Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00123 ATGATGATGCCTCTTCAAGTATGGTTTCAGACAGTTCCTCTAGCTGCGGCTTTATTCACTTCGTTGGGAGTAGTTGCAGGGCTCTTGGCTTACTTGTATGCCCCTTACTGGGGTGTGAGAAGGGTCCCTGGTCCGCCGGCTATTCCCTTCGTAGGTCACCTTCCCTTGCTCGCTAAGTACGGCCCCGACGTCTTCTCTGTCCTCTCCAAACGATACGGCCCGATTTTCAGGTTTCATATGGGTAGGCAGCCATTGATAATTGTAGCAGACGCCGAGCTCTGCCGAGAAGTTGGAATTAAGAAATTCAAGGACATTCCTAACAGAAGCATTCCTTCGCCAATTTCAGCTTCCCCTCTTCATCAGAAAGGTCTCTTTTTTACAAGGGATTCAAGATGGTCGTCCATGAGAAACACTATTTTATCGGTCTATCAGCCTTCGCATCTCGCCAGTCTAATCCCGACCATGCAGTCATACATTGAATCCGCGACTCAAAACCTTCATTCGTCTCCTGAAGAAGACATTTCTTTCTCCAACCTTTCCCTCAAATTGGCCACTGACGTGATTGGCCAGGCTGCATTCGGGGTCGACTTTGGCCTAACGAAACCTCAACTGCCACCTGGAAAGTCCGCTCAAGATCAAACAGATAACCAAAATGGTGAAGTTTCAGACTTCATCAATGAACATATATACTCCACGACTCAGCTTAAGATGGATTTATCAGGCTCCTTTTCGATCATCCTGGGTCTACTTATCCCCTTTCTGCAAGAACCATTCAGGCAAATCTTGAAAAGAATACCTGGCACGATGGACTGGAAAGTCGATCGAACAAACCGGAATTTGAGTGGTCGGATTGAGGAAATTGTTGAAAAGAGAACAAAAGATAAAGAAATGGCGGCTTCAAAAGACTTCTTGTCTCTGATTTTGAATGCTAGAGAATCAGAGACTAAGTCAATTTTCACCAGAGACTATCTTGGCGCGGTTACTTATGAGCACTTACTTGCAGGCTCAACTACTACCTCATTTACATTGTCTTCTACTTTGTATTTAGTGGCAGCACATCCGGAAGTCGAGAAGAAGTTACTTGCAGAAATCGATGGATTTGGTCCACCTGATCAAATTCCAACCGCTAATGATCTTCAACTAAAATTCCCATATCTTGATCAGGTGATCAAGGAGTCGATGCGATACTACACTGTTTCACCACTTGTAGCGAGAGAAACATCGAAAGAAGTCGAAATAGGTGGCTATCTTCTTCCCAAGGGGACGTGGGTATGGTTAGCAGTCGGAGTTTTAGCCAAAGATCCTAGAAATTTTCCTGAACCAAGCAAGTTCAAACCAGACAGGTTCGATCCAAACTGCGAGGAAGAGAAACAGAGGCATCCTTATGCCTTGATACCTTTTGGAATTGGCCCGAGAGCCTGCGTTGGCCAGAAGTTTTCTCTGTTGGAACTAAAGCTCTCGTTGATTCATTTGTATCGGAATTACATTTTCCGACACTCTCCTTCGATGGAAAACCCTCTGGAATTTGAGTATGGTAAAACCAGTGACTTGAATAAATTGACAGAAGGGTCTGAGCCAGCACTACTTTTGGAGTCCCCGTTTGAGAAATCTGCTGAGCTGTTGATGAACTTAAACTCATCCATAGATTGCATTTGA 1656 44.75 MMMPLQVWFQTVPLAAALFTSLGVVAGLLAYLYAPYWGVRRVPGPPAIPFVGHLPLLAKYGPDVFSVLSKRYGPIFRFHMGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSRWSSMRNTILSVYQPSHLASLIPTMQSYIESATQNLHSSPEEDISFSNLSLKLATDVIGQAAFGVDFGLTKPQLPPGKSAQDQTDNQNGEVSDFINEHIYSTTQLKMDLSGSFSIILGLLIPFLQEPFRQILKRIPGTMDWKVDRTNRNLSGRIEEIVEKRTKDKEMAASKDFLSLILNARESETKSIFTRDYLGAVTYEHLLAGSTTTSFTLSSTLYLVAAHPEVEKKLLAEIDGFGPPDQIPTANDLQLKFPYLDQVIKESMRYYTVSPLVARETSKEVEIGGYLLPKGTWVWLAVGVLAKDPRNFPEPSKFKPDRFDPNCEEEKQRHPYALIPFGIGPRACVGQKFSLLELKLSLIHLYRNYIFRHSPSMENPLEFEYGKTSDLNKLTEGSEPALLLESPFEKSAELLMNLNSSIDCI 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 835877 838563 - Bpe014843.2 Bpe04g00123 101932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00123 551 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00123 551 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00123 551 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00123 551 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00123 551 PANTHER THROMBOXANE-A SYNTHASE 10 514 - -
Bpe04g00123 551 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00123 551 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00123 551 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00123 551 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00123 551 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00123 551 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00123 551 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00123 551 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Bpe04g00123 551 Pfam Cytochrome P450 43 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00123 551 Gene3D Cytochrome P450 31 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00123 551 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 514 - -
Bpe04g00123 551 SUPERFAMILY Cytochrome P450 35 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00123 Bpe-Chr4:835877 Bpe07g00936 Bpe-Chr7:15246947 8.43E-30 dispersed
Bpe04g00123 Bpe-Chr4:835877 Bpe02g02041 Bpe-Chr2:21997911 1.67E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00123 K20771 - jre:109008872 815.453