Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00544 | ATGACTGTGACTCCGAGGATCTCCATTAACGACGGGAACCTGGTGGTTCATGGAAAGACCATACTGACTGGAATCCCAGACAACATTGTGTTGACACCAGCATCCGGTCTGGGACTCGTCGCTGGTGCATTTATTGGTGCTACGGCTTCCCATACCAAAAGCCTTCATGTCTTCCCCGTGGGTGTCCTTGAGGACCTTCGATTCATGTGTTGTTTCCGATTTAAATTATGGTGGATGACTCAGAGGATGGGAAATTGTGGAAAAGAAATTCCATTGGAGACCCAATTCCTGCTCGTGGAGAGCAAAGACAACAATGAAAGAGGAAATCATGATGTCTCTCCAACAATATACACTATTTTCCTTCCTTTACTTGAAGGCCAATTCCGTGCTGTTCTTCAAGGGAATGACAAAAATGAGGTCGAGATCTGCCTGGAGAGTGGCGACGATTCTATTGAGACGAATCAAGGTCTTAACCTAGTTTACGTGCACGCTGGGACAAATCCGTTTGAAGTTACTAGTCAAGCTGTAAATTTCTTTGATCTGGGTTCTTGTATCATAGAAAGTTTGATGTACGTGTTCGCATGCTTTTGTGATTTCAAATTTTCTTATTTTCTCAACAGGGCTGTAGAAAAGCACACCCAAGCTTTTCATCATCGCGAGAGGAAGAAGTTGCCTTCTTTCCTTGACTGGTTTGGTTGGTGCACATGGGATGCGTTTTACACTGATGTCACGGCTGAAGGAGTTGAAGAAGGCCTCAAAAGCTTGTCAGAAGGAGGAACTCCTCCTAGATTCTTAATCATAGATGATGGTTGGCAACAGATAGAGAGCAGAGGAAAGGATGCTGATTGCGAGGTTCAAGAAGGAGCACAATTTGCTAGTAGATTGACAGGAATAAAAGAGAACGCAAAATTCCAAAAGAATGGACAGAATGACGGACATGTCTCTGGACTGAAGCATGTTGTGGATGGAGCCAAGCAACATTACAATGTGAAGAATGTGTATGTGTGGCATGCTCTAGCTGGATATTGGGGTGGAGTACAGCCATTAGCTGCCGGCATGGAACATTACGACTCTGTTTTGGCGTATCCGATTCAGTCCCCGGGTGTTCTGGGTAATCAACCTGACATTGTCATGGATAGTCTAGCTGTTCATGGCCTGGGTCTTGTGCATCCAAAGAAAATATTCAACTTCTACAATGAACTTCATTCCTACTTAGCTTCATGTGGAGTAGATGGAGTAAAAGTTGATGTGCAAAACATTATTGAAACCCTTGGGGTTGGTCATGGTGGCAGAGTATCTCTGACTCGCAGCTACCATCAGGCACTGGAAGCTTCGATTTCTCGAAACTTTCCTGACAATGGATGTATTGCCTGCATGTGTCACAACACCGATGGACTCTACAGTGCTAAACAGACGGCTGTGGTCAGGGCTTCCGATGACTTCTATCCTCGGGATCCCACGTCTCACACCATTCATATTTCATCTGTGGCGTACAATACTCTCTTTCTTGGAGAATTCATGCAACCCGACTGGGATATGTTCCAAAGCCTACATCCTTCTGCTGAGTATCATGGTGCAGCTCGAGCAATTGGTGGATGCGCAATCTATGTCAGTGACAAGCCAGGAAACCACAACTTTGAACTATTAAAGAAGCTGGTTCTCCCTGATGGATCTGTTCTCCGTGCTCAACTGCCTGGAAGACCAACTCGTGATTCCCTATTCGTTGATCCTGCTAGAGATGGAACCAGCTTGCTCAAAATTTGGAATATGAACAAGTGCTCCGGTGTGGTTGGGGTGTTCAACTGCCAAGGCGCTGGTTGGTGTAAGATCACCAAGAAGACCCGCATTCACGATGAATCTCCCGGTACTCTTACCTGTTCTGTCTATGCTAACGATGTCGAGAACATTTCTCAAATTGCCGGTCCAGATTGGAATGAGGAGACTGCAGTCTATTCCTACAAATCCGGAGAGTTGATCCGACTACCAAAAGGAGTTTCTTTGCCTGTTACACTCAAGGTCCTTGAATATGAACTTTTCCATTTCTGTCCAATCAAAGAAATCACCTCCTACATTTCAATTGCACCAATTGGTCTACTTGACATGTTCAATGTCGGTGGCGCTGTGGACCAAGTCGAGATCAACCTCATATCAAAATCTGACAAGCCACATGAGCTCTTTGACGGTGAAGTTCAATCTGAGCTGACCACTTCACTGAGCAAAAACCGATCCCCGACTGCAACAATCACGTTCAAAGTCAGAGGTTGCGGCCGATTTGGTGCATACTCATCTCAAATTCCGCTCAAGTGCAAGGTTGACAATACCGACACAAACTTTGACTATGATGCCACAACTGGACTCACTACACTTACCATTCCCGTCCCAAGAGAGGATATGTTTAGATGGTCGGTGGAGATTCAATTTTGTGCTGGGTGTCTTTTTTTTTTCCTCCTTCAGGCAAAAGCATCAAAGCAGATCGGCGGACGTCAAGTTTGCCAAATCTGCAGTGACTCTGTTGGAAAAACTGTTGATGGGGAGCCGTTTGTTGCGTGCAATGTTTGTAATTTTCCTGTTTGTAGACCCTGCTATGAGTATGAAAGAAAGGATGGAAATAAGTCCTGTCCTCAATGCAAGACTAAATACAAGTGGCTTAAAGGAAGTCCTCTGGTTAATGGGGAAGAAGGAGATGATTCTGATGTTAACGGAGGGGCGAATGCTCACAATTACAATTCTAGTGAAGGAGATATGAAGTATAAGCTACCTGAACGTACGCTTAGTTGGGATACAAACTATGATAAAGAAGGATCCTTCAATCATATTCCATTGCTCACCACTGGACGCTCTGTTTCTGGAGACCTATCAGCTGCATCCCCTGAACGCCTTTCAATGGCGTCTCCAGAAAGCTTGAGCAGGACTAATTATAGAATAGTGGACCCTTCGAGAGAGGCTGGGTCGAATGGACTTGGAGGTGTAGCCTGGAAAGAGAGAATTGATGGTTGGAAGATGAAGCAGGAGAAGAGTCATCCTCCAATGAGTAGCCATGCTCCCTCTGAAGGTAGAGGAGGCGCAGACTTTGATACCAGTACTGATATTGTTATGGATGATTCTTTGCTAAATGATGAAGCGCGCCAGCCTTTATCAAGGAAGGTTTCTGTTTCATCCTCCAGGATCAATCCGTACAGGATGGTTATAGTTCTACGTCTTGTTATTCTTTCCATCTTCCTCCATTACCGTTTAACAAACCCGGTTCCCAATGCATATGCTTTATGGTTAATATCTGTCATTTGTGAGATATGGTTTGCATTTTCATGGATTTTGGATCAATTCCCCAAGTGGCTCCCTGTGAACCGTGAGACCTATCTTGATAGGCTAGCACTGAGATATGATAGAGAAGGAGAGCCTTCTCAGTTGGCGGCTGTAGACATTTTTGTGAGTACGGTTGACCCTCTAAAGGAACCTCCTCTTGTCACGGCCAACACTGTTTTGTCTATTCTGGCAGTGGACTACCCAGTCGACAAAGTTTCTTGCTATGTCTCAGATGATGGAGCTGCTATGTTGACATTTGAAGCTTTGTCTGAAACATCTGAATTTGCAAAAATATGGGTTCCTTTCTGCAAAAAATATAACATTGAGCCAAGAGCTCCAGAGTGGTATTTTTCAAAGAAGATTGACTATTTGAAAGATAAGGTTCAACCATCATTTGCCAAAGATCGAAGGGCGATGAAGAGGGAGTACGAAGAGTTTAAAATAAGAATCAATGTACTTGTTGCAAAGGCGCAAAAGATTCCTGATGAAGGGTGGATCATGCAAGATGGAACCCCTTGGCCTGGAAATAATACCAGAGACCATCCAGGAATGATCCAGGTTTTCCTAGGACAGAGTGGAGGGCTCGACAGTGAGGGTAATGAGCTACCCCGGTTAGTTTATGTATCTCGTGAGAAGCGGCCTGGATTTCAGCACCACAAGAAGGCTGGTGCCATGAACGCACTTGTTCGTGTGTCAGCTGTGCTTACAAATGGACCCTTCTTATTAAATCTCGATTGTGATCATTACATAAACAACAGCAAGGCATTGAGGGAAGCTATGTGTTTTCTAATGGATCCAAATCTTGGCAAGTCTGTTTGTTATGTTCAATTTCCTCAGAGATTTGATGGAATTGACAGAAACGATCGATATGCAAATCGAAACACAGTGTTCTTTGATATCAATTTAAGGGGCTTGGACGGCATCCAAGGTCCAGTTTACGTCGGAACAGGATGTGTTTTCAATCGAACTGCCTTGTATGGTTACGAGCCACCTGTCAAGTCTAAGCATAAGAAACGAGGACTATTCTCTTTTGGTGGGAAAAAGAGTTCGAAATCAAGTAGGAAGGGCTCTGATGGTAAAAAATCGAGCAAGCATGCTGACCCCACCGTGCCAATATTTAACCTAGAGGATATTGAGGAAGGAGTTGAAGGTTCTGGGTTTGATGATGAGAAGTCACTGCTCATGTCACAGATGAGCCTGGAGAAGAGGTTTGGTCAATCAGCCGTTTTTGTTGCTTCGACATTGATGGAGAATGGTGGGGTTCCACAGTCAGCCATTGCTGAATCCCTCCTCAAAGAAGCTATTCACGTCATTAGTTGTGGATATGAAGACAAGACAGAGTGGGGAACTGAGATAGGATGGATCTATGGCTCTGTTACAGAGGATATTCTTACGGGTTTTAAGATGCATGCTCGTGGATGGAGATCGATCTACTGCATGCCAAAGCTTGCAGCATTTAAAGGATCAGCTCCGATAAATCTTTCCGATCGTCTAAATCAAGTGCTGCGATGGGCATTAGGTTCAGTTGAAATTCTTTTTAGTCGTCACTGTCCTATATGGTATGGCTATGGAGGAAGGCTCAAATGGCTTGAGAGATTTGCTTACATTAATACCACCATTTACCCATTGACATCTATCCCTCTTCTTGCCTACTGCACATTGCCGGCCATATGTCTGCTCACTGGCCAGTTCATCATTCCACAGATTAGTAACATTGCCAGTATCTGGTTCATATCTCTCTTTCTTTCAATCTTCGCCACCGGAATATTAGAAATGAGATGGAGTGGCGTTGGTATTGACGAATGGTGGAGAAACGAACAATTCTGGGTTATCGGTGGTGTGTCGGCCCATCTCTTCGCTGTTTTCCAAGGCCTGCTCAAAGTCCTTGCCGGAATCGACACAAATTTCACTGTCACCTCCAAAGCTTCCGATGAAGATGGCGATTTTGCCGAGCTCTACATGTTCAAATGGACAACTCTCCTCATCCCTCCGACGACTCTGCTCATCATCAACTTAGTCGGAGTAGTTGCGGGAGTCTCTTATGCCGTTAACAGTGGCTACCAATCGTGGGGTCCTCTTTTTGGGAAGCTGTTTTTTGCTTTCTGGGTGATCATCCATCTTTATCCATTCCTTAAAGGTCTGATGGGGCGCCAGAATCGAACACCCACCATCGTTGTAGTCTGGTCTATTCTCCTTGCTTCCATTTTCTCGTTGCTGTGGGTTCGAATTGATCCTTTTACCACCCGAGTTACCGGTCCTGATGTCCAACAGTGTGGAATCAACTGCTAG | 5592 | 44.78 | MTVTPRISINDGNLVVHGKTILTGIPDNIVLTPASGLGLVAGAFIGATASHTKSLHVFPVGVLEDLRFMCCFRFKLWWMTQRMGNCGKEIPLETQFLLVESKDNNERGNHDVSPTIYTIFLPLLEGQFRAVLQGNDKNEVEICLESGDDSIETNQGLNLVYVHAGTNPFEVTSQAVNFFDLGSCIIESLMYVFACFCDFKFSYFLNRAVEKHTQAFHHRERKKLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTPPRFLIIDDGWQQIESRGKDADCEVQEGAQFASRLTGIKENAKFQKNGQNDGHVSGLKHVVDGAKQHYNVKNVYVWHALAGYWGGVQPLAAGMEHYDSVLAYPIQSPGVLGNQPDIVMDSLAVHGLGLVHPKKIFNFYNELHSYLASCGVDGVKVDVQNIIETLGVGHGGRVSLTRSYHQALEASISRNFPDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPRDPTSHTIHISSVAYNTLFLGEFMQPDWDMFQSLHPSAEYHGAARAIGGCAIYVSDKPGNHNFELLKKLVLPDGSVLRAQLPGRPTRDSLFVDPARDGTSLLKIWNMNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTCSVYANDVENISQIAGPDWNEETAVYSYKSGELIRLPKGVSLPVTLKVLEYELFHFCPIKEITSYISIAPIGLLDMFNVGGAVDQVEINLISKSDKPHELFDGEVQSELTTSLSKNRSPTATITFKVRGCGRFGAYSSQIPLKCKVDNTDTNFDYDATTGLTTLTIPVPREDMFRWSVEIQFCAGCLFFFLLQAKASKQIGGRQVCQICSDSVGKTVDGEPFVACNVCNFPVCRPCYEYERKDGNKSCPQCKTKYKWLKGSPLVNGEEGDDSDVNGGANAHNYNSSEGDMKYKLPERTLSWDTNYDKEGSFNHIPLLTTGRSVSGDLSAASPERLSMASPESLSRTNYRIVDPSREAGSNGLGGVAWKERIDGWKMKQEKSHPPMSSHAPSEGRGGADFDTSTDIVMDDSLLNDEARQPLSRKVSVSSSRINPYRMVIVLRLVILSIFLHYRLTNPVPNAYALWLISVICEIWFAFSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKIWVPFCKKYNIEPRAPEWYFSKKIDYLKDKVQPSFAKDRRAMKREYEEFKIRINVLVAKAQKIPDEGWIMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDSEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPVKSKHKKRGLFSFGGKKSSKSSRKGSDGKKSSKHADPTVPIFNLEDIEEGVEGSGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSAIAESLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLAAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYINTTIYPLTSIPLLAYCTLPAICLLTGQFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINLVGVVAGVSYAVNSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVQQCGINC | 1863 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3449381 | 3461061 | - | Bpe015222.1 | Bpe04g00544 | 102353 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00544 | 1863 | SUPERFAMILY | RING/U-box | 826 | 897 | - | - | |
