGAGGATTCCACTTTATCAAACCTTTTTGCAATGAATAACCACGGTCATTTATACAAGCATTTGAAGGGAACCAAATTGGGGGATCTTAAGGGACAACTTTGGTTGAAGGAACATGAACAATTCAAGGACTATTATGCCACAGTTTTTTTAAGAGATAGCTGGAATAAGCTTCCAGGTCATTTAAGTAGAGAAGGATTGATTTTATTCTCTGGGGGACGGGCTACTGCTCGAGATCTTGTCAAGAAAAGATTGAAAAGTTTTAATGAAGCTTTTGATGACATGTATAAGAAGCAATCAAACTGGGTTGTTCCCGACCTGGAAATGCGGGAGAAGATGTGCCAGCTCATTGTGCAGGCAGTTGTGCCTGTTTATAGAAGCTACATGCAAAATTATGGGGCCCTGGTTGAGCAAGATGGGAGCTCTTACAAGTATACTAAGTATACAATAGAGTCATTGGAAAAAATGCTCGTGTCTCTTTTTCAGCCAAAGCCTTCTAGATATGGCAGTTTTAAGGGAAGGCAGCCGAGTGGGAAATTCAGCAATGGCACTGCAGATTTTCGACGAACTGCCTCTGCAGTTATGTGA 2052 42.45 FSELGFLLGMGDVLIHKLASARKSLSLSLEKSKALGSALHKTGPRLEEIKRRLPSLEAAVRPIRADKDALTSVGGHINRAVGPAAAVLKVFDAIHGLEKSLLSDPRGDLPGYLSVLKRLEEALRFLGDNCGLAIQWLEDIVEYLHDNTVADERYIANLKTSLVNLRALQNDKENKDLDGGLLHAAMDKLENEFRRLLTEHSVPLPMSSSSLLEEQAAIAPSPLPVSVIHKLQAILGRLTANKRHGKGVSIYIEVRSSNVRASLKALDLNYLQISLTEFNEVQNIEGHIAQWGRHLEFSVKHLFEAEYELCKEIFERLGPELWMDCFAKIAAESGILAFLQFGKTVADSKMNPIKLLMLLDIFAYLSTLRLDFNRLFGGAACVDIQNLTRDLIKRVINGASEIFWELRNQVELQRQIPPPSDGSVPRLVTFISDFCNKLLGDNYKPILTQALVIHHSWKREKFQEKVIVNEVLEIVKAVEMNLETWIKSYEDSTLSNLFAMNNHGHLYKHLKGTKLGDLKGQLWLKEHEQFKDYYATVFLRDSWNKLPGHLSREGLILFSGGRATARDLVKKRLKSFNEAFDDMYKKQSNWVVPDLEMREKMCQLIVQAVVPVYRSYMQNYGALVEQDGSSYKYTKYTIESLEKMLVSLFQPKPSRYGSFKGRQPSGKFSNGTADFRRTASAVM 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 233252 235303 + Bpe014751.1 Bpe04g00025 101834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00025 683 SUPERFAMILY Cullin repeat-like 87 649 IPR016159 -
Bpe04g00025 683 PANTHER EXOCYST COMPLEX PROTEIN EXO70 15 673 IPR004140 GO:0000145|GO:0006887
Bpe04g00025 683 Gene3D Exocyst complex component Exo70 144 656 - -
Bpe04g00025 683 Coils Coil 155 175 - -
Bpe04g00025 683 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 15 673 - -
Bpe04g00025 683 Pfam Exo70 exocyst complex subunit 290 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01817 Bpe-Chr2:20374378 Bpe04g00025 Bpe-Chr4:233252 1.48E-62 dispersed
Bpe04g00025 Bpe-Chr4:233252 Bpe02g00708 Bpe-Chr2:4853642 5.42E-67 dispersed
Bpe04g00025 Bpe-Chr4:233252 Bpe10g00709 Bpe-Chr10:13496707 2.52E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00025 K07195 - rcu:8265192 1036.94