Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00487 ATGTTTCGTATTTGCAGGAAAACACGACCAAAGATGACTTTGCCCGTCTTTTCAAGGATAATGCTTCTTGCTTTCCTCGAGCCTGTGCTTGATCAAAACCTTTACTACGTGGGAATGAAGTATACTTCAGCAACCTTTGCATCTGCCATTGTCAATGTTCTCCCCGCCGTGACTTTCATCATGGCAATCATTTTCAGGCTGGAGAGTGTGAACTTGAAGAAAATAGAGAGCATAGCGAAGGTCGGCGGAACGGCAGTGACTGTGACAGGAGCCATGATAATGACGATGTACAAAGGGCCTCTCGTCGATATCATACACGGGAATGGCCCGATTGGAGTCCACCATGCTGCCTCTAATCAATCGAATTCCGATCAACACTGGGTCACTGGTACTCTCATGCTCTTGTGCAGTTGCTGCGGCTGGGCTGCCTTCTTCATTTTGCAATCGTTCACGTTAAAGAAGTACCCGGCGGAGCTATCGCTGAGTGGGTGGATATGCCTGATGGGGACGGTGGAAGGCGCGGCGGTGTCGCTCGCGATGGAACGAGACATGAGCGCTTGGGTTTTAGGTTGGGATTCGAGGCTTCTGGCAGCTGCTTACACAGGAGTGGTTTGCTCTGGAATTGCATATTACCTACAGGGAGTGGTGATCAAAGAGAAAGGCCCCGTTTTTGTGACCTCTTTCAGCCCTCTAATCATGATCATCACAGCTGCTCTGGGTACCATCATTTTGGCCGAGAAAATCCACCTAGGAAGCATAATTGGGGCCATTCTGATAGTCGTGGGGCTGTACACAGTCGTGTGGGGCAAAAGCAAAGACCAGAAAAACAGCAGAAAGATAACAGAGGGCGAGGAGAGTGACGTTCAGCTGCCCATCACTCGCACCGGAAAATCTGCGTCGCCTCACTGCAATCACGTCGACGCCGTCTCAAAGCCCCCTGCTCTCGCCTCCCACCTGTGA 960 50.94 MFRICRKTRPKMTLPVFSRIMLLAFLEPVLDQNLYYVGMKYTSATFASAIVNVLPAVTFIMAIIFRLESVNLKKIESIAKVGGTAVTVTGAMIMTMYKGPLVDIIHGNGPIGVHHAASNQSNSDQHWVTGTLMLLCSCCGWAAFFILQSFTLKKYPAELSLSGWICLMGTVEGAAVSLAMERDMSAWVLGWDSRLLAAAYTGVVCSGIAYYLQGVVIKEKGPVFVTSFSPLIMIITAALGTIILAEKIHLGSIIGAILIVVGLYTVVWGKSKDQKNSRKITEGEESDVQLPITRTGKSASPHCNHVDAVSKPPALASHL 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3063383 3064835 + Bpe015170.1 Bpe04g00487 102296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00487 319 MobiDBLite consensus disorder prediction 276 303 - -
Bpe04g00487 319 PANTHER WAT1-RELATED PROTEIN 5 287 IPR030184 GO:0016021|GO:0022857
Bpe04g00487 319 PANTHER WAT1-RELATED PROTEIN 5 287 - -
Bpe04g00487 319 SUPERFAMILY Multidrug resistance efflux transporter EmrE 187 272 - -
Bpe04g00487 319 Pfam EamA-like transporter family 129 267 IPR000620 GO:0016020|GO:0016021
Bpe04g00487 319 Pfam EamA-like transporter family 11 79 IPR000620 GO:0016020|GO:0016021
Bpe04g00487 319 SUPERFAMILY Multidrug resistance efflux transporter EmrE 13 96 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00487 Bpe-Chr4:3063383 Bpe04g01845 Bpe-Chr4:23693176 8.64E-101 dispersed
Bpe02g00072 Bpe-Chr2:562039 Bpe04g00487 Bpe-Chr4:3063383 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00487 - - mesc:110605754 427.557