Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00199 ATGGCTAGTTTCTCTAAACTTAACATGGAATTCATCTTTCATCAGTCAAATCCTGCAGTAGCTATTGCAGTTGCTCTTCTTCTTTCCTTCTGTTTTTCCCGATGGCGGGTTGGTTCTGTTACGCGCAAAACGGTGCCAGAAGTGCCTGGAGGATGGCCCATAGTCGGACATCTTTTCATGCTAGGAGGGTCGAAGCCTCCCCATATAGCTCTAGGATGCTTGGCAGACAAGTACGGCCCCATTTTCAGAATTCGTCTCGGTGGGAAACCCGCAGTGGTGGTGAGTAATTCAGCAATGGCGAAGGAGTGCTTTTCACTCAACGACGCCGCCCTGTTTGCTCGCCCTCAAACGTTGGCTACTGAAAAATTGACCTACAACTTCGCCTTTTTTGCATTTAACAATGACCCTCTTTACTGGCGTGAAGTGCGTAAAATAGCAACGATGGAACTTCTCTCGAACCGCCGAATCGAGCAGCTCAAGCACTTTAGGGTGACCGAGGTAGATACATGGATAACTGAGCTCCGTGACATTTGGGCTGCCGGAAAAGCTCAGAACTCGTTGGTGAAGGTTCCGGTCGACATGAAAGAACTATTTAAGGAGTTGGTGTTCAACGTGGTTCTGAAAATAGTCGTTGGAAAACGCTACTTCGGCTCAAGGAAGGAAGGCGATCAGGAAGAGGCGAGAAGGTTTTCCAGAGCACAGGAGAAGTTATTCCTTTACCTTGGGATGGTCACTGTGTCCGACGCTTTTCCGATTCTTTCCATGTTTGATTTCGGAGGACACAAGAAGGAGATGAAAAACATAGCTGAAGAAATCGATGGCATCCTTGAAAGATGGTTGGAAGAGCACAAGCGAAGGAGGGACGTCAGCTTGTCTGAAAATGACAAAAACGTCATGGACTTAACGATTTCATCCGTTGACGGCAGAAACCTCGGTGCTTACAATGCAGATACAGTAATTAAGGCCACAATCTTGGGGATGATTATAGGAGCCACTGATACGGTCGCAGGAGTTCTGATCTGGGCAACGTCGTTGTTGCTCAACAATCCCCGCTCTTTGAAGAAGGCGCAGGAAGAACTAGACGCCGTGATTGGCAGGGCAAGAATAGTAATTGATTCAGACATAAGCAAGCTAGTTTACCTTGACGCAATTATCAAAGAGTCAACTCGATTATATCCACCTGGACCTCTGGCTACGACTCGTGAGGTCATTGAAGACTGTGTAATCGGCGGCTACCATGTTCGGAAAGGAACCCGACTCGTACCAAACACATGGAAGATCCAGACTGACCCGGAGTTCTGGCCGGAACCAATGGAGTTCAAGCCTGAGAGGTTTCTGACGACCCACAAAAACGTTGATGTCAGAGGCGGTCATCACGAGCTGATTCCATTTGGATGTGGAAGAAGAATGTGCCCTGGGGTAAGCTTTGCGCTTCAAATGTTGCCTCTTACTCTTGCCAGGTTGTTACAGGCGTTTGAGATAGAAACTCCGTTGAACAAACCGGTGGACATGAGTGAAAGCTTTGGATTTAGTAACATGAAAACCACTCCACTAGATGTTCTTATTGCTCCTCGGTTGTCAGCCAATCTGTTTTAA 1596 47.43 MASFSKLNMEFIFHQSNPAVAIAVALLLSFCFSRWRVGSVTRKTVPEVPGGWPIVGHLFMLGGSKPPHIALGCLADKYGPIFRIRLGGKPAVVVSNSAMAKECFSLNDAALFARPQTLATEKLTYNFAFFAFNNDPLYWREVRKIATMELLSNRRIEQLKHFRVTEVDTWITELRDIWAAGKAQNSLVKVPVDMKELFKELVFNVVLKIVVGKRYFGSRKEGDQEEARRFSRAQEKLFLYLGMVTVSDAFPILSMFDFGGHKKEMKNIAEEIDGILERWLEEHKRRRDVSLSENDKNVMDLTISSVDGRNLGAYNADTVIKATILGMIIGATDTVAGVLIWATSLLLNNPRSLKKAQEELDAVIGRARIVIDSDISKLVYLDAIIKESTRLYPPGPLATTREVIEDCVIGGYHVRKGTRLVPNTWKIQTDPEFWPEPMEFKPERFLTTHKNVDVRGGHHELIPFGCGRRMCPGVSFALQMLPLTLARLLQAFEIETPLNKPVDMSESFGFSNMKTTPLDVLIAPRLSANLF 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1327287 1328958 + Bpe014917.1 Bpe04g00199 102008

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00199 531 Pfam Cytochrome P450 46 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 PANTHER CYTOCHROME P450 82C3-RELATED 20 530 - -
Bpe04g00199 531 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 Gene3D Cytochrome P450 39 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 PANTHER CYTOCHROME P450 82A2 20 530 - -
Bpe04g00199 531 SUPERFAMILY Cytochrome P450 42 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe04g00199 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00199 - - - vvi:100855129 563.148
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00413 Bpe-Chr2:2687103 Bpe04g00199 Bpe-Chr4:1327287 0 dispersed
Bpe04g00199 Bpe-Chr4:1327287 Bpe06g00802 Bpe-Chr6:18217470 1.83E-97 dispersed
Bpe08g01030 Bpe-Chr8:12548474 Bpe04g00199 Bpe-Chr4:1327287 1.17E-25 dispersed
Bpe04g00198 Bpe-Chr4:1319410 Bpe04g00199 Bpe-Chr4:1327287 0 tandem
Bpe04g00199 Bpe-Chr4:1327287 Bpe04g00200 Bpe-Chr4:1331001 3.07E-152 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g847 . Blo12g00929 . Bda03g00235 . Bpe04g00199 Bma04g00187 . . . . Cma09g00190 . . . . . . . . . . . . . . . . . . . . . . . Lsi04g01612 Csa03g04159 Chy04g00558 . . . . . . . . . . Cmo01g01939 Cmo09g00185 . . . . . . Bhi09g02032 . . . . . . Cla05g01986 . . . . . . . . . Cme04g00667
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000018 15 22 15 12 7 19 2 17 20 14 15 18 14 11 26 20 19 10 1 20 12 9 8 16 8 19 17 19 17 20 442
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe04g00199 Bpe_Chr04 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0