Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00251 ATGAGAAGCTTCTCCGTTTCTGTGCATGGCGTCTCCTTGTTCTTCCTCGTTTCCCTTTTCGTTTCTGCTTCCTTTCCCGACAGTGACTTACAAGCACTGTTGAAGCTAAGAAGCGCCATGATTGGACCTCATGGTTCTGGGTTGGAAGACTGGGTGGACTCGTCCTCAGCGTCGTCTTCCCCTTCCCTCCACTGCTCTTTCTCCGGTGTGTCGTGCGATGCCGATTTCAGAGTAGTCGCTCTTAACGTCTCCAATCTCTCCCTGGTTGGTTCGATTCCTTCTGAGATTGGGCTGTTTGACAAGCTCGTGAACCTGACGATGATTTTCGACAATCTTACCGGTCCGCTTCCCGTCGAAATGGCCAAGCTCGTTTCTCTCAAGAATCTTAACATCTCGAACAATGTGTTTACCGGTAACTTTCCCGGAGAAATGATTCTAAATATGATGGAACTCGAGGCGCTCGACGTTTACAACAACAATTTCACCGGAACACTTCCATTGGAGTTCGTCAAGCTCAAGAAGCTGAACCATCTTAACCTCGGTGGAAACTACTTCACCGGAGAGATTCCGGAAGCTTACTCGGAGATTCAGAGCTTGGAGATACTGAGCTTGGGTGGAAATTCACTCACCGGAAAGATCCCTGCTAGTTTATCTCGCCTGAAGAATCTGAAAAAACTTTATGCCGGATACTACAACGCCTACGATGGGGGAGTACCTCCGGAGTTTGGAGCGTTGAGTGAACTCGAACTTCTTGACTTGGGTAACTGTAATCTCACCGGGGAAATTCCGACGAGCCTAAGCCTCTTAAAACATCTGCACTCGCTGTTTCTGCAAGTCAATCGACTCACCGGCCGTATTCCTTCGGAGTTTTCTGGGTTAGTGAGCTTGAAATCCCTCGACCTTTCAATTAACGAACTGACCGGAGAGATACCAGAAAGTTTTGCGGCGCTCCAGAATATTACACTTATTAATCTGTTCAAGAACAAGCTTCACGGTCCAATTCCTTCATTTATCGGAGACCTTCCAAATCTCGAAGTGCTTCAAATTTGGGAGAATAACTTCACGCTTGAGCTCCCTCGTAATCTTGGACGTAACGGGAAGCTTCTCCATCTCGACGTAGCCACGAATCACCTTACCGGAACCATTCCTCAGGACTTGTGCTTGGGCGGAAAATTGAAGACTTTGATTCTTTTGGAGAATTACTTTTTCGGACCTATTCCTGAAGAACTTGGCCGCTGCAAATCGCTGACAAAAATTAGAATTATGAAGAATTTCTTTAACGGTACGATTCCCGCAGGAATTTTTAACATGCCGGAACTGTTGATGATGGAGTTTAGTGATAACTATTTTTCTGGCGAACTCCCATTGCTAATATCAGGTGATTCTCTTGGACTTATCACATTGTCCAACAATAAAATTACGGGAAAAATTCCTCCGGCCATTGGAAATTTGAAGAACTTGCAGGGATTATCGCTGGAAATGAATGAATTCGAGGGAGAAATTCCAAAAGAATTATTCGATTTGAAAATGCTTTTGAAAATTAACATCAGCTCCAATAATATCAGCGGTGAAATCCCAAGATCGATGTCTCGATGCACTTCTCTAACCTCATTCGATCTAAGCCACAACAAGCTCGTTGGAGAAATTCCTCGAGGTATTGCGAATCTGAAAATTTTGAGCGTATTCAATATTTCTGGCAACCAACTCGCCGGTGAAATACCAAGTGAAATCCGATCGATGTCAAGCCTCACTACTCTGGATCTTTCAGACAATAATTTCTTCGGTAATGTTCCCTCTGGTGGCCAATTTTCCGTCTTCAACGAAAGTTCTTTCACTGGGAATCCCGGCCTCTGTTTGTTCCGTAACAGTAGCTGTCTGTCTCTACCATACCATGCCAAAGACTCTGATCGGAGTCAGAAGACAATCAAATCCTCCAAGATCATCATAGCTATTATTGCTACCATTGCCATCACTACTGTTCTGTTGTTTTTGCTAGTGACTGCTTATGCGATGAAGATGTTACAGAAATCTGAAGCATGGAAGCTCACTGCTTTCCAACGACTGGATTTTAAGGTGGAAGACGTAGTGGAGTGCATGAAGGAAGAGAATATCATTGGAAAAGGTGGTGCTGGAATAGTCTACCGAGGATCCATGCCCGATGGTCGCGATGTTGCGATCAAACGGCTGGTTGGCCGAGGAATGGGAAGGAGCGACCATGGTTTTGCAGCGGAAATCCAGACTCTAGGCCGAATAAGGCACCGGAATATTGTCAGACTTTTAGGATATGTATCGAACAAGGAGAACAATCTGTTGCTTTACGAGTATATGAACAATGGAAGTTTGGAGGAGATATTACATGGAGCAAAAGGCGGCCATTTACAGTGGGATTTGAGGTTGAAGATAGCCACTGATGCTGCTAAAGGTCTCTGTTATCTTCACCATGATTGCACTCCTCTGATCATTCACAGAGACGTGAAATCGAACAACATTTTGCTCGATTCAGACCTAGAAGCTCATGTTGCTGATTTTGGGCTCGCAAAATTCTTGCGAGAGGCTGGCGCCTCTGAATGCATGTCCTCCATTGCTGGCTCTTATGGCTACATAGCTCCAGAGTATGCCTACACGCTGAAGGTGGACGAGAAGAGCGACGTATACAGCTTTGGAGTGGTGCTGCTTGAGCTGGTGACCGGAAGAAGGCCCGTAGGAGAGTTCGGAGATGGAGTGGATATAGTGAGGTGGGTTAGAGAAACCACCATGGAGATGTCTCAGCAGTCTGATGCGGCTGCAGTTCTGGCAGTGGTGGATCCCAGGCTGGGTGGGTACGCACTGACAAGTGTTGTTCATCTGTTTAAGATAGCCATGATGTGCGTCGAGGAAGGAAGTTCGTCAAGGCCTACTATGAGGGAGGTGGTACACATGCTCACTAGCCCCCCGCCGCCACCGCCTCCTCCCCTTACCGTTCAGACCGAACTCGTTAATTTTTAG 2985 46.26 MRSFSVSVHGVSLFFLVSLFVSASFPDSDLQALLKLRSAMIGPHGSGLEDWVDSSSASSSPSLHCSFSGVSCDADFRVVALNVSNLSLVGSIPSEIGLFDKLVNLTMIFDNLTGPLPVEMAKLVSLKNLNISNNVFTGNFPGEMILNMMELEALDVYNNNFTGTLPLEFVKLKKLNHLNLGGNYFTGEIPEAYSEIQSLEILSLGGNSLTGKIPASLSRLKNLKKLYAGYYNAYDGGVPPEFGALSELELLDLGNCNLTGEIPTSLSLLKHLHSLFLQVNRLTGRIPSEFSGLVSLKSLDLSINELTGEIPESFAALQNITLINLFKNKLHGPIPSFIGDLPNLEVLQIWENNFTLELPRNLGRNGKLLHLDVATNHLTGTIPQDLCLGGKLKTLILLENYFFGPIPEELGRCKSLTKIRIMKNFFNGTIPAGIFNMPELLMMEFSDNYFSGELPLLISGDSLGLITLSNNKITGKIPPAIGNLKNLQGLSLEMNEFEGEIPKELFDLKMLLKINISSNNISGEIPRSMSRCTSLTSFDLSHNKLVGEIPRGIANLKILSVFNISGNQLAGEIPSEIRSMSSLTTLDLSDNNFFGNVPSGGQFSVFNESSFTGNPGLCLFRNSSCLSLPYHAKDSDRSQKTIKSSKIIIAIIATIAITTVLLFLLVTAYAMKMLQKSEAWKLTAFQRLDFKVEDVVECMKEENIIGKGGAGIVYRGSMPDGRDVAIKRLVGRGMGRSDHGFAAEIQTLGRIRHRNIVRLLGYVSNKENNLLLYEYMNNGSLEEILHGAKGGHLQWDLRLKIATDAAKGLCYLHHDCTPLIIHRDVKSNNILLDSDLEAHVADFGLAKFLREAGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRRPVGEFGDGVDIVRWVRETTMEMSQQSDAAAVLAVVDPRLGGYALTSVVHLFKIAMMCVEEGSSSRPTMREVVHMLTSPPPPPPPPLTVQTELVNF 994
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 1680385 1683605 - Bpe014964.1 Bpe04g00251 102060
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00251 994 Pfam Protein kinase domain 700 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00251 994 Gene3D Ribonuclease Inhibitor 28 145 IPR032675 -
