Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe04g00165 | TTCCGCATGTCTGAAATCTGTGTTCGTCTCATTCGCGGTGCAAAGAAGAGAGAGGCTGCGGCGGGAATGGCGGAAGAACCATTGATTAAGAAGGAACGGGTCGTCTTAGGAGAGCTTCCTATTTTGCAGAATGCTAGTTTGCTTGTAGGTTTAAGGTCTGTCGAAAACTCAGATGAGCAGAAATGTATGGTGAGGAGGAAGGCGAACACGAAATGTCCGAGGATAGCTACAGAAAACAAAGCTAAAATAGCGAAGGATAGCAGTTTGAAATTGGGAATTGATTCGGATTCGGACGACCTTCAAATGTGCCGTTCTTATGCTACAGATATTTATGATTATCTTCACAAAATGGAGATGGAACCGAAAAGAAGGCCACTTCACAATTATCTTGAGAAAATTCAGAAGGATGTGACTGCTAATATGCGAGGGGTGTTGGTCGATTGGTTGGTAGAGGTCGCCGAGGAGTACAAACTCTGTTCAGATACTCTTTACCTCTCCATCTCCTATATCGATAGGTTTTTGTCTTTGCACACTCTTAATCGACAAAGGCTTCAACTTCTTGGCGTTTCTGCTGTGCTCATTGCTTCTAAGTACGAAGAGATTAGCCCTCCACATGTAGAAGAGTTGTGCTATATCACGGACAATACTTATACAAAGGACGAACCTCAATTGTTGGAACAATATTCTGGGTATAAATCGAATGAGTTGAAAGACTGTGTTCTTATGCTGCTTGACCTGTATCTGAGCAGAAGAGGGTCTCTCTTAGCCATAAGAGAGAAATACAAGCAGCACAAGTTCAAATGTGTGTCGTCTCTGCCTTGGCCTCCGGAGATACCCTCTTTATATTTTGAGGATGTACGAGGGTTGTTGCCGATCTGA | 879 | 43.34 | FRMSEICVRLIRGAKKREAAAGMAEEPLIKKERVVLGELPILQNASLLVGLRSVENSDEQKCMVRRKANTKCPRIATENKAKIAKDSSLKLGIDSDSDDLQMCRSYATDIYDYLHKMEMEPKRRPLHNYLEKIQKDVTANMRGVLVDWLVEVAEEYKLCSDTLYLSISYIDRFLSLHTLNRQRLQLLGVSAVLIASKYEEISPPHVEELCYITDNTYTKDEPQLLEQYSGYKSNELKDCVLMLLDLYLSRRGSLLAIREKYKQHKFKCVSSLPWPPEIPSLYFEDVRGLLPI | 292 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 1081293 | 1083317 | + | Bpe014885.1 | Bpe04g00165 | 101974 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe04g00165 | 292 | Gene3D | - | 224 | 271 | - | - | |
| Bpe04g00165 | 292 | Gene3D | - | 109 | 122 | - | - | |
| Bpe04g00165 | 292 | PANTHER | CYCLINS | 24 | 221 | IPR039361 | - | |
| Bpe04g00165 | 292 | PANTHER | CYCLINS | 225 | 286 | IPR039361 | - | |
| Bpe04g00165 | 292 | CDD | CYCLIN | 141 | 220 | IPR013763 | - | |
| Bpe04g00165 | 292 | SMART | cyclin_7 | 147 | 245 | IPR013763 | - | |
| Bpe04g00165 | 292 | Pfam | Cyclin, N-terminal domain | 109 | 226 | IPR006671 | - | |
| Bpe04g00165 | 292 | ProSitePatterns | Cyclins signature. | 142 | 173 | IPR006671 | - | |
| Bpe04g00165 | 292 | PANTHER | CYCLIN-A3-1-RELATED | 24 | 221 | - | - | |
| Bpe04g00165 | 292 | PANTHER | CYCLIN-A3-1-RELATED | 225 | 286 | - | - | |
| Bpe04g00165 | 292 | Gene3D | - | 123 | 221 | - | - | |
| Bpe04g00165 | 292 | SUPERFAMILY | Cyclin-like | 221 | 276 | IPR036915 | - | |
| Bpe04g00165 | 292 | SUPERFAMILY | Cyclin-like | 98 | 221 | IPR036915 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bpe04g00165 | Bpe05g00036 | CCT | |
| Bpe04g00165 | Bpe05g00036 | ECH | |
| Bpe02g00444 | Bpe04g00165 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe04g00165 | Bpe-Chr4:1081293 | Bpe05g00036 | Bpe-Chr5:702446 | 8.24E-18 | dispersed | |
| Bpe02g01650 | Bpe-Chr2:19236533 | Bpe04g00165 | Bpe-Chr4:1081293 | 7.12E-07 | wgd | |
| Bpe02g00444 | Bpe-Chr2:2906099 | Bpe04g00165 | Bpe-Chr4:1081293 | 1.59E-31 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe04g00165 | K06627 | - | zju:107433703 | 258.84 |