Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00141 ATGGCGCCGTCATTCGATTGGTGGACGAAAGAGAGCCACAGAGGAACCCCCGTCGTTGTTAAGATGGAGAATCCTAACTGGTCCATGGTCGAACTCGAAGGTCCATCAGAAGATTACTTTCTCATCGCAGAATCGCCAGTCGGAGTACGAGAAAAAGGCCGAGGTAAAAACGCTAAACAGCTTACTTGGGTTCTTCTCCTCAAAGCCCACAAAGCCGCCGGTTGTTTAACCTCCATTGGTTCTGCATTTGTCGGACTCACCGCCGCAGTTAGACGGCGCGTCGCTTCGGGTAGAACTGACGCCGATGCCGACAACGACATTGACTGTAGCAGGGAGAAAGAGAACCCTACATTGAAAACCAGGTTTTATTCTTGCATCAAAGTTTTTCTTCTTCTGTCGGTGCTACTTCTAGGGTTTGAGGTTGCTGCCTACTTCAAAGGTTGGCATTTTAGCACTCCCCATCTTCAATTGAGTTATTTGTGGGCAACTCCTTTTGGGGTAAAAGGAACTTTCGACTGGATTTATTCTCAATGGGTCTTATTTCGGGTGGATTATCTTGCTCCTCCTCTCCAGTTCTTAGCCAATGCTTGCATTATCCTCTTCCTCATTCAAAGTTTGGACAGGCTAATTTTGTGTATGGGTTGTTTCTGGATTCGATTCAAGAAGATAAAACCAGCTCCGAAAGAAGCCCCCACCGACGACATTGAATCCGGCGAGAAGGGCTATTTTCCCATGGTTCTTGTTCAGATCCCCATGTGCAACGAAAAGGAGGTTTATCAACAATCAATTGCTGCAGTTTGCAATTTAGACTGGCCAAAATCAAAGCTTCTTATTCAGGTTCTCGACGATTCAGATGACCCAATCACTCAAGTGCTGATCAAAGAAGAGGTTCAAAAATGGCAGCAAGAAGGGGCCAACATTGTGTATAGGCATAGGGTAATTAGAGATGGGTATAAGGCTGGTAATCTCAAGTCTGCAATGAACTGTAGCTACGTTAAAGATTATGAATTCGTTGCCATTTTTGATGCTGATTTTCAGCCAACCCCTGATTTCCTTAAAAGAACAGTCCCTCATTTCCAGGATCATGAAGAACTGGGACTGGTTCAAGCAAGGTGGTCTTTTGTGAACAAGGATGAGAACTTGCTTACAAGGCTGCAGAATATCAATTTAGCATTCCACTTTGAGGTGGAGCAGCAAGTTAATGGCGTTTTCCTTAATTTCTTCGGGTTCAATGGGACAGCGGGAGTATGGAGGATTAAGGCTCTGGAAGATTCTGGTGGGTGGTTGGAGAGAACCACCGTCGAGGACATGGATATTGCTGTCCGAGCTCATCTTCACGGATGGAAATTCATCTTCCTCAACGATGTAGAGTGCCAGTGTGAATTGCCGGAATCTTATGAAGCTTATCGGAAACAGCAGCATCGATGGCATTCCGGGCCAATGCAATTGTTTCGCCTTTGTTTGCCTGCTATAGTTCGATCCAAGATTAGCGTGTGGAAGAAATTCAATATGATCTTTCTATTCTTTCTTCTAAGGAAGCTAATTCTACCATTCTATTCTTTCACTCTCTTCTGCATAATTCTTCCTATGACCATGTTTGTTCCCGAGGCTGAGCTACCTGCTTGGGTTGTCTGCTACATTCCTGCAACAATGTCATTTCTTAACATTCTCCCTGCACCAAAGTCCTTCCCCTTTATCGTCCCTTATCTTCTTTTTGAGAACACCATGTCTGTAACTAAGTTCAATGCGATGATCTCTGGTTTGTTTCAGCTGGGCAGTGCTTATGAATGGGTAGTTACTAAGAAATCCGGCAGATCATCCGAGGGTGATCTCGTTTCCTTGATTGAAAAAGAATCGACTCATCAAAGAGGGTCATCAGCTCCTAATCTGGAGGAATTGAAGGAAGAGATTCAAAAGCAGGAGCAGCAAGCTTTGCCGAAGAAGAAGAAGAAGAAGAAGCACAATAGAATATACAGGAAAGAGCTGGCTTTAGCTTTTCTTCTTCTAACAGCATCAGCCCGAAGCCTCCTCTCGGCCCAGGGCATCCATTTTTACTTCTTGTTGTTTCAGGGGATCTCTTTTCTTTTGGTGGGTTTGGATCTGATCGGAGAGCAGGTGGAGTGA 2124 44.82 MAPSFDWWTKESHRGTPVVVKMENPNWSMVELEGPSEDYFLIAESPVGVREKGRGKNAKQLTWVLLLKAHKAAGCLTSIGSAFVGLTAAVRRRVASGRTDADADNDIDCSREKENPTLKTRFYSCIKVFLLLSVLLLGFEVAAYFKGWHFSTPHLQLSYLWATPFGVKGTFDWIYSQWVLFRVDYLAPPLQFLANACIILFLIQSLDRLILCMGCFWIRFKKIKPAPKEAPTDDIESGEKGYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKLLIQVLDDSDDPITQVLIKEEVQKWQQEGANIVYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFQDHEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIVRSKISVWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIEKESTHQRGSSAPNLEELKEEIQKQEQQALPKKKKKKKHNRIYRKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVE 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 951974 954450 + Bpe014860.1 Bpe04g00141 101950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00141 707 Coils Coil 630 650 - -
Bpe04g00141 707 Pfam Glycosyl transferase family group 2 338 532 IPR001173 -
Bpe04g00141 707 PANTHER - 6 706 - -
Bpe04g00141 707 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 6 706 - -
Bpe04g00141 707 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 236 461 IPR029044 -
Bpe04g00141 707 SUPERFAMILY Nucleotide-diphospho-sugar transferases 246 523 IPR029044 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00225 Bpe04g00141 CCT
Bpe02g00225 Bpe04g00141 ECH
Bpe02g00467 Bpe04g00141 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00225 Bpe-Chr2:1554122 Bpe04g00141 Bpe-Chr4:951974 0 dispersed
Bpe04g00141 Bpe-Chr4:951974 Bpe04g00343 Bpe-Chr4:2185438 0 dispersed
Bpe11g00844 Bpe-Chr11:6262184 Bpe04g00141 Bpe-Chr4:951974 4.36E-132 dispersed
Bpe02g00467 Bpe-Chr2:3031902 Bpe04g00141 Bpe-Chr4:951974 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00141 - - zju:107420618 1231.47