Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00477 GTGCCTGCAACAATGGCGAAGGCCAGAAACCAGAGAAATCCCACAAAAATTGTTCAAAAAAATGAAAACTACCCACCCCAGAAGACAGAAAAGCCGCCACCTTGGTCGGTGGTTAGGGGCCTATTGAGCTGTAGGTATCTCCAACCCCAACCACAATCTCTACAAATGGTGAGAAAAGAGCAGCAGAATCTCAAACTAGAAACATCCATGGAGGAGAATGGCAAGAAATGCAAGAAAATGAGATGGTCCGGCTCACTTTGTAGCAACACGAAGATAGTGCAAAGGCATGATCAAACTGGGTTTCCTCAGGTCCACAAGAAAAGGACTTCTTTTAACGCAGGAAACGATGACTACTCTTCGAGTAGATCCATGAAAGCTCCTCTACGTGAACTCAATGGGGTCGCCATTTCTGCCTTTTCTTCTTCTTCTTTATCTGCATCCTCAAACTCCTCCAACGGCGGCTCTTCTAGATCGGGGAAGTCTTTCAGAAAATTCTATGGCTGTTATGAGTGTAAGATGGTCGTTGATCCTGTTCTTGGAGTCATTAGAGATCCTTCTCTCAGAGATACTATTTTTCCTTGTCCTGAATGTCGTGAAATCTTCAACAAGGCTGAAAGTTTGGAGCTTCATAAATCCATCAGCCACGCAGTTTCTGAACTGGGTCCTGAGGATACAAGCAGGAACGTGGTAGAAATCATATTCCAGTCAAGCTGGCTAAAGAAACAAGCCCCTGTTTGCAAAATCGACCGAATACTCAAAGTCCACAACACCCAAAAGACAATCTGCAAATTCGAGGAGTACAGAGACGCCATTAAAGTCAAATCAACAAAGCTTCCAAAGAAGCACCCACGGTGCATAGCTGATGGCAATGAGCTCCTTAGATTCCACTGCACCACTTTGGCCTGCGCGCTCGGCCAAAACGGGTCATCCAATCTCTGCACCGCAATCACCCGCTGCAGCGTCTGCAGCATCATAAAGAACGGCTTCAAAGTATCCCCGGAAGAGGGAGTTCTGACGACAGCGACGAGTGGGAAAGCCCACGACAGTGCAGAAGCTACGCCGGACGGTGAGGGGCGGCGGGCGATGCTGGTTTGCCGGGTGATTGCAGGGAGAGTAAGGAGGAGCTCGGAAATGAGTAGGGAAGAGTACGATTCGGTGGGAGGTGCAATGGAAGTGTATTCCAATTTGGAAGAGTTGCGCGTCTTCAATCCAAACGCTATTCTGCCTTGTTTTGTCGTCATCTACGGAGGGTTT 1254 47.93 VPATMAKARNQRNPTKIVQKNENYPPQKTEKPPPWSVVRGLLSCRYLQPQPQSLQMVRKEQQNLKLETSMEENGKKCKKMRWSGSLCSNTKIVQRHDQTGFPQVHKKRTSFNAGNDDYSSSRSMKAPLRELNGVAISAFSSSSLSASSNSSNGGSSRSGKSFRKFYGCYECKMVVDPVLGVIRDPSLRDTIFPCPECREIFNKAESLELHKSISHAVSELGPEDTSRNVVEIIFQSSWLKKQAPVCKIDRILKVHNTQKTICKFEEYRDAIKVKSTKLPKKHPRCIADGNELLRFHCTTLACALGQNGSSNLCTAITRCSVCSIIKNGFKVSPEEGVLTTATSGKAHDSAEATPDGEGRRAMLVCRVIAGRVRRSSEMSREEYDSVGGAMEVYSNLEELRVFNPNAILPCFVVIYGGF 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3012432 3013776 + Bpe025626 Bpe04g00477 102286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00477 418 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 35 415 - -
Bpe04g00477 418 ProSitePatterns Zinc finger C2H2 type domain signature. 194 215 IPR013087 -
Bpe04g00477 418 Gene3D - 215 416 - -
Bpe04g00477 418 SUPERFAMILY ADP-ribosylation 217 416 - -
Bpe04g00477 418 MobiDBLite consensus disorder prediction 8 26 - -
Bpe04g00477 418 ProSiteProfiles Zinc finger C2H2 type domain profile. 192 220 IPR013087 -
Bpe04g00477 418 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 35 415 - -
Bpe04g00477 418 MobiDBLite consensus disorder prediction 104 122 - -
Bpe04g00477 418 MobiDBLite consensus disorder prediction 1 34 - -
Bpe04g00477 418 MobiDBLite consensus disorder prediction 98 122 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01625 Bpe04g00477 CCT
Bpe02g00078 Bpe04g00477 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00246 Bpe-Chr4:1648146 Bpe04g00477 Bpe-Chr4:3012432 1.12E-97 dispersed
Bpe04g00477 Bpe-Chr4:3012432 Bpe05g00138 Bpe-Chr5:3254886 6.34E-92 dispersed
Bpe02g01625 Bpe-Chr2:19116278 Bpe04g00477 Bpe-Chr4:3012432 1.60E-138 wgd
Bpe02g00078 Bpe-Chr2:591296 Bpe04g00477 Bpe-Chr4:3012432 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21228 None None None None Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00477 - - zju:107421015 529.25