Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00109 ATGAAGAAATCTTTTAAGGACGTAGACAATGTTTTATACGACTGGACGGATTCACCCTCTTCAGATTATTGTGTTTGGAGAGGCATCGAGTGCGACAATATCACCTTCACCGTGGTTGCTCTCAATCTTTCAGGTTTAAACCTTGATGGAGAGATTTCATCAGCAATCGGTGACCTCAAAAGCCTCATAACCATTGACTTGAGAGGAAATCGTCTCTCTGGGCAAATTCCAGACGAGATTGGTGACTGTTCTTTGTTGAGGAATCTAGACTTGTCATTCAATGATATATATGGAGATATACCGTTTTCTATCTCTAAGTTGAAGCAACTGGAAATGATAGTTTTGAAAAGCAATCGCTTGATCGGACCAATTCCCTCTACTCTATCTCAAATTCCAAATCTGAAGGTTTTAGATCTTGCTCAGAATAATCTAAGCGGAGAAATTCCAAGGCTGCTATACTGGAATGAAGTGCTGCAGTATCTGGGATTACGAGGAAATAATCTGGTTGGTAATCTGTCTCCTGATATTTGTCAACTTACAGGGTTGTGGTACTTTGATGTGAGAAACAACAGTTTGACAGGAAGTATTCCACCAAATATAGGGAATTGCACTGCCTTCCAGGTTTTAGACCTATCATACAATCAGCTTACTGGAGAGATTCCATTCAACATTGGTTTCCTACAAGTTGCCACTCTGTCACTGCAAGGAAATCAACTTTCTGGTCAGATACCTGCTGTCATTGGGTTGATGCAGGCACTTGCAGTGTTAGATCTTAGCTGCAACATGTTAAGTGGTTCCATTCCTCCTATCTTGGGAAACTTGACCTACACTGAGAAATTGTACTTGCATGGCAACAAGCTAAGCGGTCCCATTCCTTTGGAGCTTGGGAATATGACTAAGCTTCATTACCTGGAATTGAATGACAATCAATTAACAGGGCATATTCCTGCGGAGCTTGGAAAGCTTACTGATTTGTTTGATCTAAACATAGCCAATAACAGACTTGAAGGACCTATACCCTACAATCTTAGTTCATGTACAAATCTGAACAGTCTAAATGTACATGGAAACAAGTTGAATGGCTCCATTCCTCCTGCTTTTCAAAGGCTAGAGAGTATGACTTATCTAAATCTCTCTTCAAACTTTCTTTGGGGCTCCATTCCAATTGAGCTGTCCAGGATTGGTAACTTGGACACTTTGGATATATCCAGTAACAAAATTAGTGGATCAATTCCTTCTTCCCTCGGCAACCTCGAGCACCTCCTTAAGTTGAACTTAAGCAGAAACGGCTTAACTGGATATATCCCGGCGGAATTTGGTAATCTAAGAAGTGTTATGGTGATAGATCTTTCCGACAATCATCTCTCAGGGCCGATTCCTCAAGAATTTAGTCAGCTTCAGAACATCTTTTCCTTGAGACTGGAAAACAACAATCTGTCTGGGGATGTGTTGTCTTTGATTAACTGCCTGAGTTTAACTGAATTGAACGTATCTTACAATAACTTAGCTGGTGTTATTCCAACTAGCAATAACTTCTCAAGATTCCCATTTGAGAGTTTCATTGGCAATCCTGATCTCTGTGGATATTGGCTGAATTATCCATGCCTTGAATCTCGATCATCAGAGAGAGTCACTATATCTAAAGCAGCAATCATAGGCATTGCTCTTGGTGGCCTCGTGATTCTTCTCATGATCCTCTTGGCTGCATTTCGACCGAACAACACAACTACATTTCCTGATGGATCAATTGACAAACCGGTTAATTATTCAACCCCAAAACTAGTGATTTTGCATATGAACATGGCACTTCATGTATATGAAGACATTATGAGAATGACCGAAAATTTGAGTGAAAAGTACATAATTGGGTACGGGGCATCAAGTACAGTATACAAATGTGTTCTTAAAAACTGCAAACCGGTGGCCATCAAAAGACTATACTCCCACTATCCCCAGAGTCTGAAAGAATTCGAAACTGAACTTGAGACGGTGGGAAGCATCAAGCACCGAAATCTGGTCAGCCTCCAGGGTTATTCCTTGTCTCCTTACGGCAACCTTCTCTTCTACGACTATATGGAAAATGGCAGTCTTTGGGATCTTCTACACGGACCCACGAAAAAGAAAAAACTTGGTTGGGACACTAGGCTCAAGATTGCGCTTGGAGCGGCTCAAGGCCTTTCATATCTACACCATGACTGTAGTCCGAGGATCATCCACAGAGATGTCAAATCATCTAATATTCTTTTGGACAAGGATTTTGAGCCTCATCTTACGGACTTTGGCATAGCCAAGATCTTATGCACCTCTAAAACTTATACGTCCACCTATATTATGGGCACGATTGGCTATATTGACCCCGAGTATGCTCGAACGTCCCGACTCACGGAGAAATCTGATGTTTACAGTTATGGCATTGTGTTGCTTGAATTGCTCACAGGAAGAAAAGCTGTGGACAATGAGTCAAATCTCCATCATCTTATCTTATCGAAGACAGCCAACAATGCTGTTATGGAGACAGTTGATCCCGAGATTACTTCTACGTGCAGGGACGATCTCGGAGTGGTGAAGAAAGTTTTTCAACTTGCTCTTCTATGCACCAGACGACAGCCCTCTGATCGCCCAACAATGCATGAAGTGACCCGAGTACTCGGAAGTCTTGTGCCGACCCCAGACCCAGCAAAACAAGGAGGGGTAGCGGCTAACATTGTGCTTCCACTCGGACCAACTTCCAAAGGACCGTGCTACGTGGACGAGTATGCAAATTTGAAAACTCCACACATGGTTCATTGCCCATCAATCAGCACGTCCGACGCCCAACTCTTCCTCAAGTTTGGGGAGGTAATATCTCAGAACAGCGAGTGTTGA 2865 42.44 