Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00424 ATGGCTTCTGCGGTTCCAGAAAACCTAACCAGAGAGCAGTACGTGTATCTAGCGAAGCTTGCGGAGCAGGCCGAGAGATATGAAGAAATGGTTCAATTCATGCAAAAGTTAGTCCTCGGATCGACTCCAGCGTCTGAGCTTACTGTCGAGGAGCGTAATCTCTTGTCTGTGGCGTATAAGAACGTCATCGGTTCACTCCGAGCCGCTTGGCGGATCGTCTCCTCTATTGAGCAGAAGGAAGAAGGTCGGAAGAACGAAGAGCATGTGGTGCTTGTTAAAGAGTACAGATCCAAGGTCGAGGCTGAGCTCTCTGATATCTGCGCCAGTATTTTGAAGTTGTTAGATTCTAATCTGATACCTTCAGCCTCAGCTAGTGAATCCAAGGTGTTTTACTTGAAGATGAAAGGAGATTATCATAGGTATATGGCGGAGTTTAAAGTCGGGGATGAGAGGAAAGGCGCTGCTGAAGAAACTATGCTTTCTTACAAGGCTGCACAGTGTTCTGATCATGCTGGAAATTTTTTTCTTGTGAAGGATATTGCAACGGCAGAACTTGCACCTACCCATCCAATAAGGCTTGGACTGGCGCTTAATTTCTCTGTCTTTTACTTTGAGATTTTGAATCAGTCTGATAAAGCATGTAGCATGGCCAAACAGGCATTTGAAGAAGCCATCGCTGAACTGGACACTTTGGGTGAAGAATCATACAAGGACAGTACTCTGATAATGCAACTGTTAAGGGACAACCTCACTCTTTGGACTTCGGATATGCAGGTCAGTTGGACATCCAAATTTCTGTCTTTAATTACTCTCGTTCTCTCTCTTTCTTTCTTATTTTAA 840 44.29 MASAVPENLTREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVVLVKEYRSKVEAELSDICASILKLLDSNLIPSASASESKVFYLKMKGDYHRYMAEFKVGDERKGAAEETMLSYKAAQCSDHAGNFFLVKDIATAELAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQVSWTSKFLSLITLVLSLSFLF 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2741658 2743669 + Bpe015110.1 Bpe04g00424 102233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00424 279 PANTHER BNAC02G00320D PROTEIN 8 265 - -
Bpe04g00424 279 SMART 1433_4 11 267 IPR023410 -
Bpe04g00424 279 Coils Coil 17 37 - -
Bpe04g00424 279 PRINTS 14-3-3 protein zeta signature 173 199 IPR000308 -
Bpe04g00424 279 PRINTS 14-3-3 protein zeta signature 200 226 IPR000308 -
Bpe04g00424 279 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Bpe04g00424 279 PRINTS 14-3-3 protein zeta signature 227 256 IPR000308 -
Bpe04g00424 279 PANTHER 14-3-3 PROTEIN 8 265 IPR000308 -
Bpe04g00424 279 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Bpe04g00424 279 ProSitePatterns 14-3-3 proteins signature 2. 236 255 IPR023409 -
Bpe04g00424 279 PIRSF 14-3-3 6 264 IPR000308 -
Bpe04g00424 279 Pfam 14-3-3 protein 17 254 IPR023410 -
Bpe04g00424 279 Gene3D - 2 264 IPR036815 -
Bpe04g00424 279 SUPERFAMILY 14-3-3 protein 10 256 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00424 Bpe-Chr4:2741658 Bpe06g00098 Bpe-Chr6:1450194 3.12E-158 dispersed
Bpe04g00424 Bpe-Chr4:2741658 Bpe02g01128 Bpe-Chr2:14903829 4.61E-135 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00424 K06630 - qsu:112005245 441.425