Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00287 ATGGCTGCTGGTATGGATTTTTCGCGTACATTTACATTGGTAGAGGGAAATTACAACAAAGACAATGGTTCAGCCGCACAAGATGAGGATGCCAATGACTTGAATAATATAAAACAAATGAACAATGGGAAACCTCCACGGCATCTCTCTGTAATGCGCCATAGTATTAGCTCAATGAAGCTGATTGGCCCTGCTGATTTGAGTTCAGATACTGCGTTCGACGAGAGTAAGTTACAAGATGAAAAGACAGAATTTGTACCTGTTTTCAGATCAGGAAGTTGTGCTGAAAGAGGACCTAAACAGTATATGGAGGATGAACACATTTGTATCGATGATCTCTTTGAACATATAGGTCCAATCTCTGAGATCATGTCTCCCTGGTCTTTTTATGGGGTGTTTGATGGTCATGGAGGTACAGATGCAGCATCATTTGTGAGAAATAATATCCTCAGATTCACAGTTGAGGATTCTGATTTTCCCGTTAGTATGGAGAAAGCAATTAAAAGTGCTTTTCTAAAAGCTGATTATGTATTTGCTGACACTAGCTCCTTTGATGTTTCCTCTGGTACGACTGCCCTAACTGCCTTTATCTTGGGAAGATCACTGATAATTGCCAATGCTGGTGATTGTCGAGCAGTTTTGGGAAGGCGGGGTCGAGCAATTGAAATGTCAAAAGACCACAAACCCAACTGCCAATCGGAAAGACAGAGAATTGAGAAACTTGGTGGAGTAATTTATGATGGTTATCTCAATGGCCAGCTATCTGTTTCACGGGCCATAGGAGATTGGCACATGAAAGGTGCTAAAGGACAGGCATGCCCATTGAGCGCTGAGCCAGAGTTGCAAGAAATGCTCTTGACGGAGGATGATGAGTTTTTAATAATGGGATGTGATGGGCTGTGGGATGTAATGAGCAGTCAGTGTGCTGTCACTATGGCAAGGAAAGAGCTAATGCTCCACAATGACCCTGAAAGATGTTCAAGAGAGTTGGTGAGAGAGGCTCTCAAGCGCAACACGTGTGATAATTTGACAGTCATTATGATCTGCTTTTCTCCCGACCCTCCCCCTAGAATAGAGATACCTCCATCTCGAGTGAGGCGGAGTATATCGGCGGAGGGTCTGAATCTGTTGAAAGGTGTATTGGACTGTAATTGA 1155 43.29 MAAGMDFSRTFTLVEGNYNKDNGSAAQDEDANDLNNIKQMNNGKPPRHLSVMRHSISSMKLIGPADLSSDTAFDESKLQDEKTEFVPVFRSGSCAERGPKQYMEDEHICIDDLFEHIGPISEIMSPWSFYGVFDGHGGTDAASFVRNNILRFTVEDSDFPVSMEKAIKSAFLKADYVFADTSSFDVSSGTTALTAFILGRSLIIANAGDCRAVLGRRGRAIEMSKDHKPNCQSERQRIEKLGGVIYDGYLNGQLSVSRAIGDWHMKGAKGQACPLSAEPELQEMLLTEDDEFLIMGCDGLWDVMSSQCAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIMICFSPDPPPRIEIPPSRVRRSISAEGLNLLKGVLDCN 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1838362 1840584 - Bpe014990.1 Bpe04g00287 102096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00287 384 CDD PP2Cc 89 350 IPR001932 -
Bpe04g00287 384 Pfam Protein phosphatase 2C 91 342 IPR001932 -
Bpe04g00287 384 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Bpe04g00287 384 Gene3D - 69 353 IPR036457 -
Bpe04g00287 384 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 372 - -
Bpe04g00287 384 PANTHER PROTEIN PHOSPHATASE 2C 1 372 IPR015655 GO:0004722|GO:0006470
Bpe04g00287 384 SUPERFAMILY PP2C-like 84 351 IPR036457 -
Bpe04g00287 384 ProSiteProfiles PPM-type phosphatase domain profile. 90 350 IPR001932 -
Bpe04g00287 384 SMART PP2C_4 80 348 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00303 Bpe04g00287 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00628 Bpe-Chr1:4185663 Bpe04g00287 Bpe-Chr4:1838362 4.94E-106 dispersed
Bpe02g01233 Bpe-Chr2:15945062 Bpe04g00287 Bpe-Chr4:1838362 7.86E-107 dispersed
Bpe04g00287 Bpe-Chr4:1838362 Bpe06g00598 Bpe-Chr6:16834966 7.95E-106 dispersed
Bpe07g01044 Bpe-Chr7:15949670 Bpe04g00287 Bpe-Chr4:1838362 6.16E-33 transposed
Bpe02g00303 Bpe-Chr2:1997928 Bpe04g00287 Bpe-Chr4:1838362 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00287 K14803 - csv:101205355 613.994