MKKSFKDVDNVLYDWTDSPSSDYCVWRGIECDNITFTVVALNLSGLNLDGEISSAIGDLKSLITIDLRGNRLSGQIPDEIGDCSLLRNLDLSFNDIYGDIPFSISKLKQLEMIVLKSNRLIGPIPSTLSQIPNLKVLDLAQNNLSGEIPRLLYWNEVLQYLGLRGNNLVGNLSPDICQLTGLWYFDVRNNSLTGSIPPNIGNCTAFQVLDLSYNQLTGEIPFNIGFLQVATLSLQGNQLSGQIPAVIGLMQALAVLDLSCNMLSGSIPPILGNLTYTEKLYLHGNKLSGPIPLELGNMTKLHYLELNDNQLTGHIPAELGKLTDLFDLNIANNRLEGPIPYNLSSCTNLNSLNVHGNKLNGSIPPAFQRLESMTYLNLSSNFLWGSIPIELSRIGNLDTLDISSNKISGSIPSSLGNLEHLLKLNLSRNGLTGYIPAEFGNLRSVMVIDLSDNHLSGPIPQEFSQLQNIFSLRLENNNLSGDVLSLINCLSLTELNVSYNNLAGVIPTSNNFSRFPFESFIGNPDLCGYWLNYPCLESRSSERVTISKAAIIGIALGGLVILLMILLAAFRPNNTTTFPDGSIDKPVNYSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQSLKEFETELETVGSIKHRNLVSLQGYSLSPYGNLLFYDYMENGSLWDLLHGPTKKKKLGWDTRLKIALGAAQGLSYLHHDCSPRIIHRDVKSSNILLDKDFEPHLTDFGIAKILCTSKTYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTANNAVMETVDPEITSTCRDDLGVVKKVFQLALLCTRRQPSDRPTMHEVTRVLGSLVPTPDPAKQGGVAANIVLPLGPTSKGPCYVDEYANLKTPHMVHCPSISTSDAQLFLKFGEVISQNSEC 954
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 752715 758356 - Bpe014830.1 Bpe04g00109 101918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00109 954 ProSiteProfiles Leucine-rich repeat profile. 133 155 IPR001611 GO:0005515
Bpe04g00109 954 Gene3D Ribonuclease Inhibitor 1 154 IPR032675 -
Bpe04g00109 954 ProSiteProfiles Protein kinase domain profile. 616 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00109 954 Gene3D Ribonuclease Inhibitor 265 538 IPR032675 -
Bpe04g00109 954 ProSitePatterns Protein kinases ATP-binding region signature. 622 644 IPR017441 GO:0005524
Bpe04g00109 954 SUPERFAMILY L domain-like 225 527 - -
Bpe04g00109 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Bpe04g00109 954 Pfam Leucine rich repeat 396 455 IPR001611 GO:0005515
Bpe04g00109 954 Pfam Leucine rich repeat 109 168 IPR001611 GO:0005515
Bpe04g00109 954 Pfam Leucine rich repeat N-terminal domain 1 32 IPR013210 -
Bpe04g00109 954 Gene3D Transferase(Phosphotransferase) domain 1 692 893 - -
Bpe04g00109 954 SMART serkin_6 616 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00109 954 Gene3D Ribonuclease Inhibitor 155 264 IPR032675 -
Bpe04g00109 954 Pfam Protein kinase domain 619 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00109 954 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 940 - -
Bpe04g00109 954 SUPERFAMILY L domain-like 18 269 - -
Bpe04g00109 954 Gene3D Phosphorylase Kinase; domain 1 585 691 - -
Bpe04g00109 954 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 1 940 - -
Bpe04g00109 954 CDD STKc_IRAK 622 886 - -
Bpe04g00109 954 SUPERFAMILY Protein kinase-like (PK-like) 593 883 IPR011009 -
Bpe04g00109 954 SMART LRR_typ_2 298 322 IPR003591 -
Bpe04g00109 954 SMART LRR_typ_2 131 155 IPR003591 -
Bpe04g00109 954 SMART LRR_typ_2 59 83 IPR003591 -
Bpe04g00109 954 SMART LRR_typ_2 250 274 IPR003591 -
Bpe04g00109 954 SMART LRR_typ_2 179 203 IPR003591 -
Bpe04g00109 954 SMART LRR_typ_2 418 441 IPR003591 -
Bpe04g00109 954 SMART LRR_typ_2 370 394 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00330 Bpe-Chr3:5231798 Bpe04g00109 Bpe-Chr4:752715 0 dispersed
Bpe04g00109 Bpe-Chr4:752715 Bpe10g00028 Bpe-Chr10:401802 1.26E-166 dispersed
Bpe05g00726 Bpe-Chr5:20761509 Bpe04g00109 Bpe-Chr4:752715 1.52E-94 transposed
Bpe03g01071 Bpe-Chr3:29928962 Bpe04g00109 Bpe-Chr4:752715 3.01E-13 transposed
Bpe02g00511 Bpe-Chr2:3351760 Bpe04g00109 Bpe-Chr4:752715 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63275 PF00069 Pkinase 1.40E-44 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00109 K20718 - rcu:8258591 1615.51