Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00175 ATGGAAGGAGAGTTCTGTTATGGAGCTTCTTCTTCATCTTCTTCGACCTCTAGCACAGACCAGAAGATAAGGCAGAGGCAACTCCGGCGAGAAGAAAAGCCCTACAGAGGTATACGGATGAGGAAATGGGGAAAGTGGGTGGCCGAGATTAGAGAGCCCAATAAAAGGTCGAGGATTTGGTTGGGTTCTTACTCCACCCCCGTCGCCGCCGCTCGTGCGTACGACACCGCCGTCTTTTATCTCCGGGGACCATCCGCTCGCTTGAATTTTCCCGAGCTCATGATTGGAGAAGAGCAGCGGGGAGATTTGTCTGCCGCTTCTATACGCAAAATCGCCACTGAAGTTGGGGCTGAAGTTGACGCCGTCCAAACAGCTCTTCATTCGTCGATGTCTGTTTCCACTCAGCCGCCGGAAAAGCCGGACTTGAACCAGTTTCCATGCCCCGAAAGTTCAGACGAAGACTGA 465 52.9 MEGEFCYGASSSSSSTSSTDQKIRQRQLRREEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELMIGEEQRGDLSAASIRKIATEVGAEVDAVQTALHSSMSVSTQPPEKPDLNQFPCPESSDED 154
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1131799 1132263 + Bpe014895.1 Bpe04g00175 101984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00175 154 Pfam AP2 domain 35 83 IPR001471 GO:0003700|GO:0006355
Bpe04g00175 154 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Bpe04g00175 154 PRINTS Ethylene responsive element binding protein signature 73 93 IPR001471 GO:0003700|GO:0006355
Bpe04g00175 154 Gene3D AP2/ERF domain 34 92 IPR036955 GO:0003700|GO:0006355
Bpe04g00175 154 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Bpe04g00175 154 MobiDBLite consensus disorder prediction 1 31 - -
Bpe04g00175 154 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677
Bpe04g00175 154 MobiDBLite consensus disorder prediction 7 22 - -
Bpe04g00175 154 MobiDBLite consensus disorder prediction 127 154 - -
Bpe04g00175 154 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 11 152 - -
Bpe04g00175 154 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 11 152 - -
Bpe04g00175 154 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Bpe04g00175 154 CDD AP2 35 93 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00175 Bpe-Chr4:1131799 Bpe05g00031 Bpe-Chr5:611547 6.58E-74 dispersed
Bpe14g00377 Bpe-Chr14:3572317 Bpe04g00175 Bpe-Chr4:1131799 4.81E-27 dispersed
Bpe02g01799 Bpe-Chr2:20246667 Bpe04g00175 Bpe-Chr4:1131799 1.48E-70 wgd
Bpe02g00436 Bpe-Chr2:2846045 Bpe04g00175 Bpe-Chr4:1131799 2.03E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21188 PF00847 AP2 8.20E-12 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00175 K09286 - pvy:116125671 211.846