Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00078 | TGCAGAGGCTGTGGAAAGCTTGTGAAGCCTGCTTCCATGGAGGACAGGAATCTTCTGTTTAATAAGTACGAAATTGGGAGGTTATTAGGGAAAGGAACTTTTGCCAAGGTCTATTATGGGAAACACCTGAGCTCCGGCGACAGTGTGGCGATTAAAGTGATTAGTAAGGATCAAGTGAAGAAGGAAGGCATGATGGAGCAAATTACCAGAGAGATCTCCGTTATGCGGCTGGTTCGCCATCCTAATATCGTTGAGCTTAAGGAGGTTATGGCTACAAAGACCAAGATCTTCGTTATCATGGATTATGTCCGCGGCGGGGAGCTTTTCGCGAAGGTTGCTAAAGGAAAGCTTAAAGAAGATCAAGCGAGGAAGTACTTTCAGCAATTGATCAGTGCCGTCGATTTTTGCCATAGCAGGGGAGTCTCTCATCGTGATTTAAAGCCGGAAAATCTGTTGTTGGACGAGAATGAGGACCTGAAAATTTCAGATTTCGGCCTGTCGGCTCTGCCGGAACATCTGCGGAACGACGGTCTTCTTCACACGCAGTGCGGTACCCCAGCGTACGTGGCGCCGGAGATTCTTAGAAAAAAAGGCTATGACGGTGGTAAAGCCGATATATGGTCCTGCGGTGTTATTCTTTATGTACTCCTCGCCGGGTTTCTTCCGTTTCGGTCTGAGAATCTTACGAAGATGTACACAAAGGTTTTCAAGGCGGAATTTGAGTGTCCACCATGGTTTTCGACTGAATCGAAGCGGTTAGTCTCCAAACTGCTCGTCGTCGATCCCGATAGACGAATAACAATCCCGGCGATTATGCGCGTTCCCTGGTTCCGGAGAGGATTATCGAGGCCATTCGCCTTTTCACCAATAGAAATTCCGGAAAGCAAACCGGAGGAAATACCCGACGGCGAGAGTCCAAAAATATCAACTCCAAAGTTTTTCAATGCCTTCGAAATCGTCTCTTCCATGTGTACTGGATTCGATTTGTCGAACCTGTTCGAGAAGAAGAAAAAGGCAGGGTCGATGTTCACGTCGAGATATTCAGCGACGGCGATCATAACGAAGATCGAGGCGATGGCGAAAGGACTTGACTTTAAAGTTTCAACGTCAAAGGATTTCAAACTGAATTTGCAGGGGCCGTCGGAGGGAAGGAAAGGAAAGCTCTCAGTGACGGCGGAGGTGTTCGAGGCGGCTCCGGAGGTAGCCATCGTAGAATTCTCGAAAACTTCCGGCGACTCGTTGGAATACGCAAAGTTTTGTGAAGAAGAGGTTCGACCGGCATTAAAAGACATAGTGTGGAGCTGGCAAGGTGACTGCGTTTCCAAAAGTGAAAAGCCGTAG | 1341 | 47.95 | CRGCGKLVKPASMEDRNLLFNKYEIGRLLGKGTFAKVYYGKHLSSGDSVAIKVISKDQVKKEGMMEQITREISVMRLVRHPNIVELKEVMATKTKIFVIMDYVRGGELFAKVAKGKLKEDQARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENEDLKISDFGLSALPEHLRNDGLLHTQCGTPAYVAPEILRKKGYDGGKADIWSCGVILYVLLAGFLPFRSENLTKMYTKVFKAEFECPPWFSTESKRLVSKLLVVDPDRRITIPAIMRVPWFRRGLSRPFAFSPIEIPESKPEEIPDGESPKISTPKFFNAFEIVSSMCTGFDLSNLFEKKKKAGSMFTSRYSATAIITKIEAMAKGLDFKVSTSKDFKLNLQGPSEGRKGKLSVTAEVFEAAPEVAIVEFSKTSGDSLEYAKFCEEEVRPALKDIVWSWQGDCVSKSEKP | 446 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 610135 | 611475 | + | Bpe014801.1 | Bpe04g00078 | 101887 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00078 | 446 | PANTHER | - | 13 | 444 | - | - | |
Bpe04g00078 | 446 | ProSitePatterns | Protein kinases ATP-binding region signature. | 29 | 52 | IPR017441 | GO:0005524 | |
Bpe04g00078 | 446 | SMART | serkin_6 | 23 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe04g00078 | 446 | Pfam | Protein kinase domain | 23 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe04g00078 | 446 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED | 13 | 444 | - | - | |
Bpe04g00078 | 446 | CDD | STKc_SnRK3 | 22 | 276 | - | - | |
Bpe04g00078 | 446 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 141 | 153 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe04g00078 | 446 | Gene3D | Kinase associated domain 1, KA1 | 311 | 434 | - | - | |
Bpe04g00078 | 446 | SUPERFAMILY | Protein kinase-like (PK-like) | 19 | 306 | IPR011009 | - | |
Bpe04g00078 | 446 | CDD | CIPK_C | 315 | 429 | - | - | |
Bpe04g00078 | 446 | Pfam | NAF domain | 311 | 367 | IPR004041 | GO:0007165 | |
Bpe04g00078 | 446 | ProSiteProfiles | Protein kinase domain profile. | 23 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe04g00078 | 446 | Gene3D | Transferase(Phosphotransferase) domain 1 | 13 | 310 | - | - | |
Bpe04g00078 | 446 | ProSiteProfiles | NAF domain profile. | 309 | 334 | IPR018451 | GO:0007165 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00078 | Bpe-Chr4:610135 | Bpe11g01580 | Bpe-Chr11:11867642 | 2.30E-174 | dispersed | |
Bpe08g00151 | Bpe-Chr8:818521 | Bpe04g00078 | Bpe-Chr4:610135 | 1.32E-41 | dispersed | |
Bpe14g00911 | Bpe-Chr14:6827273 | Bpe04g00078 | Bpe-Chr4:610135 | 9.01E-60 | dispersed | |
Bpe04g01235 | Bpe-Chr4:17973721 | Bpe04g00078 | Bpe-Chr4:610135 | 2.08E-48 | transposed | |
Bpe01g00643 | Bpe-Chr1:4332488 | Bpe04g00078 | Bpe-Chr4:610135 | 3.32E-149 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63274 | PF00069 | Pkinase | 6.20E-74 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00078 | - | - | csv:101213773 | 693.345 |