Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00696 ATGGCTGAAGCTCCGGCGAGCCCCGGTGGAGGGAGCTTCGAAAGCGGCGAACACAGCCCCCGTAATGTTCGCGAGCAGGACAGGTACCTTCCTATTGCGAATATTAGCCGAATCATGAAGAAGGCTCTCCCTGCTAATGGAAAGATCGCCAAGGATGCTAAGGAAACCGTCCAGGAATGTGTCTCGGAATTCATTAGCTTCATCACGAGCGAGGCGAGTGACAAGTGCCAAAGAGAGAAGAGAAAGACGATTAATGGTGACGATTTACTTTGGGCTATGGCAACTTTAGGGTTTGAAGATTATATTGATCCCCTTAAAATTTACCTTGGAAGATACAGAGAGGGTGATACAAAGGGGTCAGGAAAGGGTGGAGAAGGGTCAGCTAAAAAGGATGTTCAAGCAGGTCCCAATACTCAGGTT 420 48.57 MAEAPASPGGGSFESGEHSPRNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLGRYREGDTKGSGKGGEGSAKKDVQAGPNTQV 140
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4455196 4455981 - Bpe025660 Bpe04g00696 102505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00696 140 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 29 93 IPR003958 -
Bpe04g00696 140 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 133 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bpe04g00696 140 MobiDBLite consensus disorder prediction 1 25 - -
Bpe04g00696 140 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED 1 133 - -
Bpe04g00696 140 ProSitePatterns NF-YB/HAP3 subunit signature. 60 76 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bpe04g00696 140 Gene3D Histone, subunit A 17 139 IPR009072 GO:0046982
Bpe04g00696 140 MobiDBLite consensus disorder prediction 116 140 - -
Bpe04g00696 140 PRINTS CCAAT-binding transcription factor subunit A signature 95 113 - -
Bpe04g00696 140 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Bpe04g00696 140 PRINTS CCAAT-binding transcription factor subunit A signature 76 94 - -
Bpe04g00696 140 SUPERFAMILY Histone-fold 26 123 IPR009072 GO:0046982
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00696 Bpe-Chr4:4455196 Bpe04g01866 Bpe-Chr4:23814893 2.25E-79 dispersed
Bpe04g00696 Bpe-Chr4:4455196 Bpe04g00707 Bpe-Chr4:4554977 2.89E-84 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21258 PF00808 CBFD_NFYB_HMF 7.00E-28 CL0012 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00696 K08065 - zju:107432901 241.121