Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00534 ATGTACAAGTTCTACAAGCTTGTTGAGCATGAAAGCAGGCCTGGTGATTATATGGATTCACAACCTGAGATAAATGTTCAAATGAGATCTATTCTGGTGGATTGGCTGGTTGATGTTCATAACAGATTCGAACTTTGCCCTGAAACATTCTACCTCGCAATCAACATAATCGACCGATTTCTGGCAGCCAAGAAGGTGTTGAGAAAAGAACTGCAGTTGGTGGGAATAAGTGCAATGCTGATAGCCTCAAAATACGAAGAAATCTGGGCTCCTTTGGTTGACGACTTTGTCTGTCTTTCAAACAGAGCTTACACCCCTGATCAAGTTTTGAAGATGGAGAAAACAATTCTGGGAGAGCTCGAATGGACATTGACAGTGCCTACGCCATACGTGTTTCTTGTTCGGTTCATCAAGGCCTCCAAAGATGTGGATTTAGAAATGGAGAATATGGTTTACTTTTTAGCTGAACTGGGAATGATGCATTATGCGGCTGTGATAATGTACTCCCCATCGATGATTGCTGCCTCGGCAGTCTACGTTGCTCGATGTACTCTGAACAAGAACACTGCTTGGAATGAAACTCTGAAGTTCCATTCTGGCTTTTCGGAATCACAGCTCCTTGATTGTGCGAAATTGTTGGTGGGCTTCCACGAAATGACGAGTAAGAGCCGGCTGCAGGTCGTGTGCAAGAAGTACTCGAAGTCGGAGAGAGGTGGTGTGGCTCTGCTTCAGCCGGCCAACAAATTGGGGCCGGCCGGTGACGGGCTGTGA 771 45.91 MYKFYKLVEHESRPGDYMDSQPEINVQMRSILVDWLVDVHNRFELCPETFYLAINIIDRFLAAKKVLRKELQLVGISAMLIASKYEEIWAPLVDDFVCLSNRAYTPDQVLKMEKTILGELEWTLTVPTPYVFLVRFIKASKDVDLEMENMVYFLAELGMMHYAAVIMYSPSMIAASAVYVARCTLNKNTAWNETLKFHSGFSESQLLDCAKLLVGFHEMTSKSRLQVVCKKYSKSERGGVALLQPANKLGPAGDGL 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3391110 3392220 - Bpe015212.1 Bpe04g00534 102343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00534 256 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 1 251 - -
Bpe04g00534 256 Gene3D - 1 241 - -
Bpe04g00534 256 Gene3D - 14 125 - -
Bpe04g00534 256 SMART Cyclin_C_2 127 246 IPR004367 -
Bpe04g00534 256 ProSitePatterns Cyclins signature. 29 60 IPR006671 -
Bpe04g00534 256 SMART cyclin_7 34 118 IPR013763 -
Bpe04g00534 256 SMART cyclin_7 131 215 IPR013763 -
Bpe04g00534 256 Pfam Cyclin, N-terminal domain 2 124 IPR006671 -
Bpe04g00534 256 CDD CYCLIN 125 214 IPR013763 -
Bpe04g00534 256 SUPERFAMILY Cyclin-like 126 247 IPR036915 -
Bpe04g00534 256 CDD CYCLIN 28 117 IPR013763 -
Bpe04g00534 256 PIRSF Cyclin_A_B_D_E 1 254 IPR039361 -
Bpe04g00534 256 Pfam Cyclin, C-terminal domain 127 245 IPR004367 -
Bpe04g00534 256 SUPERFAMILY Cyclin-like 6 124 IPR036915 -
Bpe04g00534 256 PANTHER CYCLINS 1 251 IPR039361 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00023 Bpe04g00534 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00337 Bpe-Chr1:2116089 Bpe04g00534 Bpe-Chr4:3391110 4.74E-103 dispersed
Bpe02g00310 Bpe-Chr2:2043718 Bpe04g00534 Bpe-Chr4:3391110 1.78E-72 dispersed
Bpe04g00534 Bpe-Chr4:3391110 Bpe15g00922 Bpe-Chr15:19000299 3.93E-57 dispersed
Bpe02g00023 Bpe-Chr2:208686 Bpe04g00534 Bpe-Chr4:3391110 8.24E-160 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00534 K21777 - csv:101217210 380.948