Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00136 ATGGGTTCCGATGATGTCTCCACCGGCCTTGTTCTTGGTCTGAGCCACCGTCCCAAAGCAGAGAAATCTCTCAAATCCTGTCATCTGAAAAATATGAGTCCGTCTGCAAATTTTGGAAGTGCCTTTCTCACTTTAGGTTTTTCCGACGAGACCAACCCAATGGCTACCAACTCCCGCGTCAAGAAGCAACTTCCCGACGAACCACATGATGCACTCCGGCGGCAGGCCTCTGCTTCAAACTCATCCAGTTTCAAGCGCGATAGGGACTTCTGCGACGGCGATGAGATAGAAGCAGAGGCTGAGGTGGAGTTAGAGCGAATCTCGTCTAGGCTCAGCGAGGAAGAAGAAGACGGCGCCGGCAGCCCGAGAAAAAAACTGAGACTCACAAAAGATCAATCTGCCATTTTGGAGTACAGCTTCAAAGAGCATGCCACTCTAAACCCCAAACAAAAACAAGAGCTGGCAAGAAGGTTGAGTTTAAGCACAAGACAAGTGGAAGTGTGGTTCCAAAACAGGAGAGCCAGGACTAAGCTGAAGCAAACAGAAGAGAGCTGCGAGCTGTTGAAGAAATGCTGCGAATCACTAACAGAAGAGAACAAGATGTTAAAGAAGGAGCTTCAAGAAATCAAATCAATAAAATCAGCAGCTCATCCGCCATTTTATATGCGGCTCCAAACAGCAAATCTCTCAATGTGTCCTTCTTGCGAGAGAATATGCAGTATCGGCGACGGCTCTTCTCCGACAAGCACTCTCTCCGTTGGTCCAAAATCTAACCTCTGTAATTCCCCTTAA 792 47.85 MGSDDVSTGLVLGLSHRPKAEKSLKSCHLKNMSPSANFGSAFLTLGFSDETNPMATNSRVKKQLPDEPHDALRRQASASNSSSFKRDRDFCDGDEIEAEAEVELERISSRLSEEEEDGAGSPRKKLRLTKDQSAILEYSFKEHATLNPKQKQELARRLSLSTRQVEVWFQNRRARTKLKQTEESCELLKKCCESLTEENKMLKKELQEIKSIKSAAHPPFYMRLQTANLSMCPSCERICSIGDGSSPTSTLSVGPKSNLCNSP 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 920042 921096 - Bpe014855.1 Bpe04g00136 101945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00136 263 Pfam Homeodomain 123 177 IPR001356 GO:0003677
Bpe04g00136 263 PANTHER - 63 249 - -
Bpe04g00136 263 CDD homeodomain 122 180 IPR001356 GO:0003677
Bpe04g00136 263 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 63 249 - -
Bpe04g00136 263 SUPERFAMILY Homeodomain-like 117 180 IPR009057 -
Bpe04g00136 263 MobiDBLite consensus disorder prediction 107 126 - -
Bpe04g00136 263 MobiDBLite consensus disorder prediction 49 89 - -
Bpe04g00136 263 ProSitePatterns 'Homeobox' domain signature. 154 177 IPR017970 GO:0000981|GO:0006355
Bpe04g00136 263 SMART HOX_1 121 183 IPR001356 GO:0003677
Bpe04g00136 263 Coils Coil 178 212 - -
Bpe04g00136 263 MobiDBLite consensus disorder prediction 244 263 - -
Bpe04g00136 263 SMART halz 179 224 IPR003106 GO:0006355|GO:0043565
Bpe04g00136 263 Gene3D - 116 186 - -
Bpe04g00136 263 Coils Coil 97 117 - -
Bpe04g00136 263 ProSiteProfiles 'Homeobox' domain profile. 119 179 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00472 Bpe04g00136 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00136 Bpe-Chr4:920042 Bpe10g00025 Bpe-Chr10:368378 6.60E-62 dispersed
Bpe02g00472 Bpe-Chr2:3063647 Bpe04g00136 Bpe-Chr4:920042 2.46E-133 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21181 PF00046 Homeodomain 1.10E-16 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00136 K09338 - qsu:111996753 232.646