Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00424 ATGGCTTCTGCGGTTCCAGAAAACCTAACCAGAGAGCAGTACGTGTATCTAGCGAAGCTTGCGGAGCAGGCCGAGAGATATGAAGAAATGGTTCAATTCATGCAAAAGTTAGTCCTCGGATCGACTCCAGCGTCTGAGCTTACTGTCGAGGAGCGTAATCTCTTGTCTGTGGCGTATAAGAACGTCATCGGTTCACTCCGAGCCGCTTGGCGGATCGTCTCCTCTATTGAGCAGAAGGAAGAAGGTCGGAAGAACGAAGAGCATGTGGTGCTTGTTAAAGAGTACAGATCCAAGGTCGAGGCTGAGCTCTCTGATATCTGCGCCAGTATTTTGAAGTTGTTAGATTCTAATCTGATACCTTCAGCCTCAGCTAGTGAATCCAAGGTGTTTTACTTGAAGATGAAAGGAGATTATCATAGGTATATGGCGGAGTTTAAAGTCGGGGATGAGAGGAAAGGCGCTGCTGAAGAAACTATGCTTTCTTACAAGGCTGCACAGTGTTCTGATCATGCTGGAAATTTTTTTCTTGTGAAGGATATTGCAACGGCAGAACTTGCACCTACCCATCCAATAAGGCTTGGACTGGCGCTTAATTTCTCTGTCTTTTACTTTGAGATTTTGAATCAGTCTGATAAAGCATGTAGCATGGCCAAACAGGCATTTGAAGAAGCCATCGCTGAACTGGACACTTTGGGTGAAGAATCATACAAGGACAGTACTCTGATAATGCAACTGTTAAGGGACAACCTCACTCTTTGGACTTCGGATATGCAGGTCAGTTGGACATCCAAATTTCTGTCTTTAATTACTCTCGTTCTCTCTCTTTCTTTCTTATTTTAA 840 44.29 MASAVPENLTREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVVLVKEYRSKVEAELSDICASILKLLDSNLIPSASASESKVFYLKMKGDYHRYMAEFKVGDERKGAAEETMLSYKAAQCSDHAGNFFLVKDIATAELAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQVSWTSKFLSLITLVLSLSFLF 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2741658 2743669 + Bpe015110.1 Bpe04g00424 102233

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00424 279 PANTHER BNAC02G00320D PROTEIN 8 265 - -
Bpe04g00424 279 SMART 1433_4 11 267 IPR023410 -
Bpe04g00424 279 Coils Coil 17 37 - -
Bpe04g00424 279 PRINTS 14-3-3 protein zeta signature 173 199 IPR000308 -
Bpe04g00424 279 PRINTS 14-3-3 protein zeta signature 200 226 IPR000308 -
Bpe04g00424 279 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Bpe04g00424 279 PRINTS 14-3-3 protein zeta signature 227 256 IPR000308 -
Bpe04g00424 279 PANTHER 14-3-3 PROTEIN 8 265 IPR000308 -
Bpe04g00424 279 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Bpe04g00424 279 ProSitePatterns 14-3-3 proteins signature 2. 236 255 IPR023409 -
Bpe04g00424 279 PIRSF 14-3-3 6 264 IPR000308 -
Bpe04g00424 279 Pfam 14-3-3 protein 17 254 IPR023410 -
Bpe04g00424 279 Gene3D - 2 264 IPR036815 -
Bpe04g00424 279 SUPERFAMILY 14-3-3 protein 10 256 IPR036815 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00424 K06630 YWHAE; 14-3-3 protein epsilon - qsu:112005245 441.425
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00424 Bpe-Chr4:2741658 Bpe06g00098 Bpe-Chr6:1450194 3.12E-158 dispersed
Bpe04g00424 Bpe-Chr4:2741658 Bpe02g01128 Bpe-Chr2:14903829 4.61E-135 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g485 . . . Bda03g00463 . Bpe04g00424 Bma04g00438 . . . . . . Car12g00168 . . Cpe07g00156 . . . . . . . . . . . . . . . . . . Lsi04g02270 Csa03g04481 Chy04g00220 . . . . . . . . . . . . Cma12g00185 . . . . . . . . . . . . Cla11g01412 Cam11g1470 Cec11g1500 Cco11g1495 Clacu11g1631 Cmu11g1449 Cre11g1866 . . . Cme04g00247
