Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00173 ATGGCTGTGGAGCTCATGTTGGGTTTTGGTTGCGACGGTTTCTCTGCAAAAATGGACGAGTGTTCGGCTGTCTCCGCCGTACAAGAGGCGGCCTCTGCCGGTATTCGGGGGGTTGAGAGTTTTCTTAGATTGATGTCTGATGGCTCCAATACGCAGTTTCAAGAGCCTTCTTCGAGTTCGAGCGCTGACGCTGTTGCAGACATGGTGGTCGATAAGTTCAAGAAGGTTATTTCGTTACTGGATCGGAACAGAACTGGCCACGCTCGCTTCCGAAGGGCTCCATCGGGGCCTCCGCCTCAGCAGCGGCAGCCGGCGGAACAAGCTTCTGCTTTTAGAGCCTATTCTCGCACACCGATGGCGCGTTTACCTCCTCTGCCTCACGTTCCGCCCACTTTCCAATCTTGGGTAAACTCTTCTCCCATGGCGGCAAAGAACGGGTCCGCCGAGGGAAAGGAAACGGCTGTGACCACCATTACCTTTTCTCCTTCGCCGCCCGTTTCTGCGGCAAATTCGTTTATTTCGTCGCTAACGGGGGATTCTGAGAGTTTGCAACCGTCTTTATCCTCTGGGTTCCAGTTTACCTCGTCTACAGGAAAGCCTCCTCTCTCTTCGTCTTTGATGAAGAGGAAGTGCACCTCTATGGATGATGCAGCTCTTAAATGTGGCTCGCCTTCTTCGCGATGCCATTGTTCGAAGAAAAGCAGAAAAACACGAATAAAGAGAGTGGTTAGAGTTCCTGCCGTCAGCCTGAAAATGGCAGATATTCCAGCCGACGATTATTCCTGGAGGAAGTACGGGCAAAAACCCATCAAAGGCTCTCCTCATCCAAGAGGGTACTACAAGTGTAGTAGTCTGAGAGGATGCCCAGCGAGGAAACACGTGGAGCGCGCCGTAGACGATCCAGCGATGTTGATCATAACATACGAGAACGATCATAATCATGTCCACTCGATCACGGAAACAACGGCAGCGAACGCCCTTGAATCATCATAA 993 51.86 MAVELMLGFGCDGFSAKMDECSAVSAVQEAASAGIRGVESFLRLMSDGSNTQFQEPSSSSSADAVADMVVDKFKKVISLLDRNRTGHARFRRAPSGPPPQQRQPAEQASAFRAYSRTPMARLPPLPHVPPTFQSWVNSSPMAAKNGSAEGKETAVTTITFSPSPPVSAANSFISSLTGDSESLQPSLSSGFQFTSSTGKPPLSSSLMKRKCTSMDDAALKCGSPSSRCHCSKKSRKTRIKRVVRVPAVSLKMADIPADDYSWRKYGQKPIKGSPHPRGYYKCSSLRGCPARKHVERAVDDPAMLIITYENDHNHVHSITETTAANALESS 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1125445 1126620 + Bpe014893.1 Bpe04g00173 101982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00173 330 ProSiteProfiles WRKY domain profile. 251 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe04g00173 330 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 102 IPR044810 GO:0003700
Bpe04g00173 330 SUPERFAMILY WRKY DNA-binding domain 253 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe04g00173 330 Gene3D WRKY domain 244 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe04g00173 330 Pfam WRKY DNA -binding domain 258 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe04g00173 330 MobiDBLite consensus disorder prediction 85 110 - -
Bpe04g00173 330 Pfam Plant zinc cluster domain 208 254 IPR018872 -
Bpe04g00173 330 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 109 330 IPR044810 GO:0003700
Bpe04g00173 330 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 109 330 - -
Bpe04g00173 330 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 22 102 - -
Bpe04g00173 330 MobiDBLite consensus disorder prediction 184 205 - -
Bpe04g00173 330 SMART WRKY_cls 256 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00439 Bpe04g00173 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00606 Bpe-Chr2:3946555 Bpe04g00173 Bpe-Chr4:1125445 1.52E-75 dispersed
Bpe04g00024 Bpe-Chr4:230847 Bpe04g00173 Bpe-Chr4:1125445 4.08E-65 dispersed
Bpe04g00173 Bpe-Chr4:1125445 Bpe14g00545 Bpe-Chr14:4729242 1.41E-65 dispersed
Bpe02g00439 Bpe-Chr2:2866867 Bpe04g00173 Bpe-Chr4:1125445 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21187 PF03106 WRKY 4.00E-25 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00173 - - mcha:111013012 425.246