Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00209 ATGGCGACCAATCGGTTCGTGTGCGAGATCTGCAACAAAGGATTTCAGCGGGACCAGAATCTGCAGCTTCATCGGAGAGGCCACAACTTGCCGTGGAAGCTCCGACAACGGACGAGCAAAGAGGTGCGGAAGAGAGTCTACGTCTGCCCGGAGGCTTCATGCGTTCACCACGACCCGGCCAGAGCTCTAGGAGATCTCACAGGAATAAAGAAGCATTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGCGAACGATGCTCGAAGAAATACGCCGTACAGTCCGATTGGAAGGCGCACATGAAAACTTGTGGAACACGAGAGTATAAATGCGATTGTGGCACTCTATTTTCTAGGAGGGACAGCTTCATCACCCACAGAGCTTTCTGCGATGCTTTAGCGGAGGAAAGTGCACGAGCCCATCAAACCCTAGCAATCTCCAACGCAGAAGGAAAAGGAAATGATTCTTCTGTAAAAATGATTGTGGCTTCACCTCCTCCACCGCCGCTTACGCCGTCCAACACAGTTGTTTCTCCAGCTTTGTCCATTCAAAGTTCGGAGTTGCCAGAGAACCCAATCGGAGTGTCGCCGTCGGCTCTGAACTCGACCGCCATTAATAATCCTATTCCAAGCAACAACTGCAGTAGTGTATTTGCTAGTGTATTTGCATCTACTTCCACAGCTTCAATCTCTCAACAAACAGGGACTTCCCCTCCTCCTTCATTCTCCACTCTAGTCTCCACCTTTACCAGCTCTGATATTAGTCCTAATCTCCCTGCAATGTCCGGCGTTGAACAAACCTCACTTTCTCTTGCCTCCTCTCTCTATCTCCCGGCCAAGAATTTCTCTCTCTATGCTTCTTCCGAACTAGACCACCGCCATTTCACCCCGACTCTTCAGCCGCCTGCCATGTCTGCTACAGCGTTGCTTCAAAAGGCAGCGCAAATGGGAGCTGCCGCATCTAGCGCTTCGTTGCTTCGCAGGTTTGGGTTAGCCATGTCTTCTCCCTCAGCTCAAGAAACCATTTCTAATCACCATTGGACTGGTAGCACAAAGCTCGAGAGCAGCAGAGCCTTTTTAACCGCTGGGTTAGGGCTAGGAATTCCATCTCCAGCTTCTAGTTTAAACGATGCAATGATGGTTTCGTCGTCTCCGTTCGGCAATCAGTTAATGACACGTGATCTTCTAGGGCTCGGCATCGGAGAAACTTCGGCTTCCACCACTGGACTCTCTGCGTTGCTTACTTCATTCGGGAATGGCTTTGAAGTTGCCGCCTCTACAACTTATGGAGGAGGAGGAAGCGTTGGTGGAGCTGAGTCTGGAAGAAACAAGGACAATGGTTGTACATCAGATAGAAAGCCAAGAGGAACCACTTGA 1377 50.25 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEVRKRVYVCPEASCVHHDPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARAHQTLAISNAEGKGNDSSVKMIVASPPPPPLTPSNTVVSPALSIQSSELPENPIGVSPSALNSTAINNPIPSNNCSSVFASVFASTSTASISQQTGTSPPPSFSTLVSTFTSSDISPNLPAMSGVEQTSLSLASSLYLPAKNFSLYASSELDHRHFTPTLQPPAMSATALLQKAAQMGAAASSASLLRRFGLAMSSPSAQETISNHHWTGSTKLESSRAFLTAGLGLGIPSPASSLNDAMMVSSSPFGNQLMTRDLLGLGIGETSASTTGLSALLTSFGNGFEVAASTTYGGGGSVGGAESGRNKDNGCTSDRKPRGTT 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1434848 1436716 - Bpe014927.1 Bpe04g00209 102018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00209 458 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 438 - -
Bpe04g00209 458 Gene3D Classic Zinc Finger 2 29 - -
Bpe04g00209 458 SUPERFAMILY beta-beta-alpha zinc fingers 5 103 IPR036236 -
Bpe04g00209 458 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Bpe04g00209 458 Gene3D Classic Zinc Finger 61 140 - -
Bpe04g00209 458 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 28 IPR013087 -
Bpe04g00209 458 SMART c2h2final6 82 102 IPR013087 -
Bpe04g00209 458 SMART c2h2final6 6 28 IPR013087 -
Bpe04g00209 458 SMART c2h2final6 47 77 IPR013087 -
Bpe04g00209 458 MobiDBLite consensus disorder prediction 431 458 - -
Bpe04g00209 458 Pfam Zinc-finger of C2H2 type 6 28 - -
Bpe04g00209 458 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 1 438 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00451 Bpe-Chr3:23599642 Bpe04g00209 Bpe-Chr4:1434848 2.54E-102 dispersed
Bpe04g00209 Bpe-Chr4:1434848 Bpe06g00051 Bpe-Chr6:611594 7.71E-133 dispersed
Bpe08g01328 Bpe-Chr8:14495662 Bpe04g00209 Bpe-Chr4:1434848 9.63E-93 dispersed
Bpe10g00110 Bpe-Chr10:1913481 Bpe04g00209 Bpe-Chr4:1434848 3.45E-144 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21194 PF12874 zf-met 0.0032 CL0361 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00209 K25869 - zju:107420256 464.151