Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00343 ATGGCTCCGAGATTAAATTTTTCCGGCTGGTGGGGGAAGGATTCACTGAAAGGAACGCCGGTGGTTGTGACAATGGAGAAACCGAATTTCTCGGTGGTTGAAATCGACGGCCCTGACTCTGCATTTCGGCCGATGGAGAAGAGCCGGGGGAAAAATGCTAAACAATTGACTTGGGTATTGCTTCTCAAAGCTCATCGAGCTGTCGGTTGCATAGCCTGGCTCGCCACTGTCCTCTGGGCATTGCTTGGAACCATTAAGAAGAGATTGATTTACAGACAAGGCGTGGCTGTCGAGAGTGGGAAGGTGGAAAAGGGAAAGTTGCTGTTTAGAGTCATTAGAGGATTCTTAGTAACTTCCCTGATAGTTTTGGCTTTTGAGGTTGTCGGTTATTACAACGGTTGGAACTATTTTTCCAATCCAAATCTGCACATTCCACAGGCTTCTGATTTGCAAGGCTTTCTTCATATGGTCTATTTGATCTGGTTAAACTTTAGAGCAAATTACATTGCCCCTCCAATTCAGGCGCTCTCCAAATTCTGTGTTGTTCTGTTCCTCATCCAATCTTTGGATCGTCTGATACTTAGCTTGGGTTGCTTCTGGATAAAGTACAAGAAAATTAAGCCGAAAATAGAGGATGATCTTCGCAAATCGAACGATGTTGAGGGAGCTGGTTATAACTACCCAATGGTTCTTGTTCAAATACCAATGTGTAACGAGAAAGAGGTTTATGAGCAATCTATCTCTGCAGTCTGTCAGATGGATTGGCCAAAGGATCGTATGCTAATTCAAGTTCTCGATGATTCTGACGATGAAAGCATCCAATGGTTGATCAAGGCAGAGGTTAATCAATGGAGCCAAAAAGGTATCAATATAATCTATAGGCATCGGTTGATAAGAACTGGTTATAAAGCTGGAAATCTCAAGTCTGCAATGAGTTGTGATTATGTCAAAGGCTATGAGTTTGTCGCCATCTTCGATGCCGATTTCCAACCCAATCCCGATTTTCTCAAACAAACAGTACCCCATTTCAAGGACAAACCAGAGCTCGGTTTGGTTCAAGCACGATGGGCGTTTGTAAACAAGGACGAGAACTTGTTGACTCGTCTTCAAAACATAAATCTGTGTTTCCACTTTGAGGTAGAACAGCAGGTTAATGGCGTTTTTCTTAGTTTCTTTGGCTTCAATGGTACTGCTGGTGTTTGGAGAATCAAAGCACTTGAAGAGTCTGGTGGATGGCTTGAAAGGACGACTGTGGAGGATATGGACATAGCTGTCAGGGCCCATCTCAATGGCTGGAAATTCATTTTTCTTAATGATGTCAAGGTCATTTGTGAAGTGCCTGAATCGTATGAAGCTTACCGGAAGCAGCAGCATCGGTGGCATTCCGGTCCGATGCAACTATTTCGATTGTGTCTTCCAACAATCATAACTTCTAAGATATCGGCATGGAAAAAAGCTAATATGATTCTACTGTTCTTTCTGTTGAGGAAGCTAATCCTTCCCTTTTACTCATTCACATTGTTCTGTGTAATTCTTCCATTAACCATGTTCGTCCCAGAGGCTGAGCTTCCTGTTTGGGTAATCTGTTACATACCGGTTTTTATGTCATTCCTTAACATCCTTCCGGCACCCAAATCATTCCCTTTTATAGTCCCTTATCTCCTATTCGAAAACACCATGTCAGTCACCAAATTCAATGCCATGGTTTCTGGATTATTCCAATTGGGCAGCTCTTACGAGTGGGTCGTCACAAAAAAGGCTGGCCGGTCATCGGAATCTGACTTGATTGCAGCAGCAGAGAGGGAGTCGAAGCTAATGATTCAGCCACAAATTTGTAGAGGTGCCTCTGATGGCGAGCTCTCTGAGCTACACTTGTTCAAGGAAAAGAAAGAAGTAGCTTCTGCTCCCATTAAGAAAACAAATAAGATATACAAGAAAGAGCTTGCTTTGGCATTCCTTTTGCTCACGGCTTCAATTAGGAGCCTTTTGTCTGCTCAAGGAGTGCATTTCTACTTCTTGCTCTTTCAAGGAGTGACTTTCCTCCTCGTTGGTCTTGATCTTATTGGGGAACAAATGAGCTGA 2082 43.23 MAPRLNFSGWWGKDSLKGTPVVVTMEKPNFSVVEIDGPDSAFRPMEKSRGKNAKQLTWVLLLKAHRAVGCIAWLATVLWALLGTIKKRLIYRQGVAVESGKVEKGKLLFRVIRGFLVTSLIVLAFEVVGYYNGWNYFSNPNLHIPQASDLQGFLHMVYLIWLNFRANYIAPPIQALSKFCVVLFLIQSLDRLILSLGCFWIKYKKIKPKIEDDLRKSNDVEGAGYNYPMVLVQIPMCNEKEVYEQSISAVCQMDWPKDRMLIQVLDDSDDESIQWLIKAEVNQWSQKGINIIYRHRLIRTGYKAGNLKSAMSCDYVKGYEFVAIFDADFQPNPDFLKQTVPHFKDKPELGLVQARWAFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLSFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVICEVPESYEAYRKQQHRWHSGPMQLFRLCLPTIITSKISAWKKANMILLFFLLRKLILPFYSFTLFCVILPLTMFVPEAELPVWVICYIPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKAGRSSESDLIAAAERESKLMIQPQICRGASDGELSELHLFKEKKEVASAPIKKTNKIYKKELALAFLLLTASIRSLLSAQGVHFYFLLFQGVTFLLVGLDLIGEQMS 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2185438 2188118 + Bpe015037.1 Bpe04g00343 102152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00343 693 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 221 447 IPR029044 -
Bpe04g00343 693 PANTHER - 1 693 - -
Bpe04g00343 693 SUPERFAMILY Nucleotide-diphospho-sugar transferases 227 530 IPR029044 -
Bpe04g00343 693 Pfam Glycosyl transferase family group 2 322 519 IPR001173 -
Bpe04g00343 693 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 1 693 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00467 Bpe-Chr2:3031902 Bpe04g00343 Bpe-Chr4:2185438 0 dispersed
Bpe04g00141 Bpe-Chr4:951974 Bpe04g00343 Bpe-Chr4:2185438 0 dispersed
Bpe04g00343 Bpe-Chr4:2185438 Bpe06g00415 Bpe-Chr6:15540307 0 dispersed
Bpe02g00225 Bpe-Chr2:1554122 Bpe04g00343 Bpe-Chr4:2185438 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00343 - - qsu:111987347 1241.87