Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00409 ATGGATTTCCGTTCTTTCTTTCTTCTTCTTCTTCTTCTTCCTTATGTGTTTTCTTTTGCTTCTGGATCTCCGGCCATGGCTGCTAACCAGTCTCAGTTTTTTGTTCTCGTGAAAAAGTCTGTGTCCGGGAGCTACTTGTCGAGTTGGGATGTCGCGGGAAGAACAGAAGCTTTCTGCAATTTCACTGGAATCTCCTGTGATGATCGGGGTTATGTGATCGGGATCAATGTCTACGGCTGGTCACTTTCCGGCAGTTTCCCGGCGGACGTCTGCATGTATTTGCCGGAGCTGCGCGTTCTTCGTCTCGGACGAAGTGGCCTCGATGGAACCTTTCCTCGAGGTATCTCCAACTGCTCCCGGTTGGAAGAGCTGGACCTGAGTTATCTCTATCTTACCGGGGAAATTCCAGACCTCTCGCCGATGAAGGCTCTGCGAGTTCTCGACATGTCGTACAACCACTTCGTCGGTGACTTTCCGATCTCGGTTTTTTCCCTGACCAATCTGGAGAGTCTGAATTTCAATGAAGACAACGGTTTTAACTTGTGGCAACTTCCGGAAAATATATCACAGATGAAAAAGCTCAAATCCATGGTTTTGACGACGTGCATGTTACGGGGTCGGATTCCACCGGAGATCGGAAAGCTGACCTCTCTCGTCGACCTAGAGTTGAGTGGGAATTTTCTCGACGGCCAAATTCCGAAGGAAATCTCATTATTGAAAAATCTGAAGCAACTCGAGCTTTACTACAATCAACTTGACGGCGACATTCCTGAGGAGATTGGAAATCTGACAGAGCTCAGAGATTTAGACATGTCGGTCAACCTGCTGACCGGAAAGCTTCCCAAATCGATTTGTCGTCTTCCTCATTTGGAAGCTCTCCAGCTTTATAATAATAGCCTCACCGGAGAAATCCCAGCTGAAATTGCCAATTCAAAGACGTTGACCATGCTATCACTTTATGGCAATTTTCTCACCGGAAACGTACCAGAAAATTTGGGCCGGTTTTCTCCTTTGACTGGTCTTGATTTGTCGGAAAATAAGCTCTCCGGCTCTTTGCCGGTGGAGGTCTGCAGAGGAGGTCGGTTGAAGTATTTTCTAGTTCTTCAAAATAAATTTACAGGACAAATACCTGAAATTTACGCAGACTGCAAGTCTCTTCTTCGTTTTCGTGTTAGTTCTAATGCACTAGTGGGTCCAATACCAGAAGGAATCCTTGATCTTCCCCATGTTTGGATACTCGATTTTAGTTTTAATAATCTGAGTGGGCGAATTCCTTCTTCTGTAAATGCGAGAAATTTGTCGGAGCTGTTCATGCAGAACAACAGGATTTCAGGGGTCATACCGCCTGAACTTTCCCGAGCTACCAGCCTGGTGAAGATTGATTTAAGTAGTAATCTTCTTTCTGGTCCTATTCCTTCGAAAATTGGGAACTTGAAGAAGCTAAATTTGCTGCTTTTGCAAGGAAATAAGCTCAGTTCCTCCATACCTGTTTCTCTCTCTGCACTGAAATCTCTGAACGTTCTCGACGCCTCCGATAATCTCCTCACCGGAAACATCCCGGAGAGTCTCTGCGAGTTGTTGCCTAACTCCATCAACTTCTCCAACAATCAACTTTCCGGCCCAATTCCTCTCTCTCTAATCAAAGGAGGGCTAGCAGAAAGCTTTTCCGGCAATCCAGGACTCTGCGTTTCAGTCTACCTCAACTCCTCCGATCTAAATTTCGCCATTTGCTCAAAAACACACAGCCAGAAAAAGACGAATTCCATCTGGGTACTCGGAATTTCAGGGTTCATCATCCTCATCGGAGCTCTGCTATTTCTGAAACGCCAATTAAGCAGAGAAAAATCAGCATCCGAACAAGAAGAAACGCTTTCTTCATCTTTCTTCTCCTACGACGTAAAAAGCTTCCACCGCATAAGCTTCGACCAGCGGGAAATAATCGAATCCATGGTTCCAAAAAACATCGTCGGCCATGGCGGATCAGGAACAGTGTACAAAATCGAACTAAACAGCGGAGAAGTGGTGGCGGTGAAGAGGCTATACAGCCAAAAGACAAAAGACGAGCTAATACTAGACAAAGAATCAAAAACAGAGGTGGAAACTCTAGGAAGTATAAGGCACAAAAACATAGTGAAATTATACTGCTATTTATCGAGCTTAGATTGCAGGCTTCTGGTTTATGAATACATGAAGAACGGCAATCTCTACGACGCCTTACACAAAGGGTGGGTGCATTTGGATTGGGCGATTCGCCATCAGATCGCGCTTGGCGTGGCGCAGGGGCTTGCCTATCTGCACCACGATCTGGTGCCGCCGATCATTCACCGGGACATAAAGACGACGAATATTCTGTTGGACGGGAATTACCAGCCGAAAGTTGCAGATTTTGGAATAGCCAAGGTTTTACAAGCAAGAGGGAAAGACTCTACCACCACTGTAATTGCCGGGACTTATGGCTATTTAGCACCTGAATATGCATGTTCGTCGAAAGCAACTACGAAATGCGATGTTTACAGCTTCGGAGTGGTGTTAATGGAACTGGTAAGTGGGAAGAAGCCAGTGGAGGAGGAGTTCGGGGAGAATAAGAATATAGTAGGCTGGATTTCAAATAAGGCGGAAACCAAGGAGGGAGCAATGCAGGTTTTGGACAAGAGGTTATTAGGGTTTTGGGGAGAAGAAGAAATGATTCAGGCTCTGAAAATCGCCATTAGAGCGACCTCCAAGAATCCTTCTCTCCGTCCCTCCATGAAAGAAGTAGTTCAGCTGCTGATTGAGGCAGACCCTTCTAGGAACAGGAGCAAGACCAAGGACGACGCCTCCAATGGCTCCAAAATCAAGAACCATGTCGAAATCTGA 2856 45.97 MDFRSFFLLLLLLPYVFSFASGSPAMAANQSQFFVLVKKSVSGSYLSSWDVAGRTEAFCNFTGISCDDRGYVIGINVYGWSLSGSFPADVCMYLPELRVLRLGRSGLDGTFPRGISNCSRLEELDLSYLYLTGEIPDLSPMKALRVLDMSYNHFVGDFPISVFSLTNLESLNFNEDNGFNLWQLPENISQMKKLKSMVLTTCMLRGRIPPEIGKLTSLVDLELSGNFLDGQIPKEISLLKNLKQLELYYNQLDGDIPEEIGNLTELRDLDMSVNLLTGKLPKSICRLPHLEALQLYNNSLTGEIPAEIANSKTLTMLSLYGNFLTGNVPENLGRFSPLTGLDLSENKLSGSLPVEVCRGGRLKYFLVLQNKFTGQIPEIYADCKSLLRFRVSSNALVGPIPEGILDLPHVWILDFSFNNLSGRIPSSVNARNLSELFMQNNRISGVIPPELSRATSLVKIDLSSNLLSGPIPSKIGNLKKLNLLLLQGNKLSSSIPVSLSALKSLNVLDASDNLLTGNIPESLCELLPNSINFSNNQLSGPIPLSLIKGGLAESFSGNPGLCVSVYLNSSDLNFAICSKTHSQKKTNSIWVLGISGFIILIGALLFLKRQLSREKSASEQEETLSSSFFSYDVKSFHRISFDQREIIESMVPKNIVGHGGSGTVYKIELNSGEVVAVKRLYSQKTKDELILDKESKTEVETLGSIRHKNIVKLYCYLSSLDCRLLVYEYMKNGNLYDALHKGWVHLDWAIRHQIALGVAQGLAYLHHDLVPPIIHRDIKTTNILLDGNYQPKVADFGIAKVLQARGKDSTTTVIAGTYGYLAPEYACSSKATTKCDVYSFGVVLMELVSGKKPVEEEFGENKNIVGWISNKAETKEGAMQVLDKRLLGFWGEEEMIQALKIAIRATSKNPSLRPSMKEVVQLLIEADPSRNRSKTKDDASNGSKIKNHVEI 951
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2573605 2576543 - Bpe015093.1 Bpe04g00409 102218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00409 951 Gene3D Ribonuclease Inhibitor 297 571 IPR032675 -
Bpe04g00409 951 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 10 937 - -
Bpe04g00409 951 SMART serkin_6 650 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00409 951 SUPERFAMILY RNI-like 75 373 - -
