Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00114 ATGGAACGTACCAAGTACGAAGCTTCAGAAGCTGGCGAAATAAGTTTGTCGGAAAAGAAAACGGCGAACGGAGGCGAAGTGGTAGTAGAGATTCCGACAGAAATAGAGGTTTCTTCGAAGCCTATAATAGAGTCTGAAAAGGCAAACCAGTCTGCATCAAAACCCGGAGAAGAACCTGGGGTATATTCTCCTTCCCGATCATCAACAGAGTTAGGCTCTCATTTAACAAAGCCGATGATAATTAGCTCCAGTTCGCCAGAGCAGTCTAGGTACCCTCCGAGCTCGAATAAACCTCCGAAGATTCCTGACTGCAATGAAACAATTATCCGAAAAAGGTCCCTGTCAAGGTCTGTCTACTCTAAACCAAAATCAAGATTTGGGGAAGAACCTTATCGTATTAATTCCAACATGTTTGAAGAAAATTATGTAACCTCGCATGAACGAGTTGGTGCCAATTCCCCCCATGGATACTCCTTTAACCAGACTTCCCCTGGTAACAAATCTCAACCCACTGCAGTAACCCCAAAAACACCATTAATGGCCTCCTCGGACCTTCTGAATGAGTACGACGATGAGGAGGAGATATTTAAGAAAGTCGAGTTGAATAAAGAGAAGCACAAGCGACTCAGACTGAAGATTATAGTTGAGTGGGTTGGAGTTTTATTCATTGTGAGTTGCTTAATAGCGAGCTTAACGTATCAGCCATTGAAAAGCTCAGTGTTTTGGGGTTTAGAGAGCTGGAAATGGTGTCTGTTGATAATAGTCACATTCTGTGGCCTTCTGGTTACTACTTGGTTTATGCACTTCATTGTTTTCTTGATTGAGATTAACTTTTTGCTGAGGAAGAAGGTCTTATATTTCGTCCATGGGTTGAAGAAGACGGTCCAAGTTACCATATGGCTGGCTCTTGTTCTTCTTACATGGATGCTCTTGTTTGATCAACATGATCACAGTGTTTACCGGTCGAAAACTACCAATCTAATGTTGCACGATGTTACAATGACTCTAGCTTCTCTTCTGATTGGAGCATTTTTATGGCTTCTGAAAACTCTATTTCTGAAAATCCTGGCTTCAAAATTTCACGTTAACCAATTTTTCGATCGAATTCAAGAAGCAATCTTTCATCAATATGTTCTGCAGACCCTCTCAGGGCCCCCTCTTATCGAGGAAGCTGAGAGGGTCGGGCGATTATCGAGCATTGGTCAGATGAGTATCAAAAGCTCGAAGAATAATGGGAAGAGAGAGAAGGAGGTGATTGATATGGGAAAGCTTCACAAGATGAAGCAGGAGAAGGTTTCAGCTTGGACCATGAAAGTGTTGGTAGATGCAGTTACCAATTCCGAACTTTCTACAATTTCCCAGGCGCTGGAACAAAGTTTCCAAGATAGAGAAGCCGAGCAACTAGACAGTGAAATTACCAACGAAATGGAGGCAATTGCAGCAGCGTTTAAGATATTCAGAAATGTTGCTCGGCCTGGCAGCAAGCGCATCGAAGAGGACGATCTACTCAGATTCATGATCAAGGAAGAAGTGGAGCTTGTATTTCAATTATTTGATGGATCTGAGACGAGAAAGATAGACAAAACATGTCTTACCAATTGGGTGGTGAAGGTTTACCAAGGGAGAAAAACTCTAGCACATGCTCTGAACGACACAAAAACGGCCGTGAAACAATTGAACAAGCTCGTGACGGGAATCGTAATTGTAGTAACCATCGTCATGTGGCTTTTATTGTTAGAAATAACGACCTCAAAAGTACTTGTTTTCCTCGGTTCTCAGCTCGTTGTAGCCGTTTTCATATTTGGCAACACGTGCAAAACCATTTTCGAGGCTTTGATTTTTGTCTTCGTTATGCATCCATTTGACGTTGGTGATCGATGCCTCATCGACGGTGATCCGATGATGGTGGAAGAAATGAACATCCTAACAACAGTTTTCTTGAAACTAAACAAGCAGAAGGTGTATTATCCAAACTCGGTATTGGCTACAAAGCCTATAGGCAATTATTTCAGGAGCCCAAACATGTCCGACACAGTGCAATTCACGATCGATTTCATGACGCCATTAGAGAGGATCGGAGCTATGAAGGAGAAGATAAAGAGTTATTTGGAGAAAAATCCAACGCAGTGGCAACCCAGCCATAACGTGGTGGTGATGGAGATTGAAAACGTGAATGAGATCAAGATTGCTCTGAATGTGAATCACACGATGAACTTCCAAGACTGGGTCGAGAAGAACAGGAGAAGAAGTGAGCTTGTGATGGAGTTGAAGAAGATATTCCAAGAACTGAACATCAAGTATAATCTTTTGCACCAGAGAGTTCATCTCTGCAACGTCGAAGACAACTGCTTTTCGACCCACTGA 