Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00460 ATGGATAGTAGAAGTTTGTCGTCTTCTCACGATGAACTACAAAACGAGACGTTCATTCATAAAGTGGGTATTCCTCCCAAGCAAAACCTCTTCAAGGAATTCAAGAGCAATTTCAAAGAAACATTTTTCGCAGACGATCCTCTTCGATCTTTCAAGGATCAAACCAAGTCTCAGAAGTTAATCTTAGGCATTCAAGCTGTTTTTCCTATTCTCGAGTGGGGACGAGGTTACAATGTGTCTAAATTTCGAGGGGATCTCATTGCTGGACTGACCATTGCAAGTCTCTGCATTCCTCAGGATATTGGGTATGCAAAGCTGGCCAATTTGGCTCCTCAGTATGGGCTGTACTCAAGCTTTGTTCCGCCATTGATATACGCTTTCATGGGTAGCTCAAGAGATATAGCCATTGGACCAGTTGCTGTCGTTTCTCTCTTGTTAGGGACTCTTCTTCAAGCCGAGATCGATCCCATTACAAACACTGCTGAGTATTTGCGACTTGCATTTACGGCCACTTTTTTTGCCGGAATCACTCAAGCCTCCCTCGGAATTTTGAGGTTGGGATTCTTGATCGACTTCTTATCTCACGCTGCCATCGTCGGATTTATGGGTGGAGCTGCCATTACCATAGCTCTTCAACAGCTCAAGGGATTTCTTGGCATAAAAAAATTCACAAAGAAAACAGATATAATCTCCGTTATGCACTCCGTTATCGGCTCAGCCCGCCATGGGTGGAACTTGGAGACCATAGCCATTGGAGCAAGCTTTTTAACTTTTCTCCTCTTTGCAAAATACATTGGAAAGAAAAACAAGAAACTTTTCTGGGTACCTGCAATTGCTCCTCTGATATCTGTTGTTCTATCCACTGCTTTAGTTTACATTACTCATGCAGAAAAGAAAGGGGTTCAAATTGTGAAACACATAGAGAAAGGAATAAATCCAATATCAGTTGATCAAATATACTTTTCGGGTGATTACCTCATCAAAGGTTTTAGGATCGGGGTTGTTTCCGGAATGATTGCTCTGACGGAAGCCATTGCAATAGGAAGAACATTTGCTGGGATGAAAGACTACCAACTTGATGGAAACAGAGAAATGGTTGCTCTAGGAACTATGAACATCATTGGCTCGATGACTTCCTGCTACGTCGCTACTGGTTCATTTTCTCGTTCGGCCGTGAATTACATGGCCGGCTGTCGAACTGCAGTTTCCAACATTGTGATGTCTGTTGTTGTGTTCCTGACTTTGCTGTTTATCACTCCTCTTTTCAAATACACTCCAAACGCCATTCTTGCAGCCATCATTATATCGGCTGTGATCAACCTGATCGACTTTCAGGCTGCGATTTTGATATGGAAGATCGATAAATTTGATTTTGTGGCTTGCATGGGAGCTTTCTTTGGTGTTGTTTTCGCCTCTGTCGAAATTGGCCTTCTGATTGCAGTCTCTATTTCCTTCGCTAAAATCCTCTTACAAGTTACAAGGCCAAGGACTGCACTTCTCGGCAAAATTCCTCGGACAACAGTGTACAGAAACATCCTACAGTATCCCAATGCGACTAAGGTTCCTGGTGTTTTGATTGTTCGAGTCGATTCTGCAATTTACTTTTCCAACTCAAATTACATCAAAGAAAGGCTATTGAGATGGTTAACAGATGAAGAAGAACAAATAAAGAAATTTCACCAACCAAAAATCAAGTTTTTGGTAGTTGAAATGTCACCTGTTACTGACATTGACACCAGCGGAATTCATGCTTTGGAAGAGTTATATAGGAGTCTCCAAAAGAGAGAAGTTCAGCTTGTTCTAGCAAACCCTGGTTCGGCAGTGGTAGATAAGCTTTATTCATCCGGTTTCGATAGTTTGATCGGCCACGACAACATCTTCCTCACCGTTGCCCAAGCCATCTCGGCCTGTTCTCCAAAATTGGTAGAAGAAGCTTGA 1938 42.36 MDSRSLSSSHDELQNETFIHKVGIPPKQNLFKEFKSNFKETFFADDPLRSFKDQTKSQKLILGIQAVFPILEWGRGYNVSKFRGDLIAGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTLLQAEIDPITNTAEYLRLAFTATFFAGITQASLGILRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDIISVMHSVIGSARHGWNLETIAIGASFLTFLLFAKYIGKKNKKLFWVPAIAPLISVVLSTALVYITHAEKKGVQIVKHIEKGINPISVDQIYFSGDYLIKGFRIGVVSGMIALTEAIAIGRTFAGMKDYQLDGNREMVALGTMNIIGSMTSCYVATGSFSRSAVNYMAGCRTAVSNIVMSVVVFLTLLFITPLFKYTPNAILAAIIISAVINLIDFQAAILIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPRTALLGKIPRTTVYRNILQYPNATKVPGVLIVRVDSAIYFSNSNYIKERLLRWLTDEEEQIKKFHQPKIKFLVVEMSPVTDIDTSGIHALEELYRSLQKREVQLVLANPGSAVVDKLYSSGFDSLIGHDNIFLTVAQAISACSPKLVEEA 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2933503 2936449 - Bpe015147.1 Bpe04g00460 102269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00460 645 ProSiteProfiles STAS domain profile. 514 637 IPR002645 -
Bpe04g00460 645 CDD STAS_SulP_like_sulfate_transporter 515 630 - -
Bpe04g00460 645 Pfam STAS domain 515 633 IPR002645 -
Bpe04g00460 645 SUPERFAMILY SpoIIaa-like 516 638 IPR036513 -
Bpe04g00460 645 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271|GO:0008272
Bpe04g00460 645 Pfam Sulfate permease family 82 462 IPR011547 GO:0016021
Bpe04g00460 645 PANTHER SULFATE TRANSPORTER 1.3 4 644 - -
Bpe04g00460 645 Gene3D STAS domain 494 640 IPR036513 -
Bpe04g00460 645 PANTHER SULFATE TRANSPORTER 4 644 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bpe04g00460 645 TIGRFAM sulP: sulfate permease 69 633 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00460 Bpe-Chr4:2933503 Bpe15g00107 Bpe-Chr15:10053359 0 dispersed
Bpe02g00092 Bpe-Chr2:692098 Bpe04g00460 Bpe-Chr4:2933503 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00460 K17470 - jre:108997232 1064.68