Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00699 ATGGAATCGAAAGAGAAGACAAAGGAGGACGAAAAATGCTTAGATCCTCAACTATGGCACGCCTGTGCTGGAGGAATGGTTCAAATCCCACCGTTAGACACCAAGGTGTTCTACTTTCCTCAGGGCCATGCAGAGCATGCCAGTGGGCCTGTTGATTTCCGCAGTTCCCCGAAACTTCCACCGTTTATTGCTTGTCGAGTTTCCGCCGTTAAATTCATGGCTGATCTGGAAACTGACGAGGTTTATTCCAAAATCAAATTGGTTCCCCTAAACAGGAGTGAGCTTGATTTTGAGGAAGATAGAATTTGTGGGCTTAATGTGACTGAAGTTCAGGATAAACCTGCATCGTTTGCAAAGACTTTGACTCAATCTGATGCGAATAACGGTGGGGGATTCTCTGTTCCAAGATATTGTGCAGAGACGATATTTCCACGATTGGATTACAATGTGGACCCACCTGTTCAGAACATTTTCGCTAAGGATGTTCATGGGGAGATTTGGAAATTCCGGCACATTTACAGAGGTACGCCTAGAAGACATCTCTTGACGACCGGCTGGAGTACCTTTGTGAATCATAAGAAGCTCGTTGCAGGTGATTCTATCGTTTTTCTAAGAGCGGAAAATGGAGACTTGTGCGTCGGAATTCGAAGAGCAAAGAGGGGAATTGGAGGTGGGCTGGAATTGTCATCTGGGTGGAATCCATTAGGGGAATATGGGGGATATTCCTGCTATTTGAGAGAAGACGAAGGCACACTATTAAAGACGACTAATGGTTTGAGCTCTGATGGGAATGGTAAAGTTAGGCCGGAAAAGGTCGTCGAGGCTGCAGTGCTGGCGGCTAATGGACAGCCATTTGAAGTCATATATTACCCTCGAGCTAGCACGCCTGAATTCTGTGTGAAAGCGTTTTCTGTGAGAGCGGCAATGCTAATCCGATGGGGCTCTGGAATGAGGTTTAAAATGCCCTTTGAAACCGAGGACTCGTCGAGAATAAGCTGGTTCATGGGAACTATTTCTTCTGTTCAAGTTGCTGATCCAATTTGCTGGCCAGAGTCTCCTTGGCGTCTTCTGCAGGTTACTTGGGACGAGCCTGATTTACTACAGAACGTAAAGCGTGTTAGCCCATGGCTTGTGGAGTTGGTATCAAACATGTCAGCAATCAACCTCTCCCCTTTCCCATCTCCGAGGAAAAAGCCGAGATTGCCTCATCACCCCGAATTCCCCTTTGATGCCACCCAATTTCCGATCCCAAAATCTTTTTCCAATAACAGTCACTCTGGGCCAAGTTTCCCCTTCAGTTGTCTACCCGACAAAACTTCCCCTGCTGGCATGCAGGGAGCCAGGCATGCTCTTTACAATCAACCGTTCTTGGACCTCCGCTTCGAAAAACTTCACGCCTCCCAATTCCCCATTGCTTATCCACCATTTGATCACACTTCCGCTCTGCCCACCAGGACAATGATTCAAAAGCCAAGTATGATGAGTAATGAAGTCACAGGCTTGTTGACAGTGGGGTGTCTGAAAAAATCCGATGACTCGAAGCAGCCCCAACTTGTGCTTTTTGGTCAAACAATACTGACGGAACAACAACTGTTGCAGAGCTCTAGCAAAACTGTGGCCCAAGGTATTACCGGAAATAGTCCGTCAGATGGGAATGTAGATAAAGTGGGGAATTTGTCTGATGAