Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00480 ATGGGTTTGCTGAGAGTGCAAGACATAGCCGCCATTTCTTCGTACGCAATTCCGGCGGAGTTCATCAGATCAGAATCTGAACAACCAGGTATGACGACCGTTCATGGCGAAACTCTTGAGGTTCCAGTGATTGATTTTAGTAGCCCAGATGAGGAAAAAGTCGATCAGGCCATTCAAGAAGCAAGTATAGAATGGGGGATGTTTCAGATCCTCAACCATGAAATACCCAGCGAGGTCATAGCCAAATTGCAGAGGGTTGGAAAAGAATTTTTCGAATTACCAGGAGAAGAAAAAGAGGTTTGCGCTAAGATACCTGGATCGGACTCTGTCGAAGGATATGGAACTGAGCTTCAAAAGGAAGTAGAAGGAAACAAAGGTTGGGTCGACCATTTGTTTCACAAGATATGGCCTCCTTCCGCCATTAATTATCAGTTTTGGCCTAAGAACATACCTGCTTACAGGGAAGCGAATGAGGATTATGCGAAATACTTGCATAGGGTGGTAGAGAAGCTGTTTAAAAGCCTTGCCCTAGGGCTGGGTCTTGAAGGAGACGAGCTGAAGGCGGCGGCGGGTGGGGAGAATCTGGTTTATCTCCTGAAGATAAACTACTATCCTCCATGTCCACGCCCAGATGTTGCTCTTGGCGTCGTAGCTCACACAGACATGTCTACCATCACCATTCTCGTCCCGAATGAAGTTCAGGGCCTCCAAGCTTTCAGAGATGGCCACTGGTATGACGTCAAATACGTCCCCAATGCCCTCGTCGTTCACATCGGCGACCAAATGGAGATATTGAGCAACGGCAAGTACAGGAGTGTTCTTCATAGGACGACAGTGAACAAAGAGAGAACAAGAATGTCGTGGCCAGTTTTCCTGGAACCTCCTGCAGATCTGATGGTCGGGCCTCACCCAAAGACTGTGAGCGAAGACAAGCCGCCCAAATACAAGATCAAGAAATACAGTCACTACGTTTACTGCAAACTCAACAAGATCCCTCAGTAG 1002 47.5 MGLLRVQDIAAISSYAIPAEFIRSESEQPGMTTVHGETLEVPVIDFSSPDEEKVDQAIQEASIEWGMFQILNHEIPSEVIAKLQRVGKEFFELPGEEKEVCAKIPGSDSVEGYGTELQKEVEGNKGWVDHLFHKIWPPSAINYQFWPKNIPAYREANEDYAKYLHRVVEKLFKSLALGLGLEGDELKAAAGGENLVYLLKINYYPPCPRPDVALGVVAHTDMSTITILVPNEVQGLQAFRDGHWYDVKYVPNALVVHIGDQMEILSNGKYRSVLHRTTVNKERTRMSWPVFLEPPADLMVGPHPKTVSEDKPPKYKIKKYSHYVYCKLNKIPQ 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3025552 3026741 - Bpe015164.1 Bpe04g00480 102289

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00480 333 Pfam non-haem dioxygenase in morphine synthesis N-terminal 41 148 IPR026992 -
Bpe04g00480 333 Pfam 2OG-Fe(II) oxygenase superfamily 199 294 IPR044861 -
Bpe04g00480 333 Gene3D - 2 331 IPR027443 -
Bpe04g00480 333 SUPERFAMILY Clavaminate synthase-like 3 331 - -
Bpe04g00480 333 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 194 294 IPR005123 -
Bpe04g00480 333 PANTHER OS02G0767300 PROTEIN 13 330 - -
Bpe04g00480 333 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 13 330 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00480 K05278 FLS; flavonol synthase [EC:1.14.20.6] - jre:108991214 530.02
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00480 Bpe-Chr4:3025552 Bpe07g00134 Bpe-Chr7:955751 2.90E-89 dispersed
Bpe02g01631 Bpe-Chr2:19137466 Bpe04g00480 Bpe-Chr4:3025552 7.39E-169 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g305 . . . . . Bpe04g00480 . . Cmo04g02456 . . . . . . . . . . . . . . . Cla08g00561 Cam08g0978 Cec08g0568 Cco08g0677 Clacu08g0685 . Cre08g0500 . . . . . . . . . Blo18g00190 . Bda01g01416 . . Bma01g00830 . . . . . . Car04g02274 . Cpe01g02036 . . . . . . . . . . . . . . . Lsi08g00410 . Chy03g00353 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003902 1 1 2 3 2 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 2 1 1 1 1 1 1 2 2 43
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe04g00480 Bpe_Chr04 FPKM 19.216387 21.816725 61.64999 62.820698 51.006664 48.848976 54.989574 101.886147 102.675171 114.791725