Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00122 ATGGGTGCTTCTGGAAAATGGGTGAAGTCTTTTATAGGTTTCAAAAAGCCCGACAAGGAAGACCATGAAAAACTAAGTGGCAAGAGCAAGAAATGGAAGCTATGGAGAAGCCCATCAGGGGATTTAGGCTCTGCTTGGAAAGGTTTCAAAGGAGGCCGGAGAGCAGCATCTGAGGGATCAGATTCTCCACGCGCGGCTGATGCTTTCACGGCCGCCATGGCTACAGTCCTTCGAGCTCCGCCAAAAGATTTTAGGGTTGTGAAGCAAGAATGGGCGGCTATTCGGATCCAGACTGCCTTCCGTGGCTTCCTGGCAAGGCGTGCCCTGAGGGCGCTGAGAGGCGTGGTGAGGCTTCAAGCTCTTGTTCGCGGCCGTCTGGTGAGAAAGCAAGCCGCTGTGACTCTGAGATGCATGCAAGCGCTGGTTCGAGTCCAAGCCCGAGTGAGGGCCCGTCGAGTGAGAATGTCAATGGAGGGTCAGGCCGTCCAGCAAATCCTAACTGAACATCGAACAAAGGCTGATCTTTTGAAGCAGGCTGAGGCAGGGTGGTGTGACAGTAGGGGAACGTTGGATGATGTCAAGACAAAGCTACACATGAAGAAAGAAGGAGCTTTCAAGAGAGAGAGAGCAATTGCATACTCTCTCGCTCAAAAGCAATGGAAATCAACACCGTCTGCAGTATCTAGAACAAATGCTTCATCTATGAAGAATCAAGAATATGGGAATTTTATCCATCGTGCCAGAGCTCGGCGTCTGCTACAATTATCAATGGCTGCCTACCCATATGAAACCTGTTTGAAGGACAGAGAAGACGTCGGGGCCGTACTTAGCGAGCAAGGGAAGGTGACCTACGAAGGGAATAGCCGGCGGACCAGGGACCCTTCTCACACCCCATACTCTCTACGCTCTAGGAAAAATAAAGTTATTAGTGGTCTGACTACCAAGATTCCTGGTAATGAGGCGACGATATTATCGAAGGAGTTGGCATTCAGATACCGATGTTGCAGCCAAACCACTAACAGATACGCACAACGAGGACTTGCAACAAATTATTCAGATACAACAGAACCAGCAACAACAAATGCAACTTCTCATAGAAAGGAGAAGGAGAAGAAGACGGAGACTGGGACAACTTTGATGTATAATCCAATGTTGGGATTGATGTGA 1167 49.19 MGASGKWVKSFIGFKKPDKEDHEKLSGKSKKWKLWRSPSGDLGSAWKGFKGGRRAASEGSDSPRAADAFTAAMATVLRAPPKDFRVVKQEWAAIRIQTAFRGFLARRALRALRGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQQILTEHRTKADLLKQAEAGWCDSRGTLDDVKTKLHMKKEGAFKRERAIAYSLAQKQWKSTPSAVSRTNASSMKNQEYGNFIHRARARRLLQLSMAAYPYETCLKDREDVGAVLSEQGKVTYEGNSRRTRDPSHTPYSLRSRKNKVISGLTTKIPGNEATILSKELAFRYRCCSQTTNRYAQRGLATNYSDTTEPATTNATSHRKEKEKKTETGTTLMYNPMLGLM 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 834040 841207 + Bpe025577 Bpe04g00122 101931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00122 388 PANTHER IQ-DOMAIN 5-RELATED 1 317 - -
Bpe04g00122 388 SMART iq_5 111 132 IPR000048 GO:0005515
Bpe04g00122 388 SMART iq_5 88 110 IPR000048 GO:0005515
Bpe04g00122 388 Pfam IQ calmodulin-binding motif 91 110 IPR000048 GO:0005515
Bpe04g00122 388 Pfam IQ calmodulin-binding motif 113 130 IPR000048 GO:0005515
Bpe04g00122 388 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 317 - -
Bpe04g00122 388 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
Bpe04g00122 388 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
Bpe04g00122 388 MobiDBLite consensus disorder prediction 351 374 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01543 Bpe-Chr2:18514597 Bpe04g00122 Bpe-Chr4:834040 2.46E-66 dispersed
Bpe04g00122 Bpe-Chr4:834040 Bpe06g00782 Bpe-Chr6:18055828 2.71E-54 dispersed
Bpe02g00495 Bpe-Chr2:3201970 Bpe04g00122 Bpe-Chr4:834040 6.54E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00122 - - zju:107420144 354.369