Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00211 ATGGCTGACCGCTCCGGCTCCCCTTCTCACCCAAAGCTCTCTCTCGCCGCTTCTCATCAGATCCCCAAAGATTTTCTGGGATCTGGCCATCCAATTCCACTTTCACCCCAGTGGCTGCTGCCTAAGGCAGGAGAAACTAAGGGAATGGAGGTTGGGGAAAACAATTGGAACCTGCAAACAGTGAAGGGAAGTCGCCCAGATTTTCTGAAGAAATCAGGGAATATTGAGGTGATGCATGATGTCCCAATGAAAAAGAATGTTTTTAGGCCATCTGTGTTTGATTTTGACGCTGATAGGCGCGACAGATGGCGTGACGAGGAAAGAGACCCATATTCTTCAATTCGCAAAGACCGTTGGAAGGATGGAGAAAAGGATTTGGCTGATAATCGGAGGGCAGATCGATGGATGGAAAATTCTTCCAATAGACATTTTGGCGAAGCTCGCCGTGCTCCATCTGATCGGCGGATAGACTCTAGTAACGTGGATAGTAATTTTGATCACCAGCGGGAAAGCAAATGGAATACTTGCTGGGGACCTGATGACAAAGAGCCTGAAGGCTTCCATGAGAAGTGCGTAGGCTCTGAGAAAGATGGTGACATATTCTATGACAGAGGTTCCTCAAATGTGATAACTCATGAAAAAGATGATAGGGAGGGAAATCATTACCGGCCATGGAGATCAGCTTCCTCTCAAAACAGAGCAAGGGGAGGACCTCATCATCAATCGGCACCAAGCAAACAAGTTTCTACAGTTGCCTATGGTAGAGGGCGTGGAGAAAATCCACCTCCAACTTTTCCAGTCAGCCACGGCAGGAGTGGTTCAACTGGAAGCTCTGTGCACCATTCTAATTCGATCCATTCTCTGCCATTCGGTTCTTCTGTGGAGAAATTAGAAGGTGTTCTCAGTGAGCCTTATCCATTAAGGTATGCAAGGAAGAAGTTACTTGATGTGTACAGAACAGCTGAAGGGAGATCATATCAAGTTATACCTGACGGATTTGTTCCTGTGCCTTCTCTAACATTGGACGAACCATTACAACCTCTAGCGCTTTGTGTACCAAATACTGAGGAAATGATTGTTCTGCAGGAAATTGAAATAGGAGATGTTGTGAGTAGTGGTGCACCTCAAATATCAAGGGATGGACGAAACTCACTAGATATGGGGCAGTCAAGACGAAACAAGCTTGCTGTTACTAGAGAAGATTTCGCCCAGGATCTTGACGAAACTAAAGCGGAAGGTTCTGATGGCACAAAATTTAGTCAGATGAATTTCTCAGATGGCTCTTCATATGAAAGACAAATGCTACATCATGGATCTCAATTGAAAATGGAAACCTCTCAAGATCGCAAGATTAATTCTGGAAATAAGCTCAAAGCAGAAGGTTTCAGAGAAGAAGGTAATTACACGGATGCAAGTGAGCTTCCAAGCAATAGGGAATCAAGTTTTCATAAACATATACCAGTTAATCATGGGGCTACACAGCAAACCTTGTTACTTGGAGAAAACGCACATCCATCTTTGCCTGACTGGAGAGACAATCCAAATGATGTCAACTTTAGGACCCCTGGGAAGGGCTTGTTACAACCATCAAAGAATCTTACTCATGAATTAGGAAATAATTTAGCAAATCATACGTACATCAAAGACAACATGAGAAATCAAATGGGCGAGGACCTTATTATTAGAAGGCAGCTATCTGGAATTTTGGGTGAGGAACAGCACTTAAGGAGACCTATACAGGTTTCTCCAGAGGATCTTAGGCTTTATTATCAAGATCCTTCTGGCGTTATTCAAGGTCCATTTGCTGGGATAGATATCATTGGGTGGTTTGAAGCTGGATATTTTGGCCTGGATTTACTTGTTCGTCTGGAAAGTGCTCCAAGTGACTCACCTTTTTCTTTACTTGGGGACGTTATGCCCCATTTGCAAGCCAAAGCCAAGCCCCCGCCTGGTTTTGGTGGAACCAAGCAAATTGAAAATAGAGATGCTTCTCCTAACATAAGCTTCCATGGCTTTGCACAGAATCACTCTAGTTTGAGTGATGTGGAAATGGTGAGAAATGAGACGAGGCTTAAAAATAGCACAGCAACAGAAGCCGAAAATAGGTTTCTGGAGTCACTGATGTCTTCTAATTTAAGCAGTTCATCCCTTGGGAACTCTTTTTCAGAAGGTATGCAAGTACATTTCGGAAATGCTTCTCATAATCTACCTGCAACTGGAGTAGATGGTGGAAACAACCTGCTCCTGATGGCTAAAAGAATGGCACTAGAAAGACAGAAGTCTTTACCTAATACACATCAGTATTGGCAAGGCAGAGATGCTGCATCGATGGTGTCCAAATCTGATATTATTCAAGATTCCATAACACCACATTCAAAACTCCTAAACCCAATCTTGGAAAATCCTCGCCAAACTCCATATTCCCAAAATGCTGACACAATGTCTATCCTCCAAGGCATGTCTGATGTACCATCATCTGGAATTAATAACGCTGCTGGTTCTTGGGCGAGTTTTACCAGCCAATCTGTGTCTGACGCACTTCAGAGTAAGATTGCCATGCACCACGAGCAAAATTTCCCTTCTTCAGTGTCATTTGGGCTTCAGCAACAGAGGTTTCAACTTCAGAAGCAGCCATCTTTGACTAATCTACTTGCTCAAGCTATTGAAAATCCATCAGCGGTTTCAACGCCAGACAAATTACTTTCATCAAATTTTCAAGAGCAACAGCTGTTGAACATTTTGCAGCAGCAGCAAGTACTTTCCTCCAATTTAACACAAGATCCGAATGTGTTGAATATGTTGCAACAACAATATCTCTTGCAACTACATTCTCAGGCACCTGTTCCCACTCAGCAGATGTCTTTGTTAGATAAATTGGTGTTGCTTAATCAGCAACAGAAACAGGAGGAAGAACAACAGCTATTACGGCAACAACAGTTCCTCTCTCAGGTGCTATCTGAGCATCGATCCCACCTGTTATTTGGAGATCCATCTTATGGTCAGGGACATGCTTCTGCCGTGCCAATAAGAAATGCATTTGCTGATCCCTCTCAGATTCAGCTATCACTGGAGATGCTTCGTAACTGTTCACAACTTCCTGTTGTGGACATGCCATGTGAGCATGTTAACGAAGCTAGGAACATGCCTTTGCAAGTTACCAATGATGTCACTTTTAGTGTTAGTGCGGAAGATTCGTCCCTTTCACTTCCAAATCAAATACTTGGTACAATAACCCAACAGAGGGGTATGAGTGCTGCTCATTCAGGACAGGGGAATGATATGCTGGCAGCACCGAAAATTGTTGAGAACTCAACTTTACCCAATGTGATGAGCAGATCAACAGAGGATACTGGTCTTTTGGAGAAGCCTGTTTCTACTTCTGAAACTAATCTTCCAAAAATCGCAGAGCAAACTACAGAACAAACTAGTGATATTTACAGAACTCTCACGAGTTTGACCTCCGAGACTGGTGTAGATTCTGAACTCCTTGAGTGTGCTGAAGTCTTTGGTTGTTTATCTTCAGAAGGAAAGAGTGAAACTTCTGTTACTGACACTGCCTGTGAGACAAAGATGAAACTGAATAGTGTGTGTGAAAAGCAAGAGGTTGAGAGGGATTTCTGGGAAAATGAACCTTCAAAGCAAGAAGCAGAAAAAGTTGAACTACCTGAACCAAGAAAAGTTTCTGAAAAGAAATCAAAAAAGCAAAAATCTTTGAAGATACAACCCTCTTCTGATGAAGGGAAGGGAATAGGTAAAACCCCACACCTTCCAAAGCACTCTGAAAGTGAAAAGCAGGAGTCTAGTGACTTGAAAGTGGAGTTAGACAAAGGTGCGGGACAAACACTACTTCAACAGAGATCAGGAAATGAAAACAAAAAAATTGTGTCTTTGGAGGTTGTGGATTCTCAACAAATTCAAAGTTCAGTGTCTGAAAAGTTTTCTAGAGACAGCGGCGAAACAGTTGGAATCAAGAGTGACATGCTAAGCAAGCAAGTACAGATTGGACAAAGAGCTTGGAAGCCTGCTCCTGGTTTCAAAGCAAAGTCATTATTAGAAATTCAGGAGGAAGAACAGAAAAAGGCGCAGACTGAAACAGTGATATCTGAAATTGCTACTTCCGTTAGTTCCATGAGTTTGTCGTCTTCTTGGACTGGAATTGTGAGCAATGTAGGAGAGACTCGAAAAGGTTCTGGTCATGAAGCTTTACTAAATTCAAAGAGTAAGAAAAGTCAGTTACATAACCTTTTGGCTGAAGAAGTTCCTTTGAAGTCAAGGAAAGGAGATAATGAGGTTTCTGATTCTCTTTTGAATTCATCTTCCACAACATCCAAGCATTCAGAATCTCTAGATGATGACAACTTTATTGAAGCTAAAGATACTAAAAAGAACCGCAAGAAGGCTGCAAAATCTAAGGGCGTTGGAACGAAGACCACGTCATCAGTTACTTCTGTTGATATTCCTACTGGATCATGTCCAATAGAGAAAGTGAGAAGTTCTCGTCAAGTTCAGCAGGAAAAGGAAGTTATACCCGCAATTCCATCAGGGCCTTCCTTGAGTGATTTTGTTTCTTGGAAGGGAGAGTCAGGAAACTCATCCCCTACTCCAGCATGGTCTACTGAGCCTGGGAAGGTTTCTAAACCCACATCTTTAAGAGAAATACAAAAGGAACAGGAAAGAAGGTTCTCCTCCCAGCATCCATCTCAAATACCAACACCCCAAAAGTCCCAGCCAACTCAAATTTCCCTCAATAATGCTCCTCGGAGGTCTCTTTCTGCATCATCTCCATCTAAGGCTGCATCTCCAATTTCCATCAATCCTCACCCATCTTTTCAGTCAAAAATTAAAGGGGATGAAGAATGGTTTTGGGGACCAATTGATCATTCGAAGCAAGATCAGCAGGTTGATTTTCCGCAACTTACGACTCAAAGTAGTTGGGAAACAAGAGCTACTCCAGGAAAAGGAACTTCGGTTGGATCATTAAACAGACAAAGATCATTGACTGGCAAAGCTTCTGAGAGCTCTCTGTCTATCTCAACGTCTGTTCATTCATCCTCAAGAGGAAAAACAGATGCCAGGACCAAGTATTCAGAAGCCATGGACTTTAGAGATTGGTGCGAGAGTGAATGTGTTCGGCTCATTGGGTCGAAAGATACTAGTTTTCTTGAATTTTGCTTGAAGCAATCCAGAACAGAGGCTGAGTTGCTTTTGACAGAGAACCTTGAATCATATGATCCTGATCACGAGTTCATCGACAAATTCCTCAACTACATGGAGTTGTTATCATCAGAAGTTCTTGAAATTGCGTTTCAGAATCAGAACGATTGGAGGGCAAGTGGATTCAGTGCCAAAGACTTGAAATCCTCAACTACAGGTGATGTTGATGGCTACTCCACATCAAAGGGAGGAAGTAAAAAGAAGGCGAAGAAAGGGAAGAAGGTTAGTGCAGCTATTCTGGGTTTTAATGTTGTCAGTAACAGAATCATGATGGGTGAGATTCAGGCAGTGGAAGATTAG 5514 42.58 MADRSGSPSHPKLSLAASHQIPKDFLGSGHPIPLSPQWLLPKAGETKGMEVGENNWNLQTVKGSRPDFLKKSGNIEVMHDVPMKKNVFRPSVFDFDADRRDRWRDEERDPYSSIRKDRWKDGEKDLADNRRADRWMENSSNRHFGEARRAPSDRRIDSSNVDSNFDHQRESKWNTCWGPDDKEPEGFHEKCVGSEKDGDIFYDRGSSNVITHEKDDREGNHYRPWRSASSQNRARGGPHHQSAPSKQVSTVAYGRGRGENPPPTFPVSHGRSGSTGSSVHHSNSIHSLPFGSSVEKLEGVLSEPYPLRYARKKLLDVYRTAEGRSYQVIPDGFVPVPSLTLDEPLQPLALCVPNTEEMIVLQEIEIGDVVSSGAPQISRDGRNSLDMGQSRRNKLAVTREDFAQDLDETKAEGSDGTKFSQMNFSDGSSYERQMLHHGSQLKMETSQDRKINSGNKLKAEGFREEGNYTDASELPSNRESSFHKHIPVNHGATQQTLLLGENAHPSLPDWRDNPNDVNFRTPGKGLLQPSKNLTHELGNNLANHTYIKDNMRNQMGEDLIIRRQLSGILGEEQHLRRPIQVSPEDLRLYYQDPSGVIQGPFAGIDIIGWFEAGYFGLDLLVRLESAPSDSPFSLLGDVMPHLQAKAKPPPGFGGTKQIENRDASPNISFHGFAQNHSSLSDVEMVRNETRLKNSTATEAENRFLESLMSSNLSSSSLGNSFSEGMQVHFGNASHNLPATGVDGGNNLLLMAKRMALERQKSLPNTHQYWQGRDAASMVSKSDIIQDSITPHSKLLNPILENPRQTPYSQNADTMSILQGMSDVPSSGINNAAGSWASFTSQSVSDALQSKIAMHHEQNFPSSVSFGLQQQRFQLQKQPSLTNLLAQAIENPSAVSTPDKLLSSNFQEQQLLNILQQQQVLSSNLTQDPNVLNMLQQQYLLQLHSQAPVPTQQMSLLDKLVLLNQQQKQEEEQQLLRQQQFLSQVLSEHRSHLLFGDPSYGQGHASAVPIRNAFADPSQIQLSLEMLRNCSQLPVVDMPCEHVNEARNMPLQVTNDVTFSVSAEDSSLSLPNQILGTITQQRGMSAAHSGQGNDMLAAPKIVENSTLPNVMSRSTEDTGLLEKPVSTSETNLPKIAEQTTEQTSDIYRTLTSLTSETGVDSELLECAEVFGCLSSEGKSETSVTDTACETKMKLNSVCEKQEVERDFWENEPSKQEAEKVELPEPRKVSEKKSKKQKSLKIQPSSDEGKGIGKTPHLPKHSESEKQESSDLKVELDKGAGQTLLQQRSGNENKKIVSLEVVDSQQIQSSVSEKFSRDSGETVGIKSDMLSKQVQIGQRAWKPAPGFKAKSLLEIQEEEQKKAQTETVISEIATSVSSMSLSSSWTGIVSNVGETRKGSGHEALLNSKSKKSQLHNLLAEEVPLKSRKGDNEVSDSLLNSSSTTSKHSESLDDDNFIEAKDTKKNRKKAAKSKGVGTKTTSSVTSVDIPTGSCPIEKVRSSRQVQQEKEVIPAIPSGPSLSDFVSWKGESGNSSPTPAWSTEPGKVSKPTSLREIQKEQERRFSSQHPSQIPTPQKSQPTQISLNNAPRRSLSASSPSKAASPISINPHPSFQSKIKGDEEWFWGPIDHSKQDQQVDFPQLTTQSSWETRATPGKGTSVGSLNRQRSLTGKASESSLSISTSVHSSSRGKTDARTKYSEAMDFRDWCESECVRLIGSKDTSFLEFCLKQSRTEAELLLTENLESYDPDHEFIDKFLNYMELLSSEVLEIAFQNQNDWRASGFSAKDLKSSTTGDVDGYSTSKGGSKKKAKKGKKVSAAILGFNVVSNRIMMGEIQAVED 1837
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1443441 1451354 - Bpe014929.1 Bpe04g00211 102020

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00211 1837 PANTHER GYF DOMAIN-CONTAINING PROTEIN 918 1837 - -
Bpe04g00211 1837 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 919 - -
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 141 283 - -
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 1784 1807 - -
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 1204 1241 - -
Bpe04g00211 1837 Gene3D - 573 660 IPR035445 -
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 1389 1610 - -
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 141 223 - -
Bpe04g00211 1837 CDD GYF 585 642 IPR003169 GO:0005515
Bpe04g00211 1837 ProSiteProfiles GYF domain profile. 585 636 IPR003169 GO:0005515
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 1204 1272 - -
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 1563 1610 - -
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 1251 1272 - -
