Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00667 ATGAGTTCGTCCTCTGGTACTTGTGAGATTGTTGAAGCTAAGGAAGAGTCAGAGTTTGTACGACATATGAGATCTTCTCGATCAAATTACAAGATGAGTGACAAAGATCAAACACTCCTTGCTATGAAAGTGGGGTATAAAGATTTTCTAAAGAATGACATCAATAAACTTTTTGAGGCGATGGATCTCAAACAATCTAAGAGTTTGGATCTTTCACACTTAGGCAAAGGTTCAATGAGAAATAATTTCCCAGTCACAACAAGTGTGACTCGTTCACCTGGAACAGAGATAACTGAAACAGTGAATCTGAAGCAAGCGTTAAGGGAGTTCTCCCTGACGAAGGCATCCGAAATGGCTGCTATGAAACGGCTATCAAAGTTAGCTAGCACTTCCAGAGCCTCAGAAGCTGGACGAATTACAACACTGTATAATTCAGTTGTCATTGAAGCTAGTTATTCTAGCCCATCCTTCAATGATGTGAAGAGAAATGTAGTCCAAAAATCAATGGAAATAGAGGAAGGCACATCAAAATCCAAGAAGATTTCGGACAATGTTGATGTACCTTCGGTTCAATCAGCTAGCAAAAGTCTGCATTCTTCTCCTCGATTAGCTGGTATGGCGACACAGCACAGTCCTGAGATGACTCGAGAACGAAATGAGAATGGGTCTTTGACAAGGAAAGTTGGGACTATTACACAACAAGAGAAACGTTCATCCTCTCTGTCTTGTTCGACCTCTACTGTTTACATTGGAGAAGAGGATGAAAGCATTCATTCTGCAAGTAAAGTAGTGAGGAAAATGTCAATATCAAAGCCACTTCGGAAAGGCAGGTTGCAAACGGCAACATCATCTCATCTGGTAAAAGGAAACAGGGTAGGAAAATTATCTAGAAATACAACCAGGCCGATCAAGCCAGTTATTAGGAGCAAGGGAATTTCAAAGAAAACAATGAAAGAGGATACAAGTGCCGCTACTTGCACTTCTAGTAATTATAACGAAGTAAATGGTGATGCAGATCCTAGTTCACGACAGTTGATATGTGAGCGGTGCCAATGTACTATGAACAATGCAGGTAAGGAATTAAAAGATTCTTTGGCTTCTCTGTCTAACCATGTTGCCACTGAAGTAATTTCAAATAATGGAAAATCCGGTGTTTGCAATACTGTCACCACATATGATGGCTATAATAGCAGCAAAGCTGCAATAGTGAAAGTGAAAAAGATCATGAGAGTAACAGATAAGGGTGAATTTTCGCAAAGCTCAAAAAGTAGCCAAGGTGAGTACAGTAGCAGTACTGCTAGTATCAGTGACGAGAGCAATGTAAGTGGGTCCAGTTGTGGTAACAGACCCCACATGGCGAAGGATGCTAGGTGGGAAGCCATACGTCAAGTAAGAACAGAGCAGGGAGTCCTCAGCTTAACACACTTCAATCTTTTAAAGAAGCTTGGTTGTGGAGATATTGGAACTGTGTATCTTGCTGAGCTGATTGGTGCTAATTGTTTATTTGCCATAAAAGTTATGGACAATGAATTTTTAGCTAGAAGAAAGAAAATGCCAAGGGCTCAAACTGAAAGAGAAATTCTTAGAATGTTGGATCATCCTTTTCTTCCCACACTTTATGCCCAGTTTACATCAGATAATTTATCCTGTCTGGTAATGGAGTATTGTCCAGGAGGAGATCTTCATGTACTTCGACAGAAACAGCCTGGCAGGATTTTTCCTGAAACAGCTGCCAGGTTCTACGTTGCCGAAGTCCTGCTTGCTCTAGAGTATCTGCACATGCTCGGAGTTGTTTATCGAGATTTGAAACCAGAAAACATTCTCGTCCGAGAAGATGGCCATATTATGCTTACGGATTTCGATCTTTCACTCAGGTGCACTGTCAATCCAACTCTTCTAAAATCATCTTCCTTCAATGGGGATCCTGCAAGAGTCTCTGGTCCATGTACAGAATCTAGTTGTGTGGAGCCCTTCTGCATTGAACCGCCCTGTCAAGTTCCATGCTTCAGTCCCAGGTTTCTACCTGCATCTGCCAAAGCAAGAAAGTTAAAATCCGAGCTTGCAAACCAGGTAAGATCATTACCTCAACTTATCGCCGAACCGACTGAGGCTCGATCTAATTCCTTTGTTGGAACCCACGAATACTTGGCTCCTGAGATCATTAAGGGAGACGGACATGGGGCTGCTGTTGATTGGTGGACTTTTGGGATCTTTCTTTACGAGCTTCTCTATGGTAGAACGCCTTTCAAAGGTTGCAACAATGAAGAAACCTTAGCCAATGTTGTGTTACAGAGCCTCAAATTTCCTGACAGCCACTTCGTGAGTTTTCAGGCAAGGGAACTCATTCGAGGGTTGTTGGTTAAGGAACCGGAAAATCGATTTGGAACAGAAAAAGGGGCTGCTGAAATAAAGAAACATCCCTTCTTTGAGGGCTTAAATTGGGCTTTGATTCGGTGCACTATTCCACCCGAACTTCCTGAGTTTTGCGAGTTTGACATTCCGAACATGGTTTCTCAACAGAACAAGGGTAAGCTGTTGGAATGCAAAGCCACCGGAGAACATCTGGAGTTTGAGTTGTTTTAG 2583 42.12 