Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00697 TCTGTAATGGAGACCGTTAAGCTCGGCGGATTTAAGAATGGATCATCGGAGAACAGCTCATTGGGAAGCCAGTGCAAGAGCCGTGATCCGTTGAACTGGGGAGCTGCCGCGGAGGCGCTCAAAGGGAGCCATTTGGACGAGGTGAAGCGGATGGTGGCGGAGTATCGCCGGCCGGTGATCAACCTCGGAGGGGAGAGTTTGACCATTGGGCAGGTCGCTGCTGTCGCTGAACGGGACTCGGAAGTTTCCGTCGAGCTGTCGGAATCGGCCAGGGCCGGCGTGAAGGCAAGCAGTGACTGGGTGATGGATAGTATGAACAAAGGGACGGATAGCTATGGAGTTCCTACTGGGTTTGGTGCAACTTCACACAGAAGAACTAAAGAGGGTGGAGCTCTACAGAAGGAGCTGATCAGATTCTTGAACGCCGGAATCTTCGGAAACGGAACGGAGTCTTGCCACACATTGCCGCACTCCGCCAGCAGAGCCGCGATGCTTGTAAGAATCAACACCCTCCTCCAGGGCTACTCCGGAATCAGGTTCGACATTCTGGAAGCCATAACCAAACTTCTCAACAGCAACGTTACTCCGTGTTTGCCTCTTCGTGGTACAATCACTGCCTCCGGTGACCTCGTACCCCTATCCTACATCGCCGGGCTACTCACCGGAAGACACAACTCCAAAGCCGTTGGCCCTAACGGAGAGTCGCTCACTGCTACGGAGGCGTTCGAGCGTGCCGGTATTAAATCCGGGTTTTTCGAGCTGCAGCCGAAGGAAGGGCTGGCACTGGTCAACGGCACCGCGGTGGGATCTGGGTTGGCCTCGGTGGTGCTCTTTGAGGCTAATATTCTCGCTGTGCTGTCGGAGATCCTTTCTGCCATTTTCGCCGAGGTGATGCAGGGGAAGCCGGAGTTTACAGATCATTTGACCCATAAATTGAAGCATCATCCTGGTCAAATTGAAGCCGCCGCCATAATGGAGCACATCTTGGACGGAAGCTCGTACATCAAAGCCGCAAAAAAGCTTCATGAAATGGATCCTCTGCAGAAACCGAAAACGGAACGCTACGCTCTTCGAACTTCGCCTCAATGGCTAGGCCCTCTAATTGAAGTGATCCGATTCTCAACAAAGTCGATTGAAAGAGAAATCAACTCGGTCAACGATAACCCTCTGATCGATGTTTCTCGCAACAAGGCATTACACGGCGGAAACTTCCAAGGAACTCCAATTGGAGTATCCATGGATAATACCCGTTTAGCCATTGCTTCAATCGGGAAGCTGATTTTCGCCCAGTTTTCTGAACTGGTCAATGATTTCTACAACAATGGATTACCCTCGAATCTCTCTGCCGGCAGAAACCCCAGCTTGGATTACGGGTTCAAAGGAGCTGAAATCGCAATGGCTTCATATTGCTCCGAGCTTCAGTACCTCGCAAATCCAGTAACGACCCATGTCCAAAGTGCAGAGCAGCACAATCAAGACGTCAACTCTCTCGGCCTAATTTCATCCAGAAAAACAGCTGAAGCTATCGATATTTTGAAATTGATGTCCTCCACCTTCCTGATCGCTCTCTGCCAAGCGATCGATTTGAGGCATTTGGAGGAGAACTTGAAGAGCACAGTTAAGAACACAATCAGCCTAGTTGCAAAGAAGGATCTAACCACTAGCGCCAATGGACAGCTCCACCCATCAAGATTCTGCGAGGACTTACTCAAAGTCGTCGACAGAGAGTACGTTTTCCCCTACATTGAGGATCCCTGCAGTGCAAATTACCCATTAATGCAGAAGCTCAGACAAGTCCTCGTCGAGCACGCGCTCACCAACGGAGAAAGCGAGAAGAACGCAAGCACTTCGATCTTCCAAAAGATCGCCGCGTTTGAAGAAGAGTTGCTGGCGATCTTGCCGAAAGAAGTGGAAGCGACAAGGGTGGCAATCGAAAACGGAGGCGCTGCCATCGGAAACCAGATAAAGAACTGCAGATCGTACCCGCTGTACAAGTTCGTGAGGGAAGAGCTGGGAACAGGGCTGCTGACAGGAGAGAAAGTGAAATCCCCCGGCGAAGAATGCGATGTCGTGTTCACGGCGATGTGCGAGGGAAAACTGATCGACCCTATTCTGGCCTGCTTGAGCGACTGGAATGGCGCGCCAATCCCTATCTGCTAG 2160 51.9 SVMETVKLGGFKNGSSENSSLGSQCKSRDPLNWGAAAEALKGSHLDEVKRMVAEYRRPVINLGGESLTIGQVAAVAERDSEVSVELSESARAGVKASSDWVMDSMNKGTDSYGVPTGFGATSHRRTKEGGALQKELIRFLNAGIFGNGTESCHTLPHSASRAAMLVRINTLLQGYSGIRFDILEAITKLLNSNVTPCLPLRGTITASGDLVPLSYIAGLLTGRHNSKAVGPNGESLTATEAFERAGIKSGFFELQPKEGLALVNGTAVGSGLASVVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAKKLHEMDPLQKPKTERYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLIFAQFSELVNDFYNNGLPSNLSAGRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLIALCQAIDLRHLEENLKSTVKNTISLVAKKDLTTSANGQLHPSRFCEDLLKVVDREYVFPYIEDPCSANYPLMQKLRQVLVEHALTNGESEKNASTSIFQKIAAFEEELLAILPKEVEATRVAIENGGAAIGNQIKNCRSYPLYKFVREELGTGLLTGEKVKSPGEECDVVFTAMCEGKLIDPILACLSDWNGAPIPIC 719
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4465678 4468057 + Bpe015360.4 Bpe04g00697 102506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00697 719 PANTHER HISTIDINE AMMONIA-LYASE 23 719 IPR001106 -
Bpe04g00697 719 Gene3D Fumarase/aspartase (Central domain) 267 714 - -
Bpe04g00697 719 CDD PAL-HAL 65 530 IPR001106 -
Bpe04g00697 719 Pfam Aromatic amino acid lyase 67 541 IPR001106 -
Bpe04g00697 719 SUPERFAMILY L-aspartase-like 29 719 IPR008948 GO:0003824
Bpe04g00697 719 MobiDBLite consensus disorder prediction 11 27 - -
Bpe04g00697 719 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 202 218 IPR022313 GO:0016841
Bpe04g00697 719 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 29 708 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bpe04g00697 719 Gene3D - 533 653 IPR023144 -
Bpe04g00697 719 Gene3D - 21 266 IPR024083 -
Bpe04g00697 719 MobiDBLite consensus disorder prediction 1 27 - -
Bpe04g00697 719 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 23 719 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00788 Bpe-Chr2:5696165 Bpe04g00697 Bpe-Chr4:4465678 0 dispersed
Bpe04g00697 Bpe-Chr4:4465678 Bpe04g01887 Bpe-Chr4:23918844 0 dispersed
Bpe04g00695 Bpe-Chr4:4449075 Bpe04g00697 Bpe-Chr4:4465678 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00697 K10775 - rcu:8284514 1218.76