Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00246 ATGGCCGTCGCAGCTTTTTTACCTCTCGCCGATCAACATTTAGAACCCAAAAACCACCATTCCAAAAGAAAATGCAAGCAGCAAAAGCCATCTTCTTCTTCTTCTTCTTGGGATCAAATAAAGAACCTTCTCACCTGCAAACAGATCGAAGGAACCAAAGTTCATGACCCATCAAAGATCCCATCAGCCACGTCCAAAGTCGGGTACACATGTAGCTCCATCTGTAGCTTCAGGGATGTCATTCATGGCAACACTAAGGTCGTACACAGAGCTGATAACTCGCCGGTGAGTAGCTCGGTGGGTCAGGAAGCCAGTTCACTCAGTCGGAAAGGTACAAATGGACAGTCGACTAGGTCTGTCTCGAGATCCATTAATGGTTCAACTCGAGGAATGCAATTGAGAAAGCTTTCTGGCTGTTACGAATACCCTGTTGCGAGAACTACCATATGTTCTTGTTCTAAGTGTGGAGAGGCCTTCCCAAAGATGGAAAGCTTGGAACTTCACCTAGCAGTTCGCCATGCTGTATCGGAGCTGGGGCCGGAAGATTCGGGTCGTAATATAGTGGAGATCATTTTCAAATCAAGCTGGCTCAAAAAAGATAGTACCGTATTCCAAATCGAACGGATATTAAAGGTCCAGAACACCCAGCGAACAATCCAACGTTTCGAAGACTGCCGAGACGCAGTAAAGACACGTGCGCTCAACAGTTGCAGAAAAAACCCTAGGTGCGCTGCCGATGGAAACGAGCTACTGAGGTTCCATTGCACCAGTTTATCGTGCACGCTAGGCGCACATGGATCGTCCAGCTTGTGCGGCTCCGTTCCAGGGTGTGGAGTCTGCACTATCATACGCCACGGCTTCGAAGGAAAAACGGAAGAGGGGGTGCGGACCACAGCTTGCAGCGGTAGGGCGCACGACCTGTGGAGTTGTACAGAAGGAAGGACTCGGAGGGCGATGCTGGTGTGTCGTGTCATCGCCGGAAGGGTGAGGCGCGTCGACGGAGATGCGGCGGAGCAGGAGGAGGCCGTGCCTCCTCTTGGGTCGTATGATTCTGTATGTGGACAAGCTGGCGTGTACTCCAATCTCGAGGAGTTGATCGTTTTCAATCCCAAGGCTATCCTTCCTTGTTTTGTAGTTATTTACGCAGCCCTGGAGTCCTAG 1161 50.56 MAVAAFLPLADQHLEPKNHHSKRKCKQQKPSSSSSSWDQIKNLLTCKQIEGTKVHDPSKIPSATSKVGYTCSSICSFRDVIHGNTKVVHRADNSPVSSSVGQEASSLSRKGTNGQSTRSVSRSINGSTRGMQLRKLSGCYEYPVARTTICSCSKCGEAFPKMESLELHLAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDSTVFQIERILKVQNTQRTIQRFEDCRDAVKTRALNSCRKNPRCAADGNELLRFHCTSLSCTLGAHGSSSLCGSVPGCGVCTIIRHGFEGKTEEGVRTTACSGRAHDLWSCTEGRTRRAMLVCRVIAGRVRRVDGDAAEQEEAVPPLGSYDSVCGQAGVYSNLEELIVFNPKAILPCFVVIYAALES 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1648146 1649822 + Bpe014959.1 Bpe04g00246 102055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00246 386 MobiDBLite consensus disorder prediction 13 38 - -
Bpe04g00246 386 ProSiteProfiles Zinc finger C2H2 type domain profile. 150 178 IPR013087 -
Bpe04g00246 386 SUPERFAMILY ADP-ribosylation 175 382 - -
Bpe04g00246 386 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 21 385 - -
Bpe04g00246 386 ProSitePatterns Zinc finger C2H2 type domain signature. 150 173 IPR013087 -
Bpe04g00246 386 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 21 385 - -
Bpe04g00246 386 MobiDBLite consensus disorder prediction 91 123 - -
Bpe04g00246 386 Gene3D - 174 382 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00246 Bpe05g00138 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00078 Bpe-Chr2:591296 Bpe04g00246 Bpe-Chr4:1648146 1.15E-95 dispersed
Bpe02g01625 Bpe-Chr2:19116278 Bpe04g00246 Bpe-Chr4:1648146 1.32E-86 dispersed
Bpe04g00246 Bpe-Chr4:1648146 Bpe04g00477 Bpe-Chr4:3012432 1.12E-97 dispersed
Bpe04g00246 Bpe-Chr4:1648146 Bpe05g00138 Bpe-Chr5:3254886 3.78E-168 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21202 None None None None Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00246 - - zju:107408289 545.428