Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00043 ATGCTGCGTTCATCCACAAGGCAAGCAAATATGAATAAAGAGAATACTGCTGCCAATGTCGAAGAAACTATTGTCCGCGTCACACGTGCTAGGGCTAAAGCCTTAAGTACAACAGCCGGGACTGTCCACTCCTCCAGACCTCCTTTGAAGGATACAAAGAATGTCTCCCGAGCAAGTTTTAAAAGAGCAGCTGCAGATGAGAAGAAAATTTCTGCACCTACTACTGCTGTGCTTCAACGTAAGAGGAAAGCAGTCCTTGGAGATGTAACTAACACCTTTTCTGAAAGTTCACATGCTACCTGTATAAATGCTTCTAAAATACAAATTACCAAGTCGACTGTAAGTGGTTCTACAAAATTAGGTGCAAAGATGCCAATGGATGTTTCTGTAAAAATTGCTGAGGTACCTGTCGACCCAAAGACAAAATTAGCTGACGATTTATCAAAAATAAGGATGGCAGAGCTGGAAGAGATTACTTTGAGGACTGAGCAAAAAGAAAATATTCTGCTAAGTACGTACCCTTGCATTAAAAGTGGTTTAGCTGATCTGAAACTTCCTATACCTGCTGGACTGGAAAGATCTCAAAACAAAGAAGACGTTATGCTTTGCAAGAATATGGAAGCCTCAAATCACCTTTGCATCGTGGATATTGATTCAAGATCAAAAGATCCCCAAGCATGCAGTTTATACGCCCCTGATATATACAAGATAATACATGTAACAGAGCTTGATCAAATGCCATCAACTAACTATATGAAACAGTTGCAGCGCGATGTTACTGCAAACATGCGAGGAATTCTGATTGATTGGCTAGTTGAGGTATCCGAAGAGTATAAATTGGTTCCTGACACACTTTATCTTACTACAAATATCATTGATCGATTTCTCTCCAAAAAATACCTTGAAAAACAAAAATTGCAACTCCTTGGTGTTACCTGCATGCTAATTGCCTCGAAATATGAAGAAATATGTTCACCACGGGTGGAAGAATTCTGTTTCATTACTGACAGCACTTACACAAAAGAACAGGTGTTGGAGATGGAGAGCGAAGTCTTGAACTTATTGCACTTTCAGCTATCAGTTCCTACGACAAAAACTTTTGTTAGGAGATTTATTCAAGTAGCACAAGCTTGTTTAAAGGTTCCTTGTGTCGAATTAGAGTTTTTGGCTAACTATTTAGCAGAGTTGACTCTTGTTGAGTATAAGTTCTTAAAGTTTCTGCCTTCTCTGATAGCCGCATCTGCAGTGTTTCTCGCCAAATGGACAATTAACCAATCAAATCATCCTTGGAGTCCAACTCTAGCGCATTATACAACATACAACACTTCAGAGCTGAAAACTACAGTAATTGCCCTCGAAAGTTTACAACTGAACGCCGATGGTTCCTCCTTAAATGCCATTCGTGAGAAGTACAAACAACAAAAGTTCAAATGCGTAGCAGCATTCACTTCAGCACAATCAGTCCAAACGCTTTTCTGA 1479 39.62 MLRSSTRQANMNKENTAANVEETIVRVTRARAKALSTTAGTVHSSRPPLKDTKNVSRASFKRAAADEKKISAPTTAVLQRKRKAVLGDVTNTFSESSHATCINASKIQITKSTVSGSTKLGAKMPMDVSVKIAEVPVDPKTKLADDLSKIRMAELEEITLRTEQKENILLSTYPCIKSGLADLKLPIPAGLERSQNKEDVMLCKNMEASNHLCIVDIDSRSKDPQACSLYAPDIYKIIHVTELDQMPSTNYMKQLQRDVTANMRGILIDWLVEVSEEYKLVPDTLYLTTNIIDRFLSKKYLEKQKLQLLGVTCMLIASKYEEICSPRVEEFCFITDSTYTKEQVLEMESEVLNLLHFQLSVPTTKTFVRRFIQVAQACLKVPCVELEFLANYLAELTLVEYKFLKFLPSLIAASAVFLAKWTINQSNHPWSPTLAHYTTYNTSELKTTVIALESLQLNADGSSLNAIREKYKQQKFKCVAAFTSAQSVQTLF 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 416855 421943 - Bpe014767.1 Bpe04g00043 101852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00043 492 MobiDBLite consensus disorder prediction 36 52 - -
Bpe04g00043 492 PIRSF Cyclin_A_B_D_E 3 491 IPR039361 -
Bpe04g00043 492 Gene3D - 247 360 - -
Bpe04g00043 492 SMART Cyclin_C_2 362 485 IPR004367 -
Bpe04g00043 492 CDD CYCLIN 360 444 IPR013763 -
Bpe04g00043 492 CDD CYCLIN 263 352 IPR013763 -
Bpe04g00043 492 SMART cyclin_7 269 353 IPR013763 -
Bpe04g00043 492 SMART cyclin_7 366 454 IPR013763 -
Bpe04g00043 492 Gene3D - 233 481 - -
Bpe04g00043 492 SUPERFAMILY Cyclin-like 222 359 IPR036915 -
Bpe04g00043 492 Pfam Cyclin, N-terminal domain 233 360 IPR006671 -
Bpe04g00043 492 PANTHER CYCLIN-A2-4 60 492 - -
Bpe04g00043 492 PANTHER CYCLINS 60 492 IPR039361 -
Bpe04g00043 492 Pfam Cyclin, C-terminal domain 362 484 IPR004367 -
Bpe04g00043 492 MobiDBLite consensus disorder prediction 36 56 - -
Bpe04g00043 492 SUPERFAMILY Cyclin-like 361 484 IPR036915 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00582 Bpe04g00043 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00023 Bpe-Chr2:208686 Bpe04g00043 Bpe-Chr4:416855 1.99E-53 dispersed
Bpe02g00444 Bpe-Chr2:2906099 Bpe04g00043 Bpe-Chr4:416855 9.15E-101 dispersed
Bpe04g00043 Bpe-Chr4:416855 Bpe14g00392 Bpe-Chr14:3677387 2.84E-97 dispersed
Bpe15g00922 Bpe-Chr15:19000299 Bpe04g00043 Bpe-Chr4:416855 4.52E-50 dispersed
Bpe06g00715 Bpe-Chr6:17641425 Bpe04g00043 Bpe-Chr4:416855 4.40E-141 transposed
Bpe02g00582 Bpe-Chr2:3771515 Bpe04g00043 Bpe-Chr4:416855 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00043 K06627 - jre:109001789 577.015