Bpe04g00211 1837 SMART gyf_5 586 641 IPR003169 GO:0005515
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 1445 1463 - -
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 1521 1545 - -
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 224 249 - -
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 503 530 - -
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 1640 1686 - -
Bpe04g00211 1837 PANTHER GYF DOMAIN-CONTAINING PROTEIN 918 1837 - -
Bpe04g00211 1837 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 919 - -
Bpe04g00211 1837 Pfam GYF domain 589 630 IPR003169 GO:0005515
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 267 283 - -
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 1472 1487 - -
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 1640 1689 - -
Bpe04g00211 1837 SUPERFAMILY GYF domain 579 642 IPR035445 -
Bpe04g00211 1837 MobiDBLite consensus disorder prediction 1 29 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00211 - - - qsu:112038346 1545.79
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g00397 Bpe04g00211 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00211 Bpe-Chr4:1443441 Bpe13g00818 Bpe-Chr13:14481327 1.51E-14 dispersed
Bpe02g00397 Bpe-Chr2:2574903 Bpe04g00211 Bpe-Chr4:1443441 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g930 Blo01g01558 . Bda01g00536 Bda03g00257 Bpe02g00397 Bpe04g00211 Bma04g00206 Bma01g02315 Cmo05g00241 Cmo12g00428 . . . Car12g00452 Sed11g1026 . Cpe07g00430 Bhi04g00258 Tan02g1949 Cmetu03g2269 . . . Lcy13g1995 Cla08g01498 Cam08g1988 Cec08g1563 Cco08g1700 Clacu08g1678 . Cre08g1461 Cone4ag1904 Cone7ag1818 . . . . . Cme03g01966 . . . . . . . . . . . Cma12g00478 Cma05g00232 Car05g00194 . Cpe11g00193 . . . . . . . . . . . . . . . Lsi08g01403 Csa02g02043 Chy03g01470 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004078 3 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 3 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe04g00211 Bpe_Chr04 FPKM 8.662295 11.911895 7.887557 8.595973 11.342404 13.505785 12.236219 82.572731 85.430199 82.417503