Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe04g00552 | ATGGCTGACCCCTACTCAAATTTCTTTACAGGTCTCTTCAAGCTCAACACGATCCACCATAACCAACCTTCTCCAAACCCTCCGCCGCACCCTGTTTTCTCCCACAACTTTTTACACCAGAGTCACCCTTTCCACCACCAAACCCCCCCGCCTTCTCCGCCTCTCCGGCAAGCCCTTCCCCTCCTCAGCCTCACGCCACTCAACCAGCAACAACAAGAAGATCCATCTCACCATTCCTGCTTCACCGCCATGGAAGTGGATCAGAAAAGCTTAAAACAGAAAGAAGAAGAAGAGGAAGAAGACGATGACGTGGCTTCTGTAACTGTTGCCCTCCATATAGGGATACCTAGCCCTAGTTCAGCTGAACTTGCTTCTGTTCTCTTTGCTTCTTCATCAGAAACCACTGATCTTAAAGATCATGGAGATGTAGATGATTTAGGGTACCATATGAACAGATTAAACAAGGGTCAGTATTGGATCCCCACTCCATCTCAGATCCTCATTGGTCCAACACAGTTTTCTTGCCCTGTTTGTTGTAAAACCTTCAACAGATACAATAACATGCAGATGCATATGTGGGGCCATGGATCTCAGTATAGACGAGGACCAGAATCACTGAGAGGAACTCAACCAACGGGGATGCTAAGGCTTCCTTGCTACTGCTGCGCAACTGGTTGCAGAAACAACATAGACCATCCAAGGGCTAAGCCCCTTAAAGATTTTAGAACTCTCCAAACGCATTACAAAAGAAAGCATGGAATCAAGCCTTTCATGTGTAGAAAATGTGGGAAAGCCTTTGCAGTGAAAGGAGATTGGAGAACTCATGAGAAAAACTGTGGAAAGCTTTGGTATTGCATTTGTGGGTCTGATTTCAAGCACAAGAGGTCGCTTAAAGATCATATAAAAGCTTTTGGCAAGGAGCACGGAGCTTATGGAGTTGATGGGTTTGAAGAAGATGATGAACCTGCGTCTGAGGTTGAACAAGATAATGATGAA | 996 | 45.58 | MADPYSNFFTGLFKLNTIHHNQPSPNPPPHPVFSHNFLHQSHPFHHQTPPPSPPLRQALPLLSLTPLNQQQQEDPSHHSCFTAMEVDQKSLKQKEEEEEEDDDVASVTVALHIGIPSPSSAELASVLFASSSETTDLKDHGDVDDLGYHMNRLNKGQYWIPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCATGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVKGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGKEHGAYGVDGFEEDDEPASEVEQDNDE | 332 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3498947 | 3500915 | + | Bpe025637 | Bpe04g00552 | 102361 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe04g00552 | 332 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 173 | 200 | IPR013087 | - | |
Bpe04g00552 | 332 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 175 | 195 | IPR013087 | - | |
Bpe04g00552 | 332 | MobiDBLite | consensus disorder prediction | 19 | 57 | - | - | |
Bpe04g00552 | 332 | SUPERFAMILY | beta-beta-alpha zinc fingers | 242 | 277 | IPR036236 | - | |
Bpe04g00552 | 332 | SMART | c2h2final6 | 173 | 195 | IPR013087 | - | |
Bpe04g00552 | 332 | SMART | c2h2final6 | 257 | 277 | IPR013087 | - | |
Bpe04g00552 | 332 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 257 | 277 | IPR013087 | - | |
Bpe04g00552 | 332 | PANTHER | ZINC FINGER PROTEIN WIP2 | 1 | 331 | IPR043584 | GO:0003700|GO:0010468 | |
Bpe04g00552 | 332 | SUPERFAMILY | beta-beta-alpha zinc fingers | 169 | 195 | IPR036236 | - | |
Bpe04g00552 | 332 | MobiDBLite | consensus disorder prediction | 311 | 332 | - | - | |
Bpe04g00552 | 332 | Gene3D | Classic Zinc Finger | 172 | 195 | - | - | |
Bpe04g00552 | 332 | PANTHER | TESTA 1 PROTEIN, PUTATIVE-RELATED | 1 | 331 | - | - | |
Bpe04g00552 | 332 | Gene3D | Classic Zinc Finger | 235 | 311 | - | - | |
Bpe04g00552 | 332 | MobiDBLite | consensus disorder prediction | 316 | 332 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00552 | Bpe-Chr4:3498947 | Bpe06g00633 | Bpe-Chr6:17106550 | 8.38E-128 | dispersed | |
Bpe02g00007 | Bpe-Chr2:71469 | Bpe04g00552 | Bpe-Chr4:3498947 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21236 | None | None | None | None | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe04g00552 | - | - | jre:108986074 | 514.227 |