Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00346 ATCAACAATGGTAAGTTTTCCACGTCATCAAACGTCGAGAACCAAACTAACTTAGAAATCAAAGCTGGTGCCGATTTCGACTACTCGAAAAGAGCTCAATGGCTACGTGCTGCCGTTTTGGGTGCAAACGACGGGCTAGTCTCCACTGCTTCATTAATGGTGGGGATTGGAGCTGTAAAACAAGACGTTAAAGCTATGATTCTAACTGGATTTGCTGGTCTGGTTGCTGGAGCTTGTAGTATGGCGATAGGAGAGTATGTTTCTGTGTATTCTCAGCTGGAAATAGAGCTTTCTCAGATCAAAAGAGAGAAGGAAAAGAGGGTTGAAAGGTCAAGAGAAGAAGAAGAAGAAGAAGAAGAAGTAGAAGAAGAAGAAGAAGATGATGAAGAAAAAGAGAAACTGCCAAACCCTTTACAAGCAGGAGCAGCTTCAGGTTTATCGTTTTCTTTAGGAGCAGTTGTTCCTCTCTTAGCAGCTTCGTTTATAAAAGAATATAAAGTGAGGCTTTGGGTGGTGGTTAGTGCAGTGACCTTGGGTTTGATGGGGTTTGGATGGTTGGGAGCTGTGCTTGGAAAAGCTCCAGTTGTCCGGTCTTCGACAAGAGTTTTGTTTGGAGGTTGGCTAGCCATGGCTATAACCTTTGGTTTGACCAAGTTAATCGGCTCGAGTTCACTG 675 43.7 INNGKFSTSSNVENQTNLEIKAGADFDYSKRAQWLRAAVLGANDGLVSTASLMVGIGAVKQDVKAMILTGFAGLVAGACSMAIGEYVSVYSQLEIELSQIKREKEKRVERSREEEEEEEEVEEEEEDDEEKEKLPNPLQAGAASGLSFSLGAVVPLLAASFIKEYKVRLWVVVSAVTLGLMGFGWLGAVLGKAPVVRSSTRVLFGGWLAMAITFGLTKLIGSSSL 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2207709 2208383 + Bpe025611 Bpe04g00346 102155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00346 225 Coils Coil 90 134 - -
Bpe04g00346 225 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 15 222 IPR008217 GO:0005384|GO:0030026
Bpe04g00346 225 MobiDBLite consensus disorder prediction 114 131 - -
Bpe04g00346 225 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 15 222 - -
Bpe04g00346 225 MobiDBLite consensus disorder prediction 104 135 - -
Bpe04g00346 225 Pfam VIT family 35 122 IPR008217 GO:0005384|GO:0030026
Bpe04g00346 225 Pfam VIT family 123 217 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01112 Bpe-Chr2:14770754 Bpe04g00346 Bpe-Chr4:2207709 2.67E-89 dispersed
Bpe04g00346 Bpe-Chr4:2207709 Bpe14g00446 Bpe-Chr14:4078724 2.33E-79 dispersed
Bpe02g00219 Bpe-Chr2:1525138 Bpe04g00346 Bpe-Chr4:2207709 1.18E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00346 K22736 - tcc:18592592 289.271