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe02g01128 BCT,CCT 4 242 14-3-3 family AT4G09000 90.8 2.6e-119 425.2
Bpe04g00439 CCT 5 242 14-3-3 family AT4G09000 86.1 9.5e-114 406.8
Bpe11g01215 . 6 249 14-3-3 family AT4G09000 82.8 4.9e-110 394.4
Bpe14g00462 BCT,CCT 1 284 14-3-3 family AT4G09000 75.4 1.1e-109 393.3
Bpe02g01414 . 6 264 14-3-3 family AT4G09000 79.2 4.1e-109 391.3
Bpe06g00098 . 4 250 14-3-3 family AT4G09000 72.9 4.6e-100 361.3
Bpe04g00424 . 11 263 14-3-3 family AT4G09000 72.3 5.6e-98 354.4
Bpe14g00635 . 4 238 14-3-3 family AT4G09000 68.8 2.8e-89 325.5
Bpe14g00124 . 4 214 14-3-3 family AT4G09000 78.2 6.4e-86 314.3
Bpe10g00051 . 10 207 14-3-3 family AT4G09000 72.2 6.4e-78 287.7
Bpe02g01128 BCT,CCT 6 260 14-3-3 family AT1G78300 91.1 2.6e-125 444.9
Bpe14g00462 BCT,CCT 7 302 14-3-3 family AT1G78300 77.5 4.8e-116 414.1
Bpe04g00439 CCT 5 254 14-3-3 family AT1G78300 85.2 4.8e-116 414.1
Bpe11g01215 . 6 244 14-3-3 family AT1G78300 86.2 8.8e-110 393.3
Bpe02g01414 . 6 259 14-3-3 family AT1G78300 82.3 1.5e-109 392.5
Bpe06g00098 . 11 246 14-3-3 family AT1G78300 75.0 1.8e-99 359.0
Bpe04g00424 . 11 258 14-3-3 family AT1G78300 73.8 2.7e-98 355.1
Bpe14g00635 . 7 244 14-3-3 family AT1G78300 69.6 1.6e-90 329.3
Bpe14g00124 . 6 214 14-3-3 family AT1G78300 79.9 4.0e-86 314.7
Bpe10g00051 . 11 207 14-3-3 family AT1G78300 72.1 4.0e-78 288.1
Bpe02g01414 . 6 262 14-3-3 family AT5G38480 84.8 4.7e-116 414.1
Bpe02g01128 BCT,CCT 5 257 14-3-3 family AT5G38480 85.0 3.1e-115 411.4
Bpe11g01215 . 6 246 14-3-3 family AT5G38480 88.4 7.6e-114 406.8
Bpe14g00462 BCT,CCT 7 299 14-3-3 family AT5G38480 74.7 5.1e-110 394.0
Bpe04g00439 CCT 6 255 14-3-3 family AT5G38480 80.0 4.3e-109 391.0
Bpe06g00098 . 10 247 14-3-3 family AT5G38480 73.1 8.4e-97 350.1
Bpe04g00424 . 10 260 14-3-3 family AT5G38480 72.1 3.2e-96 348.2
Bpe14g00124 . 6 214 14-3-3 family AT5G38480 86.1 4.3e-93 337.8
Bpe14g00635 . 7 244 14-3-3 family AT5G38480 72.5 1.8e-91 332.4
Bpe10g00051 . 10 207 14-3-3 family AT5G38480 70.7 2.2e-76 282.3
Bpe02g01128 BCT,CCT 3 242 14-3-3 family AT1G35160 91.3 4.8e-120 427.6
Bpe04g00439 CCT 4 242 14-3-3 family AT1G35160 86.2 1.1e-113 406.4
Bpe14g00462 BCT,CCT 4 284 14-3-3 family AT1G35160 76.9 4.1e-111 397.9
Bpe11g01215 . 6 243 14-3-3 family AT1G35160 85.3 1.7e-109 392.5
Bpe02g01414 . 6 258 14-3-3 family AT1G35160 80.6 1.5e-108 389.4
Bpe06g00098 . 1 252 14-3-3 family AT1G35160 72.2 4.2e-100 361.3
Bpe04g00424 . 1 258 14-3-3 family AT1G35160 70.9 4.4e-97 351.3
Bpe14g00635 . 2 237 14-3-3 family AT1G35160 70.2 5.2e-90 327.8
Bpe14g00124 . 3 214 14-3-3 family AT1G35160 79.8 3.1e-87 318.5
Bpe10g00051 . 11 207 14-3-3 family AT1G35160 72.1 1.0e-77 287.0
