Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00695 GGATTTAAGAATGGATCATCGGAGAACGGCTCATTGGGGAGCCTGTGCAAGAGCCGCGATCCGTTGAACTGGGGAGCTGCAGCGGAGGCGCTCAAAGGGAGCCATTTGGACGAGGTGAAGCGGATGGTGGCGGAGTATCGCCGGCCGGTGATCAACCTCGGAGGGGAGAGTTTGACCATTGCGCAGGTCGCTGCTGTTGCTGGACGGGACTCGGAAGTTTCCGTCGAGCTGTCGGAATCGGCCAGGGCCGGCGTGAAGGCAAGCAGTGACTGGGTGATGGATAGTATGAACAAAGGGACGGATAGCTATGGAGTTACTACTGGGTTTGGTGCAACTTCACACAGAAGAACTAAAGAAGGTGGAGCTCTACAGAAGGAGCTGATCAGATTCTTGAACGCCGGAATCTTCGGAAACGGAACGGAGTCTTGCCACACATTGCCGCACTCCGCCAGCAGAGCCGCGATGCTTGTAAGAATCAACACCCTCCTCCAGGGCTACTCCGGAATCAGGTTCGACATTCTGGAAGCCATAACCAAACTTCTCAACAGCAACGTCACTCCGTGTTTGCCTCTTCGTGGTACAATCACAGCCTCCGGTGACCTCGTACCCCTATCATACATCGCCGGGCTACTCACCGGAAGACCCAACTCTAAAGCCGTTGGCCCTAACGGAGAGTCGCTCACTGCTACGGAGGCGTTCGAGCGTGCCGGTATTAAATCAGGGTTTTTCGAGCTGCAGCCGAAGGAAGGGCTGGCACTGGTCAACGGCACCGCGGTGGGATCTGGGTTGGCCTCGGTGGTGCTCTTTGAGGCTAATATTCTCGCTGTGCTGTCGGAGATCCTTTCTGCCATTTTCGCCGAGGTGATGCAGGGGAAGCCGGAGTTTACAGATCATTTGACCCATAAATTGAAGCATCATCCTGGTCAAATTGAAGCCGCCGCCATAATGGAGCACATCTTGGACGGAAGCTCGTACATCAAAGCCGCAAAAAAGCTTCATGAAATGGATCCTCTGCAGAAACCGAAACAGGATCGCTACGCTCTTCGAACTTCGCCTCAATGGCTCGGCCCTCTAATTGAAGTGATCCGATTCTCAACAAAGTCGATTGAAAGAGAAATCAACTCGGTCAACGATAACCCTCTGATCGATGTTTCTCGCAACAAGGCATTACACGGCGGGAACTTCCAAGGAACTCCAATTGGAGTATCCATGGATAATACCCGTTTAGCCATTGCTTCAATCGGGAAGCTGATTTTCGCCCAGTTTTCTGAACTGGTCAATGATTTCTACAACAATGGATTACCCTCGAATCTCTCTGCCGGCAGAAACCCCAGCTTGGATTACGGGTTCAAAGGAGCTGAAATCGCAATGGCTTCATATTGCTCCGAGCTTCAGTACCTCGCAAATCCAGTAACGACCCATGTCCAAAGTGCAGAGCAGCACAATCAAGACGTCAACTCTCTCGGCCTAATTTCATCCAGAAAAACAGCTGAAGCTATCGATATTTTGAAATTGATGTCCTCCACCTTCCTGATCGCGCTCTGCCAAGCAATCGATTTGAGGCATTTGGAGGAGAACTTAAAGAGCACAGTGAAGAACACAATCAGCCTAGTTGCAAAGAAGGTTCTAACCACTAGCGCCAATGGACAGCTCCACCCATCAAGATTCTGTGAGAAGGACTTACTCAGAGTCGTCGACAGAGAATACGTTTTCGCCTACATTGACGATCCCTGCAGTGCAAATTACCCATTAATGCAGAAGCTCAGACAAGTCCTCGTCGAGCACGCGCTCACCAACGGAGAAAGCGAGAAGAACGCAAGCACTTCGATCTTCCAAAAGATCGCCGCGTTTGAAGAGGAGTTGCTTGCGATCTTGCCGAAAGAAGTGGAAGCGACAAGGGTGGCAATCGAAAACGGAGGCGCTGCCATCGGAAACCAGATAAAGAACTGCAGATCGTACCCACTGTACAAGTTCGTGAGGGAAGAACTGGGAACAGGGCTGCTGACAGGGGAGAAAGTGAAGTCCCCCGGCGAAGAATGCGATGTCGTGTTCACGGCGATGTGCGAGGGAAAACTGATCGACCCTATTCTGGCCTGCCTGAGCGACTGGAATGGCGCGCCAATCCCTATCTGC 2133 51.95 GFKNGSSENGSLGSLCKSRDPLNWGAAAEALKGSHLDEVKRMVAEYRRPVINLGGESLTIAQVAAVAGRDSEVSVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGIFGNGTESCHTLPHSASRAAMLVRINTLLQGYSGIRFDILEAITKLLNSNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGESLTATEAFERAGIKSGFFELQPKEGLALVNGTAVGSGLASVVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLIFAQFSELVNDFYNNGLPSNLSAGRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLIALCQAIDLRHLEENLKSTVKNTISLVAKKVLTTSANGQLHPSRFCEKDLLRVVDREYVFAYIDDPCSANYPLMQKLRQVLVEHALTNGESEKNASTSIFQKIAAFEEELLAILPKEVEATRVAIENGGAAIGNQIKNCRSYPLYKFVREELGTGLLTGEKVKSPGEECDVVFTAMCEGKLIDPILACLSDWNGAPIPIC 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4449075 4451427 + Bpe025659 Bpe04g00695 102504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00695 711 Gene3D - 13 257 IPR024083 -
Bpe04g00695 711 Gene3D Fumarase/aspartase (Central domain) 258 706 - -
Bpe04g00695 711 SUPERFAMILY L-aspartase-like 20 711 IPR008948 GO:0003824
Bpe04g00695 711 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 20 700 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bpe04g00695 711 PANTHER HISTIDINE AMMONIA-LYASE 16 711 IPR001106 -
Bpe04g00695 711 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 16 711 - -
Bpe04g00695 711 CDD PAL-HAL 56 521 IPR001106 -
Bpe04g00695 711 Pfam Aromatic amino acid lyase 58 532 IPR001106 -
Bpe04g00695 711 Gene3D - 524 645 IPR023144 -
Bpe04g00695 711 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 193 209 IPR022313 GO:0016841
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00788 Bpe04g00695 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00695 Bpe-Chr4:4449075 Bpe04g00697 Bpe-Chr4:4465678 0 proximal
Bpe15g01056 Bpe-Chr15:19846154 Bpe04g00695 Bpe-Chr4:4449075 0 wgd
Bpe02g00788 Bpe-Chr2:5696165 Bpe04g00695 Bpe-Chr4:4449075 0 wgd
Bpe04g00695 Bpe-Chr4:4449075 Bpe04g01887 Bpe-Chr4:23918844 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00695 K10775 - rcu:8284514 1241.87