Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00082 | ATGTCGGACGAGGAGCATAACTTCGAGTCCAAGGCCGATGCTGGAGCCTCTAAGACCTATCCTCAGCAGGCTGGAACTATCCGCAAGAACGGTTACATCGTCATCAAGGGCCGTCCCTGCAAGGTTGTTGAGGTTTCTACTTCCAAGACAGGGAAGCACGGACATGCAAAATGCCACTTTGTGGCTATTGATATTTTTACTGCCAAGAAACTTGAGGATATCGTCCCATCATCCCACAACTGTGATGTTCCTCATGTTACTCGCACTGATTATCAGCTGATAGACATATCTGAAGATGGATTTGTAAGTATTCTGCAATTTCTTTCCCATTTCGCCTCACACTTGGCAACTCATGCTTTTTGGAGATTTATTCAGATTAAGGAAGGATTTGCTGAGGGGAAGGACCTTGTGCTGACGGTCATGTCATCAATGGGAGAAGAACAAATATGTGCCCTCAAGGACATTGGTCCCAAGAACTAA | 480 | 45.62 | MSDEEHNFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSILQFLSHFASHLATHAFWRFIQIKEGFAEGKDLVLTVMSSMGEEQICALKDIGPKN | 159 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 630180 | 631983 | + | Bpe014805.1 | Bpe04g00082 | 101891 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00082 | 159 | SMART | eIF_5a_2 | 85 | 153 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bpe04g00082 | 159 | PANTHER | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | 127 | 155 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bpe04g00082 | 159 | PANTHER | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | 1 | 105 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bpe04g00082 | 159 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Bpe04g00082 | 159 | PANTHER | BNAA07G09420D PROTEIN | 127 | 155 | - | - | |
Bpe04g00082 | 159 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 125 | 153 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bpe04g00082 | 159 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 85 | 106 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bpe04g00082 | 159 | TIGRFAM | eIF_5A: translation elongation factor IF5A | 17 | 152 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bpe04g00082 | 159 | PANTHER | BNAA07G09420D PROTEIN | 1 | 105 | - | - | |
Bpe04g00082 | 159 | SUPERFAMILY | Nucleic acid-binding proteins | 86 | 155 | IPR012340 | - | |
Bpe04g00082 | 159 | PIRSF | Transl_init_eIF5A | 1 | 156 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Bpe04g00082 | 159 | ProSitePatterns | Eukaryotic initiation factor 5A hypusine signature. | 50 | 57 | IPR019769 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Bpe04g00082 | 159 | Gene3D | - | 124 | 157 | IPR012340 | - | |
Bpe04g00082 | 159 | Gene3D | - | 86 | 114 | IPR012340 | - | |
Bpe04g00082 | 159 | Gene3D | - | 1 | 85 | IPR014722 | - | |
Bpe04g00082 | 159 | SUPERFAMILY | Translation proteins SH3-like domain | 15 | 93 | IPR008991 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g00536 | Bpe04g00082 | CCT | |
Bpe02g01262 | Bpe04g00082 | CCT | |
Bpe04g00082 | Bpe14g00600 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00082 | Bpe-Chr4:630180 | Bpe10g00890 | Bpe-Chr10:14632518 | 4.45E-94 | dispersed | |
Bpe14g00600 | Bpe-Chr14:4994417 | Bpe04g00082 | Bpe-Chr4:630180 | 2.08E-31 | wgd | |
Bpe02g01262 | Bpe-Chr2:16078949 | Bpe04g00082 | Bpe-Chr4:630180 | 1.25E-89 | wgd | |
Bpe02g00536 | Bpe-Chr2:3464645 | Bpe04g00082 | Bpe-Chr4:630180 | 5.07E-97 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00082 | K03263 | - | mnt:21396395 | 266.159 |