Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00116 ATGTGCTTGGATGCAGCTGAGGATGGTTCAGCCTCAGAGATTCATCTTCCAGCTGAAATCGATTGGCACATGCTTGACAAATCCAAGTTTTTCTTCCTCGGCGCTGCTCTATTTTCCGGTGTATCGGCTGCGCTATATCCGGTCATCGTGCTAAAGACCCGGCAGCAGGTTTGTCCCAACAAGCTTTCTTGCTTCAACATGTCCTATTCCATCATCCGCCATGAGGGTTTTCGAGGGTTCTACAGAGGTTTTGGTACCTCTTTAATGGGGACAATTCCAGCTCGAGCTCTTTACATGGGATCCCTCGAAATTACCAAGAGTAGCGTCGGCAGTGCGACACTCAGATTCGGCTTTTCAGATACGTCTGCTATGGCGATGGCTAATGCCGCTGCAGGGCTAACCTCAGCCATGGCGGCGCAATTAGTTTGGACTCCAGTTGACGTGGTGAGCCAGAGACTAATGGTCCAAGGTAGCAACAATAGCGGAAAAAGCATCGCCCCTTCTCTCAATTCTCGCAGATACAGCAACGGAGTCGACGCTTTTCGAAAAATCATCAATACCGACGGATTGAGAGGATTGTACAGAGGCTTTGGAATGTCAATATTGACATACGCACCCTCCAACGCCGTTTGGTGGGCTTCTTACTCCGTAGCTCACAGGCTCATCTGGAATGGTCTCAACCAGAATAGTGAAATCCAAGGCCATGTCTATGGCGGGTTTAAGCCAGATTCAAAGACTCTGATTGGAGTTCAGGGGGTAAGTGCAGCCATTGCAAGCGGAGTTTCTGCAATGATAACAATGCCGCTTGACACAATAAAGACGAGACTGCAAGTACTGGACGGAGAAGAAAATGGGCAGAGGCGGCCATTAACAGCATTTCAGACTGTAAAAAACTTGGTGAAGGAAGGTGGATTCCCAGCTTGTTACAGAGGATTAGGACCAAGGTGGGCTTCAATGGCTGTATCTGCAACTACGATGATCACCACTTATGAATTTCTCAAACAGCTTTCAGCTAAAACTTAA 1023 48.09 MCLDAAEDGSASEIHLPAEIDWHMLDKSKFFFLGAALFSGVSAALYPVIVLKTRQQVCPNKLSCFNMSYSIIRHEGFRGFYRGFGTSLMGTIPARALYMGSLEITKSSVGSATLRFGFSDTSAMAMANAAAGLTSAMAAQLVWTPVDVVSQRLMVQGSNNSGKSIAPSLNSRRYSNGVDAFRKIINTDGLRGLYRGFGMSILTYAPSNAVWWASYSVAHRLIWNGLNQNSEIQGHVYGGFKPDSKTLIGVQGVSAAIASGVSAMITMPLDTIKTRLQVLDGEENGQRRPLTAFQTVKNLVKEGGFPACYRGLGPRWASMAVSATTMITTYEFLKQLSAKT 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 804176 805198 - Bpe014838.3 Bpe04g00116 101925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00116 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 339 - -
Bpe04g00116 340 Pfam Mitochondrial carrier protein 252 338 IPR018108 -
Bpe04g00116 340 Pfam Mitochondrial carrier protein 126 223 IPR018108 -
Bpe04g00116 340 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
Bpe04g00116 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Bpe04g00116 340 PRINTS Mitochondrial carrier protein signature 255 277 IPR002067 GO:0055085
Bpe04g00116 340 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Bpe04g00116 340 PRINTS Mitochondrial carrier protein signature 194 212 IPR002067 GO:0055085
Bpe04g00116 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 221 IPR018108 -
Bpe04g00116 340 SUPERFAMILY Mitochondrial carrier 23 333 IPR023395 -
Bpe04g00116 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 336 IPR018108 -
Bpe04g00116 340 Gene3D Mitochondrial carrier domain 28 340 IPR023395 -
Bpe04g00116 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00116 Bpe-Chr4:804176 Bpe10g00696 Bpe-Chr10:13418400 3.10E-162 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00116 K15121 - csv:101213436 511.916