Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00477 | GTGCCTGCAACAATGGCGAAGGCCAGAAACCAGAGAAATCCCACAAAAATTGTTCAAAAAAATGAAAACTACCCACCCCAGAAGACAGAAAAGCCGCCACCTTGGTCGGTGGTTAGGGGCCTATTGAGCTGTAGGTATCTCCAACCCCAACCACAATCTCTACAAATGGTGAGAAAAGAGCAGCAGAATCTCAAACTAGAAACATCCATGGAGGAGAATGGCAAGAAATGCAAGAAAATGAGATGGTCCGGCTCACTTTGTAGCAACACGAAGATAGTGCAAAGGCATGATCAAACTGGGTTTCCTCAGGTCCACAAGAAAAGGACTTCTTTTAACGCAGGAAACGATGACTACTCTTCGAGTAGATCCATGAAAGCTCCTCTACGTGAACTCAATGGGGTCGCCATTTCTGCCTTTTCTTCTTCTTCTTTATCTGCATCCTCAAACTCCTCCAACGGCGGCTCTTCTAGATCGGGGAAGTCTTTCAGAAAATTCTATGGCTGTTATGAGTGTAAGATGGTCGTTGATCCTGTTCTTGGAGTCATTAGAGATCCTTCTCTCAGAGATACTATTTTTCCTTGTCCTGAATGTCGTGAAATCTTCAACAAGGCTGAAAGTTTGGAGCTTCATAAATCCATCAGCCACGCAGTTTCTGAACTGGGTCCTGAGGATACAAGCAGGAACGTGGTAGAAATCATATTCCAGTCAAGCTGGCTAAAGAAACAAGCCCCTGTTTGCAAAATCGACCGAATACTCAAAGTCCACAACACCCAAAAGACAATCTGCAAATTCGAGGAGTACAGAGACGCCATTAAAGTCAAATCAACAAAGCTTCCAAAGAAGCACCCACGGTGCATAGCTGATGGCAATGAGCTCCTTAGATTCCACTGCACCACTTTGGCCTGCGCGCTCGGCCAAAACGGGTCATCCAATCTCTGCACCGCAATCACCCGCTGCAGCGTCTGCAGCATCATAAAGAACGGCTTCAAAGTATCCCCGGAAGAGGGAGTTCTGACGACAGCGACGAGTGGGAAAGCCCACGACAGTGCAGAAGCTACGCCGGACGGTGAGGGGCGGCGGGCGATGCTGGTTTGCCGGGTGATTGCAGGGAGAGTAAGGAGGAGCTCGGAAATGAGTAGGGAAGAGTACGATTCGGTGGGAGGTGCAATGGAAGTGTATTCCAATTTGGAAGAGTTGCGCGTCTTCAATCCAAACGCTATTCTGCCTTGTTTTGTCGTCATCTACGGAGGGTTT | 1254 | 47.93 | VPATMAKARNQRNPTKIVQKNENYPPQKTEKPPPWSVVRGLLSCRYLQPQPQSLQMVRKEQQNLKLETSMEENGKKCKKMRWSGSLCSNTKIVQRHDQTGFPQVHKKRTSFNAGNDDYSSSRSMKAPLRELNGVAISAFSSSSLSASSNSSNGGSSRSGKSFRKFYGCYECKMVVDPVLGVIRDPSLRDTIFPCPECREIFNKAESLELHKSISHAVSELGPEDTSRNVVEIIFQSSWLKKQAPVCKIDRILKVHNTQKTICKFEEYRDAIKVKSTKLPKKHPRCIADGNELLRFHCTTLACALGQNGSSNLCTAITRCSVCSIIKNGFKVSPEEGVLTTATSGKAHDSAEATPDGEGRRAMLVCRVIAGRVRRSSEMSREEYDSVGGAMEVYSNLEELRVFNPNAILPCFVVIYGGF | 418 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3012432 | 3013776 | + | Bpe025626 | Bpe04g00477 | 102286 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00477 | 418 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 35 | 415 | - | - | |
Bpe04g00477 | 418 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 194 | 215 | IPR013087 | - | |
Bpe04g00477 | 418 | Gene3D | - | 215 | 416 | - | - | |
Bpe04g00477 | 418 | SUPERFAMILY | ADP-ribosylation | 217 | 416 | - | - | |
Bpe04g00477 | 418 | MobiDBLite | consensus disorder prediction | 8 | 26 | - | - | |
Bpe04g00477 | 418 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 192 | 220 | IPR013087 | - | |
Bpe04g00477 | 418 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 35 | 415 | - | - | |
Bpe04g00477 | 418 | MobiDBLite | consensus disorder prediction | 104 | 122 | - | - | |
Bpe04g00477 | 418 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Bpe04g00477 | 418 | MobiDBLite | consensus disorder prediction | 98 | 122 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g01625 | Bpe04g00477 | CCT | |
Bpe02g00078 | Bpe04g00477 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00246 | Bpe-Chr4:1648146 | Bpe04g00477 | Bpe-Chr4:3012432 | 1.12E-97 | dispersed | |
Bpe04g00477 | Bpe-Chr4:3012432 | Bpe05g00138 | Bpe-Chr5:3254886 | 6.34E-92 | dispersed | |
Bpe02g01625 | Bpe-Chr2:19116278 | Bpe04g00477 | Bpe-Chr4:3012432 | 1.60E-138 | wgd | |
Bpe02g00078 | Bpe-Chr2:591296 | Bpe04g00477 | Bpe-Chr4:3012432 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21228 | None | None | None | None | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00477 | - | - | zju:107421015 | 529.25 |