Bpe04g00409 951 Gene3D Phosphorylase Kinase; domain 1 633 729 - -
Bpe04g00409 951 SMART LRR_typ_2 141 165 IPR003591 -
Bpe04g00409 951 SMART LRR_typ_2 287 311 IPR003591 -
Bpe04g00409 951 SMART LRR_typ_2 335 359 IPR003591 -
Bpe04g00409 951 SMART LRR_typ_2 407 431 IPR003591 -
Bpe04g00409 951 SMART LRR_typ_2 239 263 IPR003591 -
Bpe04g00409 951 SMART LRR_typ_2 215 238 IPR003591 -
Bpe04g00409 951 SMART LRR_typ_2 478 502 IPR003591 -
Bpe04g00409 951 SMART LRR_typ_2 94 118 IPR003591 -
Bpe04g00409 951 Pfam Protein kinase domain 653 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00409 951 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 937 - -
Bpe04g00409 951 Gene3D Transferase(Phosphotransferase) domain 1 730 949 - -
Bpe04g00409 951 ProSitePatterns Protein kinases ATP-binding region signature. 656 678 IPR017441 GO:0005524
Bpe04g00409 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672|GO:0006468
Bpe04g00409 951 MobiDBLite consensus disorder prediction 927 951 - -
Bpe04g00409 951 SUPERFAMILY Protein kinase-like (PK-like) 642 923 IPR011009 -
Bpe04g00409 951 Gene3D Ribonuclease Inhibitor 179 296 IPR032675 -
Bpe04g00409 951 ProSiteProfiles Protein kinase domain profile. 650 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00409 951 Gene3D Ribonuclease Inhibitor 29 178 IPR032675 -
Bpe04g00409 951 MobiDBLite consensus disorder prediction 929 951 - -
Bpe04g00409 951 SUPERFAMILY L domain-like 286 545 - -
Bpe04g00409 951 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00409 Bpe14g00504 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00409 Bpe-Chr4:2573605 Bpe02g01660 Bpe-Chr2:19299744 0 dispersed
Bpe01g00571 Bpe-Chr1:3689543 Bpe04g00409 Bpe-Chr4:2573605 1.06E-45 transposed
Bpe11g00630 Bpe-Chr11:4879207 Bpe04g00409 Bpe-Chr4:2573605 3.14E-07 transposed
Bpe15g00054 Bpe-Chr15:6676096 Bpe04g00409 Bpe-Chr4:2573605 0 transposed
Bpe14g00504 Bpe-Chr14:4473160 Bpe04g00409 Bpe-Chr4:2573605 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63286 PF00069 Pkinase 3.70E-48 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00409 - - csv:101222864 1350.11