Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00347 | ATGCAGGAAGAAATGGCCAGGAGAAAAGAAGAGGAGAAAAGGAAAAGGAGGGAAGAAGAAGAGAAGTTGAGGAGGGAAGAGGAGGAAAGGCTTAGGCAAGAAGAACTTGAGAGGCAGGCAGAAGAAGCAAAGCGAAGGAAAAAAGAAAAAGAAAAGGAGAAGCTTCTGAAGAAGAAATTGGAAGGCAAGCTTTTGACTGGGAAGCAAAAGGAAGAACAGCGTAGGTTACAGGCAATGAAGAACCAGTTTCTTGCAAATGGTGTGGGTTTGCCTCTTCCCACAGCGGACTCTGGTGCACCAGGTAAACGGCCTATATACAAGACAAAGAAGACCAAAATGACACAACACCAAGCAAGCAGTAGTCCAGCTAAGGTGGTTGAGAACATAGAAGAAATTGAAAATCAACAAGACACTGTGTCAGAGATTGAATACATGGAAGGGAAGAACATTGAAGATGCAGAAACAATTAATGTGGATGAGAAATCTGAAATTTGTGAAACTGTTGAAGAGAATGGAATAGTTGAAGAGGATGTGGATGAGGATGAGGATGAATGGGATGCGAAGAGCTGGGATGATGCTGTTGTTAGTCTATCTATTAAGAGTGCATTTTCCAATGAAGAAGACACTGTATCAGAGCCCATGGTGAAAAAGGAGAAAAAGACTGTACCAGCTTCTCATCATGCAGAAACAATTATAGGCAGCACACCAGGTCTTTCTGTCAGCCAAAGCTTTTCCTCTAAGGATGTTGAATTTAGAAAAAAGCAGCCTGAGGTGGAAATTGTGGATAACAACAAAAGAAAAATTGCTTTTGTTAAGAAGGAAGCACCAAGTTTGGATACTGCTCCTAAAAAGAGTGAAAATAGTCTCCGTTCTCCTATTTGCTGCATTATGGGCCATGTTGATACTGGTAAAACCAAGCTTCTGGATTGTATCCGAGGAACTAATGTTCAAGAAGGTGAGGCTGGAGGTATTACCCAACAGATTGGAGCGACTTATTTTCCTGCAGAAAACATACGTGAAAGAACTAGAGAGTTGAAAGCAGATGCAACCTTGAAAGTTCCGGGTCTACTTGTTATTGATACCCCTGGACATGAATCTTTCACGAACCTGCGTTCTCGGGGTTCTGGTTTATGTGATATTGCAATTTTAGTCGTTGACATTATGCATGGTTTAGAGCCACAAACAATAGAATCACTCAATTTATTAAAAATGAGGAGCACAGAATTCATTGTTGCACTTAATAAGGTGGATCGACTGTACGGGTGGAAAACATGTCGAAATGCACCAATTGTGAAGACAATGAAGCAGCAATCCAAGGACGTGCAGAATGAGTTCAATATGAGGCTCACTCAGATTATTACTCAATTCAAAGAGCAGGGTTTAAATACTGAACTATATTATAAAAATAAAGAAATGGGGGAAACTTTCAGTATAGTACCGACAAGTGCAATAAGTGGTGAAGGCATACCAGATTTGTTATTGTTGCTAGTTCAATGGACTCAGAAAACTATGGTTGAAAAGCTTACTTACAGTGATGAAGTTCAGTGTACAGTGTTGGAGGTCAAGGTGGTTGAAGGTCATGGAACAACCATCGATGTTGTATTAGTTAATGGTGTGCTTCATGAAGGAGACCAAATAGTTGTTTGCGGAATGCAGGCAGGGTCCATTTGTTACTTCCATTCGAGCATTATTGACACCGCACCCAATGAAGGAACTCCGAGTTAA | 1725 | 40.87 | MQEEMARRKEEEKRKRREEEEKLRREEEERLRQEELERQAEEAKRRKKEKEKEKLLKKKLEGKLLTGKQKEEQRRLQAMKNQFLANGVGLPLPTADSGAPGKRPIYKTKKTKMTQHQASSSPAKVVENIEEIENQQDTVSEIEYMEGKNIEDAETINVDEKSEICETVEENGIVEEDVDEDEDEWDAKSWDDAVVSLSIKSAFSNEEDTVSEPMVKKEKKTVPASHHAETIIGSTPGLSVSQSFSSKDVEFRKKQPEVEIVDNNKRKIAFVKKEAPSLDTAPKKSENSLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADATLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRSTEFIVALNKVDRLYGWKTCRNAPIVKTMKQQSKDVQNEFNMRLTQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQAGSICYFHSSIIDTAPNEGTPS | 574 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 2212055 | 2214875 | - | Bpe015040.1 | Bpe04g00347 | 102156 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00347 | 574 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 5B-LIKE | 1 | 556 | - | - | |
Bpe04g00347 | 574 | TIGRFAM | small_GTP: small GTP-binding protein domain | 294 | 419 | IPR005225 | GO:0005525 | |
Bpe04g00347 | 574 | MobiDBLite | consensus disorder prediction | 1 | 74 | - | - | |
Bpe04g00347 | 574 | MobiDBLite | consensus disorder prediction | 169 | 186 | - | - | |
Bpe04g00347 | 574 | Gene3D | Translation factors | 511 | 563 | - | - | |
Bpe04g00347 | 574 | Gene3D | - | 283 | 510 | IPR027417 | - | |
Bpe04g00347 | 574 | MobiDBLite | consensus disorder prediction | 150 | 168 | - | - | |
Bpe04g00347 | 574 | CDD | IF2_eIF5B | 292 | 502 | - | - | |
Bpe04g00347 | 574 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 1 | 556 | IPR015760 | - | |
Bpe04g00347 | 574 | PRINTS | GTP-binding elongation factor signature | 409 | 418 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe04g00347 | 574 | PRINTS | GTP-binding elongation factor signature | 293 | 306 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe04g00347 | 574 | PRINTS | GTP-binding elongation factor signature | 357 | 367 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe04g00347 | 574 | PRINTS | GTP-binding elongation factor signature | 373 | 384 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe04g00347 | 574 | Pfam | Elongation factor Tu GTP binding domain | 293 | 501 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe04g00347 | 574 | Coils | Coil | 1 | 60 | - | - | |
Bpe04g00347 | 574 | MobiDBLite | consensus disorder prediction | 88 | 128 | - | - | |
Bpe04g00347 | 574 | MobiDBLite | consensus disorder prediction | 150 | 186 | - | - | |
Bpe04g00347 | 574 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 289 | 505 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe04g00347 | 574 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 285 | 553 | IPR027417 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00347 | Bpe-Chr4:2212055 | Bpe11g00616 | Bpe-Chr11:4720391 | 3.36E-27 | dispersed | |
Bpe02g00218 | Bpe-Chr2:1513348 | Bpe04g00347 | Bpe-Chr4:2212055 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00347 | K03243 | - | zju:107427478 | 696.427 |