Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00419 | ATGCAGGGAGATTATGCAGAGCCCGAGGGCGAACCTAGCGCCATGTTCTCCAAGCTTCATAATCCTCAACCTCAATCTTTCGTCCCCTTTTCTCACTCCTTTCAACTCTCTGCAAGAGAATGTCAGAACCCTGATGAAGAAGGAGAAGAAGAAAGATCACGCCCCGCCACTCTTACACCGTCCAAGAAGCCCGCCGAGCCAAGCTCTGGCGACGGCGCAACCATTGAAGTCCTCAAACGACCCAGGGGTCGTCCTCCTGGCTCAAAGAACAAACCCAAACCGGCTGCTGCTGTTGCTCCCGTCCCAGAGCCTTCGATGAGCTCTTATATTCTCGAAGTTACCGGAGGTAACGATGTCATCGGAGCCATTGCTGGCTTTTGTTGCCGAAAAAACATAGGCCTTACAGTTCTCAGTGGCTCCGGTACTGTTTCTGATGTCACTATTCGGCCCTCTACAGGAGGGCCAATGATGTTTCCTGGTCGGTTTGATATCATCTCCATCAGCGCGACCTTTCTCCCCAATTCGACCACCTTTTCTGTTCCCAGTGGCTTCGTTATCCATCTGGCTGGTAGTCACGGCCATATCTTCGGGGGTTTAGTCTGTGGAGAATTGATCGCCGATGGAACGGTGTTTGTGATAGCCTCTTCGTTCAATAATCCGTCTTATCACCGACTCCCGGACGAAGACTTGACCGGAAACTCGGCCGATGCAAGCGGCGGTGAGAAAAACTCTTCTCCGGGCCCCGATGCCCGAGATAGTGGCAGTCACGCTCCGGCGCAATCATGCGGCATGCTTATGTATGGCAGCCACGTTTCTTCCAATGTAGTTTGGGCTCCCACCGCAAGACCACCATTCGACGGCGATTCTAGCCGATAA | 876 | 53.08 | MQGDYAEPEGEPSAMFSKLHNPQPQSFVPFSHSFQLSARECQNPDEEGEEERSRPATLTPSKKPAEPSSGDGATIEVLKRPRGRPPGSKNKPKPAAAVAPVPEPSMSSYILEVTGGNDVIGAIAGFCCRKNIGLTVLSGSGTVSDVTIRPSTGGPMMFPGRFDIISISATFLPNSTTFSVPSGFVIHLAGSHGHIFGGLVCGELIADGTVFVIASSFNNPSYHRLPDEDLTGNSADASGGEKNSSPGPDARDSGSHAPAQSCGMLMYGSHVSSNVVWAPTARPPFDGDSSR | 291 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 2705796 | 2706671 | + | Bpe015104.1 | Bpe04g00419 | 102228 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00419 | 291 | CDD | DUF296 | 109 | 217 | IPR005175 | - | |
Bpe04g00419 | 291 | MobiDBLite | consensus disorder prediction | 42 | 57 | - | - | |
Bpe04g00419 | 291 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED | 30 | 283 | - | - | |
Bpe04g00419 | 291 | MobiDBLite | consensus disorder prediction | 1 | 100 | - | - | |
Bpe04g00419 | 291 | ProSiteProfiles | PPC domain profile profile. | 103 | 238 | IPR005175 | - | |
Bpe04g00419 | 291 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 105 | 230 | - | - | |
Bpe04g00419 | 291 | MobiDBLite | consensus disorder prediction | 18 | 40 | - | - | |
Bpe04g00419 | 291 | Gene3D | - | 106 | 238 | - | - | |
Bpe04g00419 | 291 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 109 | 219 | IPR005175 | - | |
Bpe04g00419 | 291 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 30 | 283 | IPR014476 | GO:0003680 | |
Bpe04g00419 | 291 | MobiDBLite | consensus disorder prediction | 224 | 261 | - | - | |
Bpe04g00419 | 291 | PIRSF | ESCAROLA | 23 | 281 | IPR014476 | GO:0003680 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00419 | Bpe-Chr4:2705796 | Bpe14g00488 | Bpe-Chr14:4358975 | 1.67E-94 | dispersed | |
Bpe02g00138 | Bpe-Chr2:951701 | Bpe04g00419 | Bpe-Chr4:2705796 | 4.68E-110 | wgd | |
Bpe02g01154 | Bpe-Chr2:15141118 | Bpe04g00419 | Bpe-Chr4:2705796 | 1.60E-96 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00419 | - | - | jre:109013700 | 291.967 |