Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00415 ATGCCGCATAAAACTACTTACTTCTTTCCCAGGCAATTTCCTGATCACGGACTGGAACCTGCGTCGACTTCTAAACTGAAATTACACCACGAGACGAATATTAAAGAATATACGCGTGGCGTCGAAAGCTACTCGAAGTCGATCCCTCGGCTTCCCCGCGAAATAACGTTCACGAAGACTTCTGCTTTGTCAAATATTTTCACGGGGAGCAGGAAAGTGGCACGATCTGCATCTACTCACGTGAAGACCTGGCTTTTAAACTGCGACGACGGACGGGAGATACTTCTGTCACCGTCGTTGGAGGCGGAGGCGGAGCCGGTGTTGGCTAAAGTTAGGAATGGTGATCACATCTTTGAGCGGCAGGTTTCATTGCCGTTGCTATCAAGCGGGAGTAGTTATGCTGGAAGTTTCTTTTCCGACGCTGGATTGGAGCCGATATCCCGAAATGGTAAGGATTCAAGGGGATCGAATACTTCGTATCTTCTACCTGTTGAGAAACGGGAGGTGGTGCTGGAGGAGGAGAGCAGGGAAAACTTGTCACAGCAGATCAAAGAAAGTTACTATCTACAACTTACTTTGGCAAAAAGGCTAACTTTCCAGGCAAATATTTGTAGTGAGCCCCTGTTTATAGAAGAGAGTAGAGAGGAGGTTACGGATGCTGAAACTGTTTCTTATCGACTTTGGGTGAGTGGTTGCTTGTCTTACTCTGACAAGATATCAGATGGGTTCTACAACATTTTAGGCATGAATCCATATCTCTGGCTGATGTGCAGTGATGTTGAGGAAGGTAGGCGACTGCCTCCTCTTATGTCGCTTAAAGCAGTTGAACCTAGTGAGACTTCAATGGAGGTGGTCCTTGTCGATAGGCAGGGGGACTCGCACCTTAAAGAGCTCGAAGATAAAGCACAACAGTTATATTATTCTTCAGATAACACCCTGGTGTTCATAGAAAATTTGGGAAAACTCGTTGCCGCCTATTTGGGCGGAACTTTTCCAATGGAGCAAGGATATCTTCAGTTGCACTGGAAAGCAGTGAGTAAGAGAATGAGGGAAAATCAGAATTGCATAGTGCTTCCACTGGGCAGTTTATCTATGGGACTATGCAGGCATCGTGCAATCCTTTTTAAGAAACTAGCAGATTATGTTGGTTTGCCATGTCGCATAGCTAGAGGTTGCAAGTACTGTTCAGCAGATCATCAGTCTTCTTGCTTGGTTAAAATTGAAGATGACAGAAAGTTTGTGAGCAGGGAATACGTAGTTGACCTTGTTGGCAAACCAGGACATATACATGGTCCAGATTCTTCAATTAATGGGCGTGCTTCTTCGGTGCCTTCACCTTATCAAACTTCCCATTTAAAAGAACAACTACCTTACGTGGTCTCTCCTTCTTTTCCATTCATGAACTCAGATTCTGCAGCTCAACAAATTTTTCCATATTCAGGGTCCGGAGAAGGCGGTTACCAGACGAAGGAAAGCTGTTCATTTGATGAATCTGGTGATCAATCTTGTATAGGAATGCAATTATCTCGTATATGTTTTGATACGGAAGCCAATGCTGGACATTGTTTGGATCAGTGTTCAGAGTCGCAGTTTCCTGAGGAAGATGTTGCTGAATTACAGGGTGCTGCTAGTGGGGTATTTTTACATGAAAAGTGTTCAAGGCTAGTAGAAAACGAAGTTGCGCAAGCATACGGAAAAGAAAGAGTCGCATTAGGAAAAATATCGACAGACAACAGTACTACCCAACCTAAACCAAGTGTTGTCAGTCTATCCGATCAGAAGCAGATCAAAAGTAATTCTGTAGACCAAGGTAGATTCCCCGCTCCAACTAACCCAAGATATTTAAATCTTGAACCATCTCTTGCGATGGATTGGCTTGAGATCTCGTGGGATGATTTGCATATCAAAGAGCGTGTTGGAGCCGGCTCGTTCGGTACAGTGCATCGTGCTGAATGGCATGGATCGTTAGCAATAATGAAGCGAGTTCGCCATCCAAATGTGGTTCTCTTTATGGGTGCAGTAACAAAGCGTCCTCATCTGTCGATAGTGACTGAATATCTGCCAAGGGGTAGTCTATATCGCCTGATCCATAGACCAGCTTCTAGTGAAATACTGGACCAGAGGAGACGGCTGCGCATGGCGTTGGATGTGGCCAAGGGAATCAATTATCTACACTCTCTTTCTCCTCCTATAGTTCATTGGGATCTTAAATCTCCAAATTTGTTGGTGGACAAAAATTGGACTGTGAAGGTGTGCGATTTTGGCTTGTCCAGATTCAAAGCAAATACTTTCATATCGTCAAAGTCCGTAGCTGGAACACCTGAGTGGATGGCTCCCGAATTTCTTCGGGGTGAGCCCTCGAATGAAAAATCTGATGTATATAGCTTCGGTGTGATTCTTTGGGAACTTGTCACGATGCAACAACCCTGGAATGGACTCGGTCCTGCACAAGTTGTTGGAGCTGTCGCTTTTCAAAACAGAAGGCTTACTATCCCTCATAACACTTGTCCGTTGTTGGCTTCACTTATCGAAACTTGCTGGGCTGATGATCCTGTTCACCGCCCCTCTTTCAGAAGCATAGTGGACTCGCTAAAGAAGCTACTCAAGTCTCCGCAGCAGTTGATAGTGATGGGGGGGACG 2640 45.11 