2364 42.51 MERTKYEASEAGEISLSEKKTANGGEVVVEIPTEIEVSSKPIIESEKANQSASKPGEEPGVYSPSRSSTELGSHLTKPMIISSSSPEQSRYPPSSNKPPKIPDCNETIIRKRSLSRSVYSKPKSRFGEEPYRINSNMFEENYVTSHERVGANSPHGYSFNQTSPGNKSQPTAVTPKTPLMASSDLLNEYDDEEEIFKKVELNKEKHKRLRLKIIVEWVGVLFIVSCLIASLTYQPLKSSVFWGLESWKWCLLIIVTFCGLLVTTWFMHFIVFLIEINFLLRKKVLYFVHGLKKTVQVTIWLALVLLTWMLLFDQHDHSVYRSKTTNLMLHDVTMTLASLLIGAFLWLLKTLFLKILASKFHVNQFFDRIQEAIFHQYVLQTLSGPPLIEEAERVGRLSSIGQMSIKSSKNNGKREKEVIDMGKLHKMKQEKVSAWTMKVLVDAVTNSELSTISQALEQSFQDREAEQLDSEITNEMEAIAAAFKIFRNVARPGSKRIEEDDLLRFMIKEEVELVFQLFDGSETRKIDKTCLTNWVVKVYQGRKTLAHALNDTKTAVKQLNKLVTGIVIVVTIVMWLLLLEITTSKVLVFLGSQLVVAVFIFGNTCKTIFEALIFVFVMHPFDVGDRCLIDGDPMMVEEMNILTTVFLKLNKQKVYYPNSVLATKPIGNYFRSPNMSDTVQFTIDFMTPLERIGAMKEKIKSYLEKNPTQWQPSHNVVVMEIENVNEIKIALNVNHTMNFQDWVEKNRRRSELVMELKKIFQELNIKYNLLHQRVHLCNVEDNCFSTH 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 788930 791610 - Bpe014836.1 Bpe04g00114 101923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00114 787 MobiDBLite consensus disorder prediction 153 173 - -
Bpe04g00114 787 MobiDBLite consensus disorder prediction 1 115 - -
Bpe04g00114 787 Pfam Mechanosensitive ion channel 561 766 IPR006685 GO:0016020|GO:0055085
Bpe04g00114 787 SUPERFAMILY Sm-like ribonucleoproteins 610 669 IPR010920 -
Bpe04g00114 787 MobiDBLite consensus disorder prediction 62 91 - -
Bpe04g00114 787 Gene3D - 620 669 IPR023408 -
Bpe04g00114 787 MobiDBLite consensus disorder prediction 154 173 - -
Bpe04g00114 787 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 17 777 IPR016688 -
Bpe04g00114 787 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 17 777 - -
Bpe04g00114 787 PIRSF Memb_At2g17000 19 785 IPR016688 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00114 Bpe-Chr4:788930 Bpe13g00878 Bpe-Chr13:14919180 0 dispersed
Bpe01g00608 Bpe-Chr1:4012706 Bpe04g00114 Bpe-Chr4:788930 0 wgd
Bpe02g00505 Bpe-Chr2:3277672 Bpe04g00114 Bpe-Chr4:788930 4.86E-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00114 K22048 - pvy:116117532 920.228