Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00453 ATGGCAGGTGCAATGGATCTACACAGTTTTACATCTTCTCTATCAGATCCATATGGAGGTGAGCTAATGGAAGCTCTTGGACCTTATATCAAAAGTGCTTCTTCTCCTCCATCTACCTCTTCTTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTGCTTCTCTTCCTCAAAACTGTTTCTCTTTCTCCCCTTCCCTCCCATCAATGGACTTTTTCGATACAAATGGTTGCTCTGGTTCGACGAACTCTGTAGTTTTAGACGAGTTCTCAACCCAACCTTTTCTTAATTTGGAGCAGCCATGGCCAATTGGCCTAAACCAACTTACCCCAGCTAAAATCTACCAGATTCAAGCTCAGTTCCAGCAGAATTACTCTCCAGATCTTGATTTCGAACGGACCCACCGGCACATATACTCCTGTCATAGTAAGCTAAACTTCCTTGGTCCGAAACGCATTGAAATGAAGCAAGTGGGTTCCCCATTAAAACCGACGAAGCTTTACAGAGGAGTTAGACAGAGGCACTGGGGGAAATGGGTAGCTGAGATTCGTCTCCCGAGGAATCGAACTCGGCTATGGCTTGGCACCTTCGATACGGCAATAGAAGCCGCGTTAGCTTACGACCAAGCTGCTTACAAGCTCAGAGGCGATTTCGCGAGGCTTAATTTTCCAAATCTGAAACACAAAGGTGAATTAGGCGAGTATAAGCCTCTCCATTCCTCCATTGATGCGAAGCTCCAGGCAATTTGCCAAAGCTTGGCTGAATCGCAGAAACAGGGGAAAACAGAGAAGCCTCGCACTGCCCGAAAAGCGCAAAAGGTCCAAGTGCAGCCACCAGTGGACGAAGTGCAGTCGAAAGAAACGGAGATCAACAATCAGGCGAGTAACTCCCCGTCGCCGGCAATAACAGACAGCGACGGGTCAGCAGGATCCTCCCCTTTGTCCGATCTGACGTTTCCGGACATAACAGAGTCCGCATGGGATCAGTTTTCGGAGAATTTCGCGTTGCAGAAATACCCTTCTGAGATTGATTGGGCAGCCATCCTATCTTCCTAA 1050 48.29 MAGAMDLHSFTSSLSDPYGGELMEALGPYIKSASSPPSTSSSSPPPPPPPPASLPQNCFSFSPSLPSMDFFDTNGCSGSTNSVVLDEFSTQPFLNLEQPWPIGLNQLTPAKIYQIQAQFQQNYSPDLDFERTHRHIYSCHSKLNFLGPKRIEMKQVGSPLKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAIEAALAYDQAAYKLRGDFARLNFPNLKHKGELGEYKPLHSSIDAKLQAICQSLAESQKQGKTEKPRTARKAQKVQVQPPVDEVQSKETEINNQASNSPSPAITDSDGSAGSSPLSDLTFPDITESAWDQFSENFALQKYPSEIDWAAILSS 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2901562 2902611 - Bpe015140.1 Bpe04g00453 102262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00453 349 MobiDBLite consensus disorder prediction 29 58 - -
Bpe04g00453 349 Gene3D AP2/ERF domain 165 223 IPR036955 GO:0003700|GO:0006355
Bpe04g00453 349 MobiDBLite consensus disorder prediction 276 316 - -
Bpe04g00453 349 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 345 - -
Bpe04g00453 349 SMART rav1_2 165 228 IPR001471 GO:0003700|GO:0006355
Bpe04g00453 349 CDD AP2 164 224 IPR001471 GO:0003700|GO:0006355
Bpe04g00453 349 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 345 - -
Bpe04g00453 349 SUPERFAMILY DNA-binding domain 165 222 IPR016177 GO:0003677
Bpe04g00453 349 MobiDBLite consensus disorder prediction 254 316 - -
Bpe04g00453 349 PRINTS Ethylene responsive element binding protein signature 188 204 IPR001471 GO:0003700|GO:0006355
Bpe04g00453 349 PRINTS Ethylene responsive element binding protein signature 166 177 IPR001471 GO:0003700|GO:0006355
Bpe04g00453 349 ProSiteProfiles AP2/ERF domain profile. 165 222 IPR001471 GO:0003700|GO:0006355
Bpe04g00453 349 Pfam AP2 domain 166 214 IPR001471 GO:0003700|GO:0006355
Bpe04g00453 349 MobiDBLite consensus disorder prediction 39 56 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01114 Bpe04g00453 CCT
Bpe02g00098 Bpe04g00453 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00453 Bpe-Chr4:2901562 Bpe05g01141 Bpe-Chr5:23686796 6.29E-35 dispersed
Bpe07g00076 Bpe-Chr7:555833 Bpe04g00453 Bpe-Chr4:2901562 2.41E-24 dispersed
Bpe11g00636 Bpe-Chr11:4922287 Bpe04g00453 Bpe-Chr4:2901562 7.03E-21 dispersed
Bpe10g00079 Bpe-Chr10:1135229 Bpe04g00453 Bpe-Chr4:2901562 1.26E-77 transposed
Bpe15g00452 Bpe-Chr15:15948624 Bpe04g00453 Bpe-Chr4:2901562 4.54E-55 transposed
Bpe02g00098 Bpe-Chr2:735724 Bpe04g00453 Bpe-Chr4:2901562 0 wgd
Bpe02g01114 Bpe-Chr2:14782684 Bpe04g00453 Bpe-Chr4:2901562 7.19E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21226 PF00847 AP2 8.60E-15 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00453 K09286 - mnt:21404406 346.665