Bpe04g00251 994 Gene3D Transferase(Phosphotransferase) domain 1 776 978 - -
Bpe04g00251 994 Gene3D Ribonuclease Inhibitor 231 389 IPR032675 -
Bpe04g00251 994 Gene3D Phosphorylase Kinase; domain 1 666 775 - -
Bpe04g00251 994 Pfam Leucine Rich Repeat 248 267 IPR001611 GO:0005515
Bpe04g00251 994 Pfam Leucine Rich Repeat 198 220 IPR001611 GO:0005515
Bpe04g00251 994 ProSiteProfiles Protein kinase domain profile. 699 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00251 994 SMART serkin_6 699 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00251 994 SUPERFAMILY L domain-like 310 629 - -
Bpe04g00251 994 SUPERFAMILY L domain-like 72 383 - -
Bpe04g00251 994 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 11 981 - -
Bpe04g00251 994 Pfam Leucine rich repeat 271 330 IPR001611 GO:0005515
Bpe04g00251 994 Pfam Leucine rich repeat N-terminal domain 26 73 IPR013210 -
Bpe04g00251 994 SUPERFAMILY Protein kinase-like (PK-like) 691 974 IPR011009 -
Bpe04g00251 994 SMART LRR_typ_2 580 603 IPR003591 -
Bpe04g00251 994 SMART LRR_typ_2 269 292 IPR003591 -
Bpe04g00251 994 SMART LRR_typ_2 341 365 IPR003591 -
Bpe04g00251 994 SMART LRR_typ_2 484 508 IPR003591 -
Bpe04g00251 994 SMART LRR_typ_2 293 316 IPR003591 -
Bpe04g00251 994 SMART LRR_typ_2 532 556 IPR003591 -
Bpe04g00251 994 SMART LRR_typ_2 196 220 IPR003591 -
Bpe04g00251 994 Gene3D Ribonuclease Inhibitor 500 625 IPR032675 -
Bpe04g00251 994 Gene3D Ribonuclease Inhibitor 146 230 IPR032675 -
Bpe04g00251 994 Gene3D Ribonuclease Inhibitor 390 499 IPR032675 -
Bpe04g00251 994 PANTHER UNNAMED PRODUCT 11 981 - -
Bpe04g00251 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 820 832 IPR008271 GO:0004672|GO:0006468
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00251 Bpe-Chr4:1680385 Bpe10g00028 Bpe-Chr10:401802 0 dispersed
Bpe04g00251 Bpe-Chr4:1680385 Bpe06g00118 Bpe-Chr6:1906214 0 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63279 PF00069 Pkinase 9.40E-45 CL0016 Bpe PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00251 K00924 - jre:108982112 1345.1