Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00227 GCCATGGAAGTAGGCGAGAGAGCTAGACAAGCGAAGAAGATGGCGCAGGCTAGCTCCAGAAAAGGCTGCATGAGAGGAAAAGGAGGGCCAGAAAACGCTACCTGCACTTACAAAGGCGTGAGGCAGCGAACTTGGGGCAAATGGGTAGCCGAAATTCGCGAGCCTAACCGAGGAGCTCGTCTGTGGCTCGGCACCTTCGATACTTCTCGCGAAGCAGCTATGGCTTACGATGCTGCCGCAAGAAAGCTCTACGGGCCCGACGCTAAGCTCAATCTTCCTGCAGAATTCAGTATCTCTGCCCAAATTGGAAACCAACCAGTCAAAAACGAATTGCAGCAGATTGAGAACGAGGTGCAGTTCTTCGGAGAGAATAATGAAGAAGATATAAATAGAGGGACGTGGGGGAGCGCGTGCAACTTGAGCTTGGACGAGTCTATGTGGACCGAAGCAGCAATGTCTGTAGAGTTTCCAGTTCTGGAAGAGCATGGATTCTTCTCTACCGCCTGGATAGACGAAGCAAGTGGGTGGGATACGTTTCAGTGGTGCTTGTAG 552 51.81 AMEVGERARQAKKMAQASSRKGCMRGKGGPENATCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAAMAYDAAARKLYGPDAKLNLPAEFSISAQIGNQPVKNELQQIENEVQFFGENNEEDINRGTWGSACNLSLDESMWTEAAMSVEFPVLEEHGFFSTAWIDEASGWDTFQWCL 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1534337 1534888 + Bpe014943.1 Bpe04g00227 102036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00227 183 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Bpe04g00227 183 Gene3D AP2/ERF domain 36 94 IPR036955 GO:0003700|GO:0006355
Bpe04g00227 183 SMART rav1_2 36 99 IPR001471 GO:0003700|GO:0006355
Bpe04g00227 183 SUPERFAMILY DNA-binding domain 36 95 IPR016177 GO:0003677
Bpe04g00227 183 Pfam AP2 domain 36 85 IPR001471 GO:0003700|GO:0006355
Bpe04g00227 183 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D 11 111 - -
Bpe04g00227 183 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Bpe04g00227 183 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Bpe04g00227 183 MobiDBLite consensus disorder prediction 1 28 - -
Bpe04g00227 183 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 11 111 - -
Bpe04g00227 183 CDD AP2 35 94 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00227 Bpe05g00118 CCT
Bpe02g00370 Bpe04g00227 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00227 Bpe-Chr4:1534337 Bpe04g01755 Bpe-Chr4:23209785 1.60E-27 dispersed
Bpe03g01125 Bpe-Chr3:30318381 Bpe04g00227 Bpe-Chr4:1534337 5.87E-30 transposed
Bpe02g00370 Bpe-Chr2:2433806 Bpe04g00227 Bpe-Chr4:1534337 1.40E-86 wgd
Bpe04g00227 Bpe-Chr4:1534337 Bpe05g00118 Bpe-Chr5:2391279 2.85E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21197 PF00847 AP2 4.90E-16 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00227 - - zju:107435462 208.379