Bpe02g01128 BCT,CCT 6 255 14-3-3 family AT5G16050 80.0 5.9e-109 390.6
Bpe02g01414 . 5 259 14-3-3 family AT5G16050 78.8 2.1e-106 382.1
Bpe11g01215 . 5 244 14-3-3 family AT5G16050 82.5 8.0e-106 380.2
Bpe04g00439 CCT 4 255 14-3-3 family AT5G16050 76.2 9.8e-104 373.2
Bpe14g00462 BCT,CCT 4 297 14-3-3 family AT5G16050 68.4 6.3e-103 370.5
Bpe06g00098 . 10 245 14-3-3 family AT5G16050 69.5 4.3e-91 331.3
Bpe04g00424 . 10 257 14-3-3 family AT5G16050 67.7 2.0e-88 322.4
Bpe14g00124 . 4 214 14-3-3 family AT5G16050 79.1 1.6e-85 312.8
Bpe14g00635 . 1 244 14-3-3 family AT5G16050 65.0 1.3e-84 309.7
Bpe10g00051 . 10 207 14-3-3 family AT5G16050 66.7 3.8e-71 265.0
Bpe06g00098 . 6 246 14-3-3 family AT5G10450 85.9 4.8e-114 407.5
Bpe04g00424 . 9 260 14-3-3 family AT5G10450 82.9 9.9e-112 399.8
Bpe02g01128 BCT,CCT 1 251 14-3-3 family AT5G10450 77.8 4.3e-107 384.4
Bpe11g01215 . 7 244 14-3-3 family AT5G10450 78.7 3.2e-102 368.2
Bpe04g00439 CCT 7 242 14-3-3 family AT5G10450 76.8 1.8e-100 362.5
Bpe02g01414 . 7 259 14-3-3 family AT5G10450 72.4 5.7e-99 357.5
Bpe14g00462 BCT,CCT 4 293 14-3-3 family AT5G10450 65.6 8.2e-98 353.6
Bpe10g00051 . 9 207 14-3-3 family AT5G10450 85.4 1.8e-92 335.9
Bpe14g00635 . 1 238 14-3-3 family AT5G10450 66.4 3.2e-86 315.1
Bpe14g00124 . 4 214 14-3-3 family AT5G10450 70.8 9.4e-78 287.0
Bpe02g01414 . 4 259 14-3-3 family AT3G02520 85.5 1.2e-117 419.5
Bpe02g01128 BCT,CCT 6 259 14-3-3 family AT3G02520 85.1 2.6e-117 418.3
Bpe04g00439 CCT 5 259 14-3-3 family AT3G02520 82.4 2.2e-116 415.2
Bpe11g01215 . 4 244 14-3-3 family AT3G02520 88.0 2.5e-115 411.8
Bpe14g00462 BCT,CCT 7 301 14-3-3 family AT3G02520 74.0 1.9e-112 402.1
Bpe06g00098 . 10 245 14-3-3 family AT3G02520 75.4 2.5e-99 358.6
Bpe14g00124 . 6 214 14-3-3 family AT3G02520 87.6 5.7e-96 347.4
Bpe04g00424 . 10 257 14-3-3 family AT3G02520 72.2 9.7e-96 346.7
Bpe14g00635 . 4 243 14-3-3 family AT3G02520 71.1 6.5e-92 334.0
Bpe10g00051 . 10 207 14-3-3 family AT3G02520 74.2 1.3e-79 293.1
Bpe06g00098 . 6 247 14-3-3 family AT5G65430 85.5 1.1e-115 412.9
Bpe04g00424 . 9 259 14-3-3 family AT5G65430 83.3 1.9e-112 402.1
Bpe02g01128 BCT,CCT 1 242 14-3-3 family AT5G65430 79.8 1.3e-105 379.4
Bpe11g01215 . 7 256 14-3-3 family AT5G65430 75.7 1.4e-102 369.4
Bpe04g00439 CCT 4 242 14-3-3 family AT5G65430 76.7 3.4e-101 364.8
Bpe02g01414 . 7 261 14-3-3 family AT5G65430 73.0 6.4e-100 360.5
Bpe14g00462 BCT,CCT 9 284 14-3-3 family AT5G65430 67.9 3.9e-97 351.3
Bpe10g00051 . 9 207 14-3-3 family AT5G65430 85.9 1.5e-93 339.3
Bpe14g00635 . 1 238 14-3-3 family AT5G65430 68.5 1.6e-87 319.3
Bpe14g00124 . 7 214 14-3-3 family AT5G65430 71.8 3.1e-78 288.5
Bpe14g00635 . 1 244 14-3-3 family AT2G42590 82.0 7.7e-112 400.2
Bpe02g01128 BCT,CCT 8 244 14-3-3 family AT2G42590 70.9 3.7e-90 328.2