MSSSSGTCEIVEAKEESEFVRHMRSSRSNYKMSDKDQTLLAMKVGYKDFLKNDINKLFEAMDLKQSKSLDLSHLGKGSMRNNFPVTTSVTRSPGTEITETVNLKQALREFSLTKASEMAAMKRLSKLASTSRASEAGRITTLYNSVVIEASYSSPSFNDVKRNVVQKSMEIEEGTSKSKKISDNVDVPSVQSASKSLHSSPRLAGMATQHSPEMTRERNENGSLTRKVGTITQQEKRSSSLSCSTSTVYIGEEDESIHSASKVVRKMSISKPLRKGRLQTATSSHLVKGNRVGKLSRNTTRPIKPVIRSKGISKKTMKEDTSAATCTSSNYNEVNGDADPSSRQLICERCQCTMNNAGKELKDSLASLSNHVATEVISNNGKSGVCNTVTTYDGYNSSKAAIVKVKKIMRVTDKGEFSQSSKSSQGEYSSSTASISDESNVSGSSCGNRPHMAKDARWEAIRQVRTEQGVLSLTHFNLLKKLGCGDIGTVYLAELIGANCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQPGRIFPETAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCTVNPTLLKSSSFNGDPARVSGPCTESSCVEPFCIEPPCQVPCFSPRFLPASAKARKLKSELANQVRSLPQLIAEPTEARSNSFVGTHEYLAPEIIKGDGHGAAVDWWTFGIFLYELLYGRTPFKGCNNEETLANVVLQSLKFPDSHFVSFQARELIRGLLVKEPENRFGTEKGAAEIKKHPFFEGLNWALIRCTIPPELPEFCEFDIPNMVSQQNKGKLLECKATGEHLEFELF 860
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4224400 4228046 - Bpe015332.1 Bpe04g00667 102476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00667 860 CDD STKc_phototropin_like 474 827 - -
Bpe04g00667 860 MobiDBLite consensus disorder prediction 224 238 - -
Bpe04g00667 860 MobiDBLite consensus disorder prediction 416 450 - -
Bpe04g00667 860 Gene3D Phosphorylase Kinase; domain 1 475 559 - -
Bpe04g00667 860 ProSiteProfiles Protein kinase domain profile. 476 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00667 860 Pfam Protein kinase domain 477 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00667 860 Pfam Protein kinase domain 706 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00667 860 MobiDBLite consensus disorder prediction 171 238 - -
Bpe04g00667 860 Gene3D Transferase(Phosphotransferase) domain 1 560 641 - -
Bpe04g00667 860 Gene3D Transferase(Phosphotransferase) domain 1 703 824 - -
Bpe04g00667 860 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Bpe04g00667 860 SMART serkin_6 476 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe04g00667 860 PANTHER FLIPPASE KINASE 1-RELATED 1 860 - -
Bpe04g00667 860 SUPERFAMILY Protein kinase-like (PK-like) 458 826 IPR011009 -
Bpe04g00667 860 MobiDBLite consensus disorder prediction 181 206 - -
Bpe04g00667 860 MobiDBLite consensus disorder prediction 416 447 - -
Bpe04g00667 860 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 860 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00667 Bpe-Chr4:4224400 Bpe08g00199 Bpe-Chr8:1117847 0 dispersed
Bpe14g00766 Bpe-Chr14:5852678 Bpe04g00667 Bpe-Chr4:4224400 6.17E-112 dispersed
Bpe14g01168 Bpe-Chr14:8722025 Bpe04g00667 Bpe-Chr4:4224400 0 dispersed
Bpe03g00862 Bpe-Chr3:28409099 Bpe04g00667 Bpe-Chr4:4224400 1.07E-107 transposed
Bpe01g00237 Bpe-Chr1:1443292 Bpe04g00667 Bpe-Chr4:4224400 0 wgd
Bpe02g00756 Bpe-Chr2:5321299 Bpe04g00667 Bpe-Chr4:4224400 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63296 PF00069 Pkinase 5.90E-36 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00667 - K08286 mcha:111013600 1090.49