Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00043 | ATGCTGCGTTCATCCACAAGGCAAGCAAATATGAATAAAGAGAATACTGCTGCCAATGTCGAAGAAACTATTGTCCGCGTCACACGTGCTAGGGCTAAAGCCTTAAGTACAACAGCCGGGACTGTCCACTCCTCCAGACCTCCTTTGAAGGATACAAAGAATGTCTCCCGAGCAAGTTTTAAAAGAGCAGCTGCAGATGAGAAGAAAATTTCTGCACCTACTACTGCTGTGCTTCAACGTAAGAGGAAAGCAGTCCTTGGAGATGTAACTAACACCTTTTCTGAAAGTTCACATGCTACCTGTATAAATGCTTCTAAAATACAAATTACCAAGTCGACTGTAAGTGGTTCTACAAAATTAGGTGCAAAGATGCCAATGGATGTTTCTGTAAAAATTGCTGAGGTACCTGTCGACCCAAAGACAAAATTAGCTGACGATTTATCAAAAATAAGGATGGCAGAGCTGGAAGAGATTACTTTGAGGACTGAGCAAAAAGAAAATATTCTGCTAAGTACGTACCCTTGCATTAAAAGTGGTTTAGCTGATCTGAAACTTCCTATACCTGCTGGACTGGAAAGATCTCAAAACAAAGAAGACGTTATGCTTTGCAAGAATATGGAAGCCTCAAATCACCTTTGCATCGTGGATATTGATTCAAGATCAAAAGATCCCCAAGCATGCAGTTTATACGCCCCTGATATATACAAGATAATACATGTAACAGAGCTTGATCAAATGCCATCAACTAACTATATGAAACAGTTGCAGCGCGATGTTACTGCAAACATGCGAGGAATTCTGATTGATTGGCTAGTTGAGGTATCCGAAGAGTATAAATTGGTTCCTGACACACTTTATCTTACTACAAATATCATTGATCGATTTCTCTCCAAAAAATACCTTGAAAAACAAAAATTGCAACTCCTTGGTGTTACCTGCATGCTAATTGCCTCGAAATATGAAGAAATATGTTCACCACGGGTGGAAGAATTCTGTTTCATTACTGACAGCACTTACACAAAAGAACAGGTGTTGGAGATGGAGAGCGAAGTCTTGAACTTATTGCACTTTCAGCTATCAGTTCCTACGACAAAAACTTTTGTTAGGAGATTTATTCAAGTAGCACAAGCTTGTTTAAAGGTTCCTTGTGTCGAATTAGAGTTTTTGGCTAACTATTTAGCAGAGTTGACTCTTGTTGAGTATAAGTTCTTAAAGTTTCTGCCTTCTCTGATAGCCGCATCTGCAGTGTTTCTCGCCAAATGGACAATTAACCAATCAAATCATCCTTGGAGTCCAACTCTAGCGCATTATACAACATACAACACTTCAGAGCTGAAAACTACAGTAATTGCCCTCGAAAGTTTACAACTGAACGCCGATGGTTCCTCCTTAAATGCCATTCGTGAGAAGTACAAACAACAAAAGTTCAAATGCGTAGCAGCATTCACTTCAGCACAATCAGTCCAAACGCTTTTCTGA | 1479 | 39.62 | MLRSSTRQANMNKENTAANVEETIVRVTRARAKALSTTAGTVHSSRPPLKDTKNVSRASFKRAAADEKKISAPTTAVLQRKRKAVLGDVTNTFSESSHATCINASKIQITKSTVSGSTKLGAKMPMDVSVKIAEVPVDPKTKLADDLSKIRMAELEEITLRTEQKENILLSTYPCIKSGLADLKLPIPAGLERSQNKEDVMLCKNMEASNHLCIVDIDSRSKDPQACSLYAPDIYKIIHVTELDQMPSTNYMKQLQRDVTANMRGILIDWLVEVSEEYKLVPDTLYLTTNIIDRFLSKKYLEKQKLQLLGVTCMLIASKYEEICSPRVEEFCFITDSTYTKEQVLEMESEVLNLLHFQLSVPTTKTFVRRFIQVAQACLKVPCVELEFLANYLAELTLVEYKFLKFLPSLIAASAVFLAKWTINQSNHPWSPTLAHYTTYNTSELKTTVIALESLQLNADGSSLNAIREKYKQQKFKCVAAFTSAQSVQTLF | 492 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 416855 | 421943 | - | Bpe014767.1 | Bpe04g00043 | 101852 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00043 | 492 | MobiDBLite | consensus disorder prediction | 36 | 52 | - | - | |
Bpe04g00043 | 492 | PIRSF | Cyclin_A_B_D_E | 3 | 491 | IPR039361 | - | |
Bpe04g00043 | 492 | Gene3D | - | 247 | 360 | - | - | |
Bpe04g00043 | 492 | SMART | Cyclin_C_2 | 362 | 485 | IPR004367 | - | |
Bpe04g00043 | 492 | CDD | CYCLIN | 360 | 444 | IPR013763 | - | |
Bpe04g00043 | 492 | CDD | CYCLIN | 263 | 352 | IPR013763 | - | |
Bpe04g00043 | 492 | SMART | cyclin_7 | 269 | 353 | IPR013763 | - | |
Bpe04g00043 | 492 | SMART | cyclin_7 | 366 | 454 | IPR013763 | - | |
Bpe04g00043 | 492 | Gene3D | - | 233 | 481 | - | - | |
Bpe04g00043 | 492 | SUPERFAMILY | Cyclin-like | 222 | 359 | IPR036915 | - | |
Bpe04g00043 | 492 | Pfam | Cyclin, N-terminal domain | 233 | 360 | IPR006671 | - | |
Bpe04g00043 | 492 | PANTHER | CYCLIN-A2-4 | 60 | 492 | - | - | |
Bpe04g00043 | 492 | PANTHER | CYCLINS | 60 | 492 | IPR039361 | - | |
Bpe04g00043 | 492 | Pfam | Cyclin, C-terminal domain | 362 | 484 | IPR004367 | - | |
Bpe04g00043 | 492 | MobiDBLite | consensus disorder prediction | 36 | 56 | - | - | |
Bpe04g00043 | 492 | SUPERFAMILY | Cyclin-like | 361 | 484 | IPR036915 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g00582 | Bpe04g00043 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00023 | Bpe-Chr2:208686 | Bpe04g00043 | Bpe-Chr4:416855 | 1.99E-53 | dispersed | |
Bpe02g00444 | Bpe-Chr2:2906099 | Bpe04g00043 | Bpe-Chr4:416855 | 9.15E-101 | dispersed | |
Bpe04g00043 | Bpe-Chr4:416855 | Bpe14g00392 | Bpe-Chr14:3677387 | 2.84E-97 | dispersed | |
Bpe15g00922 | Bpe-Chr15:19000299 | Bpe04g00043 | Bpe-Chr4:416855 | 4.52E-50 | dispersed | |
Bpe06g00715 | Bpe-Chr6:17641425 | Bpe04g00043 | Bpe-Chr4:416855 | 4.40E-141 | transposed | |
Bpe02g00582 | Bpe-Chr2:3771515 | Bpe04g00043 | Bpe-Chr4:416855 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00043 | K06627 | - | jre:109001789 | 577.015 |