MPHKTTYFFPRQFPDHGLEPASTSKLKLHHETNIKEYTRGVESYSKSIPRLPREITFTKTSALSNIFTGSRKVARSASTHVKTWLLNCDDGREILLSPSLEAEAEPVLAKVRNGDHIFERQVSLPLLSSGSSYAGSFFSDAGLEPISRNGKDSRGSNTSYLLPVEKREVVLEEESRENLSQQIKESYYLQLTLAKRLTFQANICSEPLFIEESREEVTDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWLMCSDVEEGRRLPPLMSLKAVEPSETSMEVVLVDRQGDSHLKELEDKAQQLYYSSDNTLVFIENLGKLVAAYLGGTFPMEQGYLQLHWKAVSKRMRENQNCIVLPLGSLSMGLCRHRAILFKKLADYVGLPCRIARGCKYCSADHQSSCLVKIEDDRKFVSREYVVDLVGKPGHIHGPDSSINGRASSVPSPYQTSHLKEQLPYVVSPSFPFMNSDSAAQQIFPYSGSGEGGYQTKESCSFDESGDQSCIGMQLSRICFDTEANAGHCLDQCSESQFPEEDVAELQGAASGVFLHEKCSRLVENEVAQAYGKERVALGKISTDNSTTQPKPSVVSLSDQKQIKSNSVDQGRFPAPTNPRYLNLEPSLAMDWLEISWDDLHIKERVGAGSFGTVHRAEWHGSLAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPASSEILDQRRRLRMALDVAKGINYLHSLSPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWNGLGPAQVVGAVAFQNRRLTIPHNTCPLLASLIETCWADDPVHRPSFRSIVDSLKKLLKSPQQLIVMGGT 880
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2673349 2680018 + Bpe025623 Bpe04g00415 102224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00415 880 PRINTS Tyrosine kinase catalytic domain signature 725 743 IPR001245 GO:0004672|GO:0006468
Bpe04g00415 880 PRINTS Tyrosine kinase catalytic domain signature 684 697 IPR001245 GO:0004672|GO:0006468
Bpe04g00415 880 PRINTS Tyrosine kinase catalytic domain signature 791 813 IPR001245 GO:0004672|GO:0006468
Bpe04g00415 880 PRINTS Tyrosine kinase catalytic domain signature 835 857 IPR001245 GO:0004672|GO:0006468
Bpe04g00415 880 SUPERFAMILY Protein kinase-like (PK-like) 609 863 IPR011009 -
Bpe04g00415 880 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 142 655 - -
Bpe04g00415 880 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 656 878 - -
Bpe04g00415 880 ProSiteProfiles Protein kinase domain profile. 595 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00415 880 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 142 655 - -
Bpe04g00415 880 Gene3D Phosphorylase Kinase; domain 1 620 657 - -
Bpe04g00415 880 Gene3D Phosphorylase Kinase; domain 1 658 691 - -
Bpe04g00415 880 Pfam Ethylene-responsive protein kinase Le-CTR1 220 429 - -
Bpe04g00415 880 SMART serkin_6 633 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00415 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Bpe04g00415 880 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 656 878 - -
Bpe04g00415 880 Pfam Protein tyrosine and serine/threonine kinase 656 864 IPR001245 GO:0004672|GO:0006468
Bpe04g00415 880 CDD STKc_MAP3K-like 639 864 - -
Bpe04g00415 880 ProSitePatterns Protein kinases ATP-binding region signature. 639 660 IPR017441 GO:0005524
Bpe04g00415 880 Gene3D Transferase(Phosphotransferase) domain 1 692 876 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00143 Bpe04g00415 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00415 Bpe-Chr4:2673349 Bpe04g01547 Bpe-Chr4:21824958 1.73E-67 dispersed
Bpe02g00143 Bpe-Chr2:987745 Bpe04g00415 Bpe-Chr4:2673349 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63287 PF07714 PK_Tyr_Ser-Thr 1.80E-52 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00415 - - csv:101204522 1084.71