Bpe04g00544 | 1863 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 826 | 1863 | - | - | |
Bpe04g00544 | 1863 | MobiDBLite | consensus disorder prediction | 1434 | 1469 | - | - | |
Bpe04g00544 | 1863 | MobiDBLite | consensus disorder prediction | 1452 | 1466 | - | - | |
Bpe04g00544 | 1863 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 817 | 905 | IPR013083 | - | |
Bpe04g00544 | 1863 | Pfam | Cellulose synthase | 1139 | 1857 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Bpe04g00544 | 1863 | CDD | mRING-HC-C4C4_CesA_plant | 829 | 879 | - | - | |
Bpe04g00544 | 1863 | ProSiteProfiles | Zinc finger RING-type profile. | 831 | 877 | IPR001841 | - | |
Bpe04g00544 | 1863 | Pfam | Zinc-binding RING-finger | 828 | 897 | IPR027934 | - | |
Bpe04g00544 | 1863 | SUPERFAMILY | (Trans)glycosidases | 227 | 557 | IPR017853 | - | |
Bpe04g00544 | 1863 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 1259 | 1430 | IPR029044 | - | |
Bpe04g00544 | 1863 | PANTHER | CELLULOSE SYNTHASE | 826 | 1863 | - | - | |
Bpe04g00544 | 1863 | MobiDBLite | consensus disorder prediction | 1002 | 1024 | - | - | |
Bpe04g00544 | 1863 | Pfam | Raffinose synthase or seed imbibition protein Sip1 | 187 | 790 | IPR008811 | - | |
Bpe04g00544 | 1863 | Pfam | Raffinose synthase or seed imbibition protein Sip1 | 7 | 177 | IPR008811 | - | |
Bpe04g00544 | 1863 | Gene3D | Aldolase class I | 229 | 540 | IPR013785 | - | |
Bpe04g00544 | 1863 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 1153 | 1658 | IPR029044 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00544 | Bpe-Chr4:3449381 | Bpe10g00547 | Bpe-Chr10:12530451 | 0 | dispersed | |
Bpe08g00588 | Bpe-Chr8:4193890 | Bpe04g00544 | Bpe-Chr4:3449381 | 0 | dispersed | |
Bpe15g00647 | Bpe-Chr15:17249474 | Bpe04g00544 | Bpe-Chr4:3449381 | 1.71E-161 | dispersed | |
Bpe15g00770 | Bpe-Chr15:18035865 | Bpe04g00544 | Bpe-Chr4:3449381 | 6.10E-159 | dispersed | |
Bpe04g00544 | Bpe-Chr4:3449381 | Bpe02g00568 | Bpe-Chr2:3665264 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00544 | K10999 | - | csv:101211779 | 1911.35 |