Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00100 GATAACATGGGCTATCTGAATTCAGTCTTGTCGTGTTCGAGCCAGGTTCGTGCCGCCGACGAAGCACCTGTAAGCGGCGGTGACCTCAGCCAAAATGGAAAGTTCAGCTATGGATATGCGAGCTCTCCAGGGAAACGGTCTTCAATGGAAGATTTTTATGAGACACGAATAGATGGCGTTGATGGGGAAATAGTAGGCCTTTTTGGCGTTTTTGACGGTCATGGTGGTGCACGGGCTGCTGAGTATGTGAAGCAAAACTTGTTTAGTAATTTGATCCAGCACCCTAAGTTCATTTCTGATACTAAATCTGCTATAGCTGATGCCTACAACCATACAGACTCAGAGTTTCTAAAATCAGAAAATAATCAGAACAGGGATGCTGGATCGACTGCTTCCACTGCTATTTTAGTTGGTAACCGTTTGCTTGTTGCTAATGTTGGGGATTGCAGAGCTGTCATATGCCGTGGTGGAAATGTGCTTGATACCCGCTTTCAAAACTTTTTTTTTTTTCATAATTTTGTAGCTATTGCTGTCTCACGAGACCACAAACCCAATCAATCAGATGAAAGACAACGAATTGAAGATGCTGGAGGATTTGTTGTGTGGGCAGGAACTTGGAGAGTTGGAGGAGTTCTTGCTGTTTCACGTGCATTTGGTGATAGGCTGTTGAAGCAATATGTTGTCGCTGATCCAGAAATTCAGGAGGAAAAGGTAGACAGCTCCCTTGAATTTCTCATTCTTGCAAGTGATGGACTGTGGGATGTTGTATCTAACGAGGAGGCAGTTGCGATGATAAAACCAATCCAGGACCCAGAGGAGGCCGCCAAAAGGTTGATGCAGGAAGCATATCTGAAAGGCAGTGCCGATAACATTACCTGTGTTGTTGTACGTTTCTTGGACAGTCCCGGTGCTACCTCTTGCGAAACTTCCGAGTAA 936 44.98 DNMGYLNSVLSCSSQVRAADEAPVSGGDLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIQHPKFISDTKSAIADAYNHTDSEFLKSENNQNRDAGSTASTAILVGNRLLVANVGDCRAVICRGGNVLDTRFQNFFFFHNFVAIAVSRDHKPNQSDERQRIEDAGGFVVWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIQDPEEAAKRLMQEAYLKGSADNITCVVVRFLDSPGATSCETSE 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 714252 717989 + Bpe014821.3 Bpe04g00100 101909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00100 311 PANTHER ALPHABET, ISOFORM E-RELATED 5 305 - -
Bpe04g00100 311 Pfam Protein phosphatase 2C 65 291 IPR001932 -
Bpe04g00100 311 Gene3D - 28 301 IPR036457 -
Bpe04g00100 311 ProSiteProfiles PPM-type phosphatase domain profile. 36 298 IPR001932 -
Bpe04g00100 311 SMART PP2C_SIG_2 47 298 IPR001932 -
Bpe04g00100 311 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Bpe04g00100 311 CDD PP2Cc 35 298 IPR001932 -
Bpe04g00100 311 SMART PP2C_4 26 296 IPR001932 -
Bpe04g00100 311 SUPERFAMILY PP2C-like 30 298 IPR036457 -
Bpe04g00100 311 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 5 305 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00524 Bpe04g00100 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00029 Bpe-Chr2:230685 Bpe04g00100 Bpe-Chr4:714252 2.07E-49 dispersed
Bpe04g00100 Bpe-Chr4:714252 Bpe08g00594 Bpe-Chr8:4303300 3.08E-66 dispersed
Bpe06g00452 Bpe-Chr6:15896782 Bpe04g00100 Bpe-Chr4:714252 4.71E-23 dispersed
Bpe14g00296 Bpe-Chr14:2943164 Bpe04g00100 Bpe-Chr4:714252 2.51E-50 dispersed
Bpe03g00180 Bpe-Chr3:2211240 Bpe04g00100 Bpe-Chr4:714252 4.45E-109 transposed
Bpe02g00524 Bpe-Chr2:3410677 Bpe04g00100 Bpe-Chr4:714252 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00100 K17506 - gmx:100795017 518.85