Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00677 ATGCCTTTCCGTAATTTTGCTATTGGCCGGCCGCAAGAGGCCCTCGAACCGGAGCTATGGAAGTGCGGTGTGGCAGAGTTTATCTCGACGCTGATATTCGTTTTCGCCGGTCAAGGGTCGGGAATGGCGTTTGCCAAGTTGACGAGCAACGGCTCTACAACCGAGGCCGCGATAATCGCAGCCTCTCTTGCCCATGGTTTCGGCCTCTTCATCGGCGTCGCTGTCAGCTTTAACATTTCCGGCGGCCACGTCAACCCAGCTGTTACCTTCGGTGCATTCGTTGGTGGAAATGTTACTCTCATCCGCCTCGTTGTTTACTGGATTGGTCAGCTTCTCGGCTCTGTTGCTGCCTGCGGTCTTCTCAAATTCACCACCCACGGCATGACTACAACGGCATTTACGTTCTCCTCAGATATTACAGTGTGGAACGCCTTCGTTTTCGAGATCGTTATGACATTCGGTCTTGTCTACACAGTCTATGCCACAGCCATTGATCCCAACAAAGGAACTCTAAAGACAATTGCTCCGATCGCAATCGGTCTAATTGTCGGCGCCAATGTTTTGGCCGGTGGTGCCTTCGAGGGAGCGTCGATGAACCCCGCCGTCTCATTTGGACCGGCGTTGGTGAGCTGGAGCTGGGACCATCAATGGGTTTACTGGGCTGGACCACTCATTGGCGGCGGTATCGCCGGCCTTGTTTTCGAAGGTTTATTCATCAGGCAAAACCACGAGCAACTCCGTCCTACTGATTTCTGA 756 53.31 MPFRNFAIGRPQEALEPELWKCGVAEFISTLIFVFAGQGSGMAFAKLTSNGSTTEAAIIAASLAHGFGLFIGVAVSFNISGGHVNPAVTFGAFVGGNVTLIRLVVYWIGQLLGSVAACGLLKFTTHGMTTTAFTFSSDITVWNAFVFEIVMTFGLVYTVYATAIDPNKGTLKTIAPIAIGLIVGANVLAGGAFEGASMNPAVSFGPALVSWSWDHQWVYWAGPLIGGGIAGLVFEGLFIRQNHEQLRPTDF 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4293103 4294151 - Bpe015339.1 Bpe04g00677 102486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00677 251 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
Bpe04g00677 251 PANTHER AQUAPORIN-8 1 250 IPR034294 -
Bpe04g00677 251 SUPERFAMILY Aquaporin-like 13 245 IPR023271 -
Bpe04g00677 251 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00677 251 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00677 251 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00677 251 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00677 251 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00677 251 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00677 251 Pfam Major intrinsic protein 17 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00677 251 PANTHER AQUAPORIN TIP1-1 1 250 - -
Bpe04g00677 251 CDD MIP 24 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00677 251 ProSitePatterns MIP family signature. 83 91 IPR022357 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g01275 Bpe04g00677 CCT
Bpe02g00774 Bpe04g00677 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00677 Bpe-Chr4:4293103 Bpe11g00779 Bpe-Chr11:5813498 1.06E-121 dispersed
Bpe02g00774 Bpe-Chr2:5541767 Bpe04g00677 Bpe-Chr4:4293103 3.88E-165 wgd
Bpe03g01275 Bpe-Chr3:31280109 Bpe04g00677 Bpe-Chr4:4293103 1.72E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00677 K09873 - jre:108996816 387.111