Bpe04g00439 CCT 8 255 14-3-3 family AT2G42590 67.6 2.9e-87 318.5
Bpe11g01215 . 8 245 14-3-3 family AT2G42590 70.6 6.6e-87 317.4
Bpe02g01414 . 8 260 14-3-3 family AT2G42590 68.8 2.5e-86 315.5
Bpe06g00098 . 11 245 14-3-3 family AT2G42590 66.4 5.2e-84 307.8
Bpe14g00462 BCT,CCT 9 290 14-3-3 family AT2G42590 60.3 7.5e-83 303.9
Bpe04g00424 . 11 257 14-3-3 family AT2G42590 63.2 6.0e-80 294.3
Bpe14g00124 . 8 214 14-3-3 family AT2G42590 66.7 4.4e-67 251.5
Bpe10g00051 . 11 207 14-3-3 family AT2G42590 64.0 9.2e-65 243.8
Bpe14g00635 . 6 243 14-3-3 family AT1G22300 76.9 1.7e-102 369.0
Bpe04g00439 CCT 8 246 14-3-3 family AT1G22300 70.3 1.7e-89 325.9
Bpe02g01128 BCT,CCT 8 246 14-3-3 family AT1G22300 69.0 3.2e-88 321.6
Bpe02g01414 . 4 259 14-3-3 family AT1G22300 66.7 6.0e-87 317.4
Bpe11g01215 . 4 244 14-3-3 family AT1G22300 68.9 8.6e-86 313.5
Bpe14g00462 BCT,CCT 9 288 14-3-3 family AT1G22300 59.6 2.6e-82 302.0
Bpe06g00098 . 11 245 14-3-3 family AT1G22300 64.7 2.7e-79 292.0
Bpe04g00424 . 11 257 14-3-3 family AT1G22300 62.2 5.6e-77 284.3
Bpe14g00124 . 5 214 14-3-3 family AT1G22300 65.6 4.8e-68 254.6
Bpe10g00051 . 11 207 14-3-3 family AT1G22300 61.9 1.3e-60 229.9
Bpe14g00635 . 11 242 14-3-3 family AT1G34760 81.5 2.1e-103 372.1
Bpe04g00439 CCT 8 245 14-3-3 family AT1G34760 70.2 7.1e-88 320.5
Bpe02g01128 BCT,CCT 12 243 14-3-3 family AT1G34760 71.1 9.2e-88 320.1
Bpe02g01414 . 4 259 14-3-3 family AT1G34760 66.8 1.9e-85 312.4
Bpe11g01215 . 4 244 14-3-3 family AT1G34760 70.1 3.3e-85 311.6
Bpe14g00462 BCT,CCT 13 287 14-3-3 family AT1G34760 61.1 1.4e-80 296.2
Bpe06g00098 . 15 248 14-3-3 family AT1G34760 65.0 9.3e-80 293.5
Bpe04g00424 . 11 258 14-3-3 family AT1G34760 61.3 4.8e-76 281.2
Bpe14g00124 . 5 214 14-3-3 family AT1G34760 66.2 5.3e-67 251.1
Bpe10g00051 . 15 207 14-3-3 family AT1G34760 63.2 9.6e-61 230.3
Bpe14g00635 . 5 244 14-3-3 family AT1G26480 80.4 6.6e-108 387.1
Bpe02g01128 BCT,CCT 8 256 14-3-3 family AT1G26480 71.3 4.3e-91 331.3
Bpe04g00439 CCT 8 259 14-3-3 family AT1G26480 67.9 6.8e-89 323.9
Bpe11g01215 . 5 244 14-3-3 family AT1G26480 71.7 2.9e-87 318.5
Bpe02g01414 . 5 259 14-3-3 family AT1G26480 69.0 8.3e-87 317.0
Bpe14g00462 BCT,CCT 9 292 14-3-3 family AT1G26480 62.1 2.5e-83 305.4
Bpe06g00098 . 11 245 14-3-3 family AT1G26480 66.4 5.6e-83 304.3
Bpe04g00424 . 11 257 14-3-3 family AT1G26480 63.6 1.1e-78 290.0
Bpe14g00124 . 4 214 14-3-3 family AT1G26480 65.9 1.2e-66 250.0
Bpe10g00051 . 11 207 14-3-3 family AT1G26480 63.5 2.2e-63 239.2
Bpe14g00635 . 6 236 14-3-3 family AT1G78220 51.7 9.1e-64 240.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003275 3 1 2 3 3 1 2 2 2 2 1 1 2 1 2 1 1 4 2 1 2 2 1 1 0 1 1 2 1 0 48
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe04g00424 Bpe_Chr04 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0