Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00089 | ATGGGCATATACCTTAGCAGCCCCAAAACTGATAAGTTCTCGGAAGATGGTGAAAATGAAAGGCTTAAATATGGGCTATCCTCAATGCAAGGCTGGCGTGCTACAATGGAAGATGCTCATGCTGCATATCCTGATCTGGATGTGAATACATCATTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTAGTTGCCAAATTCTGCAGCAAGTATCTTCACCAGCAAGTGCTGAAGAGTGAAGCCTATGCTGCTGGAGATATTGGAACTTCTGTGCAGAAAGCATTTCTTAGAATGGATGAAATGATGCAAGGACAAAGGGGTTGGAGAGAATTGGCTGTTTTGGGTGATAAAATAAATAAGTTTTCTGGGATGATAGAAGGGTTGATTTGGTCTCCAAGAAGCCGAAACAGTAGTGGAAATGCCCAAGTTGATGATTGGGCTCCTGAGGAGGGTCCACACTCTGATTTTACTGGCCCAAATTCAGGCAGCACAGCTTGTGTTGCAATCATCCAAAACACCCGACTTGTGGTTGCAAATGCTGGTGATTCTCGCTGTGTATTATCAAGGAAGGGTCAGGCTTACAATCTGTCTCGAGATCACAAACCAGATCTCGAGGTTGAGAAGGATAGAATTTTAAAAGCTGGTGGATTTATTCACGCTGGCCGAATCAATGGCAGTTTGAACCTTGCAAGAGCTATTGGTGATGCAGAATTCAAGCAAAATAAAATTTTACCCGTTGAAAGTCAGATTGTAACTGCAAATCCTGAAGTAATCACAGTTGAGCTCTGTGAAGACGACGAATTTATAGTGCTTGCATGTGATGGCATCTGGGATTGCATGTCGAGCCAGCAAGTGGTTGATTTTATACATGAACAACTGAGGACGGAAAACAAACCATCAGGAGTGTGCGAAAGAATGCTGGATCGATGCTTGGCTCCGAGAGCCGGGGGCGAGGGATGTGACAACATGACCATCATCGTTGTTCAGTTTAAGAAGCAGCATCTTCTTCCCAACTCTTAA | 1020 | 43.82 | MGIYLSSPKTDKFSEDGENERLKYGLSSMQGWRATMEDAHAAYPDLDVNTSFFGVYDGHGGKVVAKFCSKYLHQQVLKSEAYAAGDIGTSVQKAFLRMDEMMQGQRGWRELAVLGDKINKFSGMIEGLIWSPRSRNSSGNAQVDDWAPEEGPHSDFTGPNSGSTACVAIIQNTRLVVANAGDSRCVLSRKGQAYNLSRDHKPDLEVEKDRILKAGGFIHAGRINGSLNLARAIGDAEFKQNKILPVESQIVTANPEVITVELCEDDEFIVLACDGIWDCMSSQQVVDFIHEQLRTENKPSGVCERMLDRCLAPRAGGEGCDNMTIIVVQFKKQHLLPNS | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 656553 | 660937 | - | Bpe014811.1 | Bpe04g00089 | 101898 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00089 | 339 | PANTHER | PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED | 1 | 335 | - | - | |
Bpe04g00089 | 339 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 330 | IPR001932 | - | |
Bpe04g00089 | 339 | SMART | PP2C_4 | 11 | 328 | IPR001932 | - | |
Bpe04g00089 | 339 | SUPERFAMILY | PP2C-like | 3 | 331 | IPR036457 | - | |
Bpe04g00089 | 339 | CDD | PP2Cc | 23 | 330 | IPR001932 | - | |
Bpe04g00089 | 339 | MobiDBLite | consensus disorder prediction | 135 | 158 | - | - | |
Bpe04g00089 | 339 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 335 | IPR015655 | GO:0004722|GO:0006470 | |
Bpe04g00089 | 339 | ProSitePatterns | PPM-type phosphatase domain signature. | 52 | 60 | IPR000222 | GO:0043169 | |
Bpe04g00089 | 339 | Pfam | Protein phosphatase 2C | 23 | 103 | IPR001932 | - | |
Bpe04g00089 | 339 | Pfam | Protein phosphatase 2C | 158 | 315 | IPR001932 | - | |
Bpe04g00089 | 339 | Gene3D | - | 1 | 331 | IPR036457 | - | |
Bpe04g00089 | 339 | SMART | PP2C_SIG_2 | 28 | 330 | IPR001932 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g01265 | Bpe04g00089 | CCT | |
Bpe02g01265 | Bpe04g00089 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00089 | Bpe-Chr4:656553 | Bpe06g00669 | Bpe-Chr6:17370604 | 0 | dispersed | |
Bpe01g00628 | Bpe-Chr1:4185663 | Bpe04g00089 | Bpe-Chr4:656553 | 1.09E-34 | wgd | |
Bpe02g01265 | Bpe-Chr2:16086942 | Bpe04g00089 | Bpe-Chr4:656553 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00089 | K17499 | - | jre:109001007 | 590.112 |