Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00371 ATGGCGGGGTTGACTCAGTTGCAATCTCTCGATCTTTCACACAATATGCTGTCAGGGAAAATAACAGTTCTTAGTTTACTTGCTAGTCTGGCTTCCCTGAATATCTCCTTCAATAATTTTTCAGGTCCTATCCCTCTTACTCCATTTTTCAGAAATTTATCACCAAATTCTTTCCTTCAGAATGCTTATCTCTGTCAGTCAATTGATGGGTCAACCTGTTCTTCGAGTTTATTGCGACAAAATGGACTGAAATCCACAAAAACTGCAGCTTTGTTGTCTGTGATTTTGGCTTCTGTCACCATTTTAGTACTTGGTTCATGCTTCATCCTTACAAGACATCATAAATACATGGTCAAAAAATCTAGAGCTACATCATCTCCTTCAACAAGCGCAGAAGATTTCTCCCATCCATGGTCTTTTATCCCCTTCCAAAAGCTAAATTTTACGGTTGATAACATCCTGGAATGCTTGAAAGATGAAAATGTGATCGGAAAAGGCTGTTCTGGTGTAGTATATAAGGCTGAACTGCCAAATGGAGAGCTAATTGCAGTGAAAAAGCTGTGGAAAACAAAACAAGGCGAAGAACCAATCGATACTTTTGCAGCTGAAATTCAAATTCTTGGCCATATTCGACATCGTAACATAGTCAAACTCCTGGGTTACTGTTCTAATAAAAGCATCAAACTTCTTCTCTACAACTACATTTCAAATGGAAATCTGCAGCAACTTTTACAGGGGAACAGGAATCTAGATTGGGAAACAAGGTACAAAATAGCAGTAGGATCAGCTCAAGGACTTGCATACCTTCACCATGATTGTGTTCCAGCCATTCTTCATAGAGATGTCAAGTGCAATAACATACTTTTAGACTCAAAATTTGAAGCTTATTTAGCAGATTTTGGACTGGCAAAGCTGATGATCACTCCAAATTATCACCAAGCAATGTCCAGAGTAGCTGGGTCTTATGGATATATTGCCCCTGAGTATGGATACACCATGAACATAACAGAAAAGAGCGATGTGTATAGCTATGGAATTGTCTTACTTGAAATTCTAAGTGGCCGGAGTGCAGTAGAGCGACAGATAGGAGACGGGCTCCACATAGTAGAGTGGGTCAAGAAGAAAATGGGAAGTTTTGAACCAGCCATTTCAATACTCGACACAAAGCTTCAAGGTTTACCAGATCAAATGGTTCAGGAGATGCTTCAAACACTTGGAATTGCTATGTTTTGTGTCAACTCCTCTCCCACAGAGAGGCCGACTATGAAGGAAGTGGTAGCTTTGTTAATGGAGGTGAAGAGCTCACCTGAAGAATGGGGAAAAACTTCTCAGCCTCTAATAAAGCAGCCCTCCACTCATCGTTGA 1365 40.29 MAGLTQLQSLDLSHNMLSGKITVLSLLASLASLNISFNNFSGPIPLTPFFRNLSPNSFLQNAYLCQSIDGSTCSSSLLRQNGLKSTKTAALLSVILASVTILVLGSCFILTRHHKYMVKKSRATSSPSTSAEDFSHPWSFIPFQKLNFTVDNILECLKDENVIGKGCSGVVYKAELPNGELIAVKKLWKTKQGEEPIDTFAAEIQILGHIRHRNIVKLLGYCSNKSIKLLLYNYISNGNLQQLLQGNRNLDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKFEAYLADFGLAKLMITPNYHQAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGIVLLEILSGRSAVERQIGDGLHIVEWVKKKMGSFEPAISILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPTERPTMKEVVALLMEVKSSPEEWGKTSQPLIKQPSTHR 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2324340 2325853 + Bpe015060.1 Bpe04g00371 102180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00371 454 SUPERFAMILY L domain-like 3 65 - -
Bpe04g00371 454 SUPERFAMILY Protein kinase-like (PK-like) 140 429 IPR011009 -
Bpe04g00371 454 ProSiteProfiles Leucine-rich repeat profile. 6 28 IPR001611 GO:0005515
Bpe04g00371 454 PANTHER UNNAMED PRODUCT 1 450 - -
Bpe04g00371 454 Gene3D Ribonuclease Inhibitor 1 112 IPR032675 -
Bpe04g00371 454 ProSitePatterns Protein kinases ATP-binding region signature. 163 186 IPR017441 GO:0005524
Bpe04g00371 454 SMART serkin_6 157 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00371 454 PANTHER - 1 450 - -
Bpe04g00371 454 Gene3D Phosphorylase Kinase; domain 1 114 234 - -
Bpe04g00371 454 ProSiteProfiles Protein kinase domain profile. 157 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00371 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Bpe04g00371 454 Pfam Protein kinase domain 159 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00371 454 Gene3D Transferase(Phosphotransferase) domain 1 235 446 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00371 Bpe-Chr4:2324340 Bpe05g01131 Bpe-Chr5:23612290 1.69E-140 dispersed
Bpe04g00371 Bpe-Chr4:2324340 Bpe13g00148 Bpe-Chr13:9178996 8.49E-114 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63284 PF00069 Pkinase 9.50E-46 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00371 - - jre:109011378 767.303