Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00037 ATGACGAAAAAGATTCACCTTCTCCTCTTTTCCACTCTACTTCTGCTATTTTCTCCGGCCAATTCTCAACAACGGCCTGTTTTTTATTTCCACGATGCGGAAATCGAGGTGCCGTCCTCGCTAGTTTTCGAAAATCCAAGAATCAAGAAGGCTTATGTGGCTCTCCAAGCATGGAAGCAAGCCATCGTCTCCGATCCCTTCAACCTGACCTCCAACTGGGTGGGATCCGACGTCTGCAACTACACAGGGGTTTTCTGCGCCCAAGCTCTCGACGATCCTTCTATCCAAACCGTGGCCGGCATTGATCTGAATCACGGCGACATTGCCGGGTATCTTCCTGAAGAGCTTGGATCGCTATCTGATATTGCGTTGTTTCACGTAAACTCCAATCGATTTTGCGGCAGAGTTCCCAGAAGTTTTCGGGAGTTGAAGCTTCTCTTCGAGCTCGACCTCAGCAACAACCGACTTGCAGGGAGGTTCCCTGACGTCGTCATTGATCTGCCAAACCTAAAGTATCTCGATCTTCGGTTCAATGAGTTTGAAGGAAAAGTACCCAAAGCTCTGTTCGATAAAGATCTTGACGCCATTTTCATCAACCATAATAGATTTGCTTTCGAGCTACCTGATAATTTCGGCAACTCGCCGGTTTCTGTCATTGTTCTTGCGAATAACAAGTTTCACGGATGCATGCCAGCAAGCTTTGGAAACATGTCCAAGACACTGAATGAAGCAATATTAAGGAACAATGGTCTGAGCTCGTGCTTGCCCGAGGAAATCGGAATGGCGAGGAATGTGACGGTGTTCGACGTGAGCTTCAATAATCTTATAGGTGAGCTACCGAAGACAATCGGTGAAATGGTAAGCTTGGAAGAGTTCAACGTGGGGCACAACAAGCTCAGAGGGACTGTCCCTGATAGCCTGTGTTCACTTCCGAAGCTGCAAAAGTTAAGCATAAAGAACAATTATTTCACCGGGGAGTCGCCGGCGTGTTTCGATCTGCAGAAGTTCGACGACGCCAGGAATTGCTTGCGTGATAGGTCTCATCAAAGATCCACTCTGCAATGTAAAGTCTTTTTATCCACGCCTGCTAATTGCAGTGCCTTGGAATGTAAATCCTTTGTTACATCTCCTCCGCCTCCGCCTCCGCCTCCTCCCCCATCTCCTCCTCCGCCTTCACCGCCTCCACCATCTCCTCCTCCGCCTTCACCGCCGCCACCATCTCCTCCGCCGCCTTCTCCGCCGCCGCCATCTCCTCCCCCGCCTTCACCGCCGCCACCATCTCCTCCTCCGCCGTCTCCATCTCCTCCCCCGCCGTCTCCATCTCCTCCCCAGCCTTCACCCCCATCTCCTTGTCCGCCTTCACCGCCACCTCCATCTCCACCACCGCCTTCACCGCCTCTTTCATGTCCTCCTCCTCCTCCGCCTTCACCGCCGCCACCACCACCAATATATTGCATTTGTTATCCATCACCACCTCCTCCCTTACTCCATCCTCCACCAAGTCCTTACTACAATCCACCTCCACCAAGTCCTCACTACAATCCACCTCCACCTTATATCCCTTATCCATCTCCAACTCCTCCCCCCATCTTTTATTCACCTTGTATAGGAAATTCCCCGCCGCCACCCACACCAAAAAATGAGCCATTGCCCCCCATCATCGGAGTCCCCTATGCATCTCCGCCGCCGCCACAATTCTATTATTAA 1707 51.49 MTKKIHLLLFSTLLLLFSPANSQQRPVFYFHDAEIEVPSSLVFENPRIKKAYVALQAWKQAIVSDPFNLTSNWVGSDVCNYTGVFCAQALDDPSIQTVAGIDLNHGDIAGYLPEELGSLSDIALFHVNSNRFCGRVPRSFRELKLLFELDLSNNRLAGRFPDVVIDLPNLKYLDLRFNEFEGKVPKALFDKDLDAIFINHNRFAFELPDNFGNSPVSVIVLANNKFHGCMPASFGNMSKTLNEAILRNNGLSSCLPEEIGMARNVTVFDVSFNNLIGELPKTIGEMVSLEEFNVGHNKLRGTVPDSLCSLPKLQKLSIKNNYFTGESPACFDLQKFDDARNCLRDRSHQRSTLQCKVFLSTPANCSALECKSFVTSPPPPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPSPPPPSPSPPQPSPPSPCPPSPPPPSPPPPSPPLSCPPPPPPSPPPPPPIYCICYPSPPPPLLHPPPSPYYNPPPPSPHYNPPPPYIPYPSPTPPPIFYSPCIGNSPPPPTPKNEPLPPIIGVPYASPPPPQFYY 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 371105 372811 + Bpe014762.1 Bpe04g00037 101846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00037 568 Gene3D Ribonuclease Inhibitor 52 214 IPR032675 -
Bpe04g00037 568 MobiDBLite consensus disorder prediction 374 475 - -
Bpe04g00037 568 Pfam Leucine rich repeat N-terminal domain 54 86 IPR013210 -
Bpe04g00037 568 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 34 463 - -
Bpe04g00037 568 Pfam Leucine rich repeat 263 322 IPR001611 GO:0005515
Bpe04g00037 568 Pfam Leucine rich repeat 126 179 IPR001611 GO:0005515
Bpe04g00037 568 PRINTS Proline rich extensin signature 397 409 - -
Bpe04g00037 568 PRINTS Proline rich extensin signature 409 430 - -
Bpe04g00037 568 PRINTS Proline rich extensin signature 377 393 - -
Bpe04g00037 568 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 34 463 - -
Bpe04g00037 568 SUPERFAMILY L domain-like 52 333 - -
Bpe04g00037 568 Gene3D Ribonuclease Inhibitor 216 369 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00521 Bpe-Chr1:3372460 Bpe04g00037 Bpe-Chr4:371105 2.00E-173 dispersed
Bpe04g00037 Bpe-Chr4:371105 Bpe08g00506 Bpe-Chr8:3354068 6.64E-93 dispersed
Bpe04g00037 Bpe-Chr4:371105 Bpe08g00463 Bpe-Chr8:2974154 4.68E-171 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00037 - - qlo:115970762 546.199