Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00246 | ATGGCCGTCGCAGCTTTTTTACCTCTCGCCGATCAACATTTAGAACCCAAAAACCACCATTCCAAAAGAAAATGCAAGCAGCAAAAGCCATCTTCTTCTTCTTCTTCTTGGGATCAAATAAAGAACCTTCTCACCTGCAAACAGATCGAAGGAACCAAAGTTCATGACCCATCAAAGATCCCATCAGCCACGTCCAAAGTCGGGTACACATGTAGCTCCATCTGTAGCTTCAGGGATGTCATTCATGGCAACACTAAGGTCGTACACAGAGCTGATAACTCGCCGGTGAGTAGCTCGGTGGGTCAGGAAGCCAGTTCACTCAGTCGGAAAGGTACAAATGGACAGTCGACTAGGTCTGTCTCGAGATCCATTAATGGTTCAACTCGAGGAATGCAATTGAGAAAGCTTTCTGGCTGTTACGAATACCCTGTTGCGAGAACTACCATATGTTCTTGTTCTAAGTGTGGAGAGGCCTTCCCAAAGATGGAAAGCTTGGAACTTCACCTAGCAGTTCGCCATGCTGTATCGGAGCTGGGGCCGGAAGATTCGGGTCGTAATATAGTGGAGATCATTTTCAAATCAAGCTGGCTCAAAAAAGATAGTACCGTATTCCAAATCGAACGGATATTAAAGGTCCAGAACACCCAGCGAACAATCCAACGTTTCGAAGACTGCCGAGACGCAGTAAAGACACGTGCGCTCAACAGTTGCAGAAAAAACCCTAGGTGCGCTGCCGATGGAAACGAGCTACTGAGGTTCCATTGCACCAGTTTATCGTGCACGCTAGGCGCACATGGATCGTCCAGCTTGTGCGGCTCCGTTCCAGGGTGTGGAGTCTGCACTATCATACGCCACGGCTTCGAAGGAAAAACGGAAGAGGGGGTGCGGACCACAGCTTGCAGCGGTAGGGCGCACGACCTGTGGAGTTGTACAGAAGGAAGGACTCGGAGGGCGATGCTGGTGTGTCGTGTCATCGCCGGAAGGGTGAGGCGCGTCGACGGAGATGCGGCGGAGCAGGAGGAGGCCGTGCCTCCTCTTGGGTCGTATGATTCTGTATGTGGACAAGCTGGCGTGTACTCCAATCTCGAGGAGTTGATCGTTTTCAATCCCAAGGCTATCCTTCCTTGTTTTGTAGTTATTTACGCAGCCCTGGAGTCCTAG | 1161 | 50.56 | MAVAAFLPLADQHLEPKNHHSKRKCKQQKPSSSSSSWDQIKNLLTCKQIEGTKVHDPSKIPSATSKVGYTCSSICSFRDVIHGNTKVVHRADNSPVSSSVGQEASSLSRKGTNGQSTRSVSRSINGSTRGMQLRKLSGCYEYPVARTTICSCSKCGEAFPKMESLELHLAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDSTVFQIERILKVQNTQRTIQRFEDCRDAVKTRALNSCRKNPRCAADGNELLRFHCTSLSCTLGAHGSSSLCGSVPGCGVCTIIRHGFEGKTEEGVRTTACSGRAHDLWSCTEGRTRRAMLVCRVIAGRVRRVDGDAAEQEEAVPPLGSYDSVCGQAGVYSNLEELIVFNPKAILPCFVVIYAALES | 386 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 1648146 | 1649822 | + | Bpe014959.1 | Bpe04g00246 | 102055 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00246 | 386 | MobiDBLite | consensus disorder prediction | 13 | 38 | - | - | |
Bpe04g00246 | 386 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 150 | 178 | IPR013087 | - | |
Bpe04g00246 | 386 | SUPERFAMILY | ADP-ribosylation | 175 | 382 | - | - | |
Bpe04g00246 | 386 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 21 | 385 | - | - | |
Bpe04g00246 | 386 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 150 | 173 | IPR013087 | - | |
Bpe04g00246 | 386 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 21 | 385 | - | - | |
Bpe04g00246 | 386 | MobiDBLite | consensus disorder prediction | 91 | 123 | - | - | |
Bpe04g00246 | 386 | Gene3D | - | 174 | 382 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe04g00246 | Bpe05g00138 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00078 | Bpe-Chr2:591296 | Bpe04g00246 | Bpe-Chr4:1648146 | 1.15E-95 | dispersed | |
Bpe02g01625 | Bpe-Chr2:19116278 | Bpe04g00246 | Bpe-Chr4:1648146 | 1.32E-86 | dispersed | |
Bpe04g00246 | Bpe-Chr4:1648146 | Bpe04g00477 | Bpe-Chr4:3012432 | 1.12E-97 | dispersed | |
Bpe04g00246 | Bpe-Chr4:1648146 | Bpe05g00138 | Bpe-Chr5:3254886 | 3.78E-168 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21202 | None | None | None | None | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00246 | - | - | zju:107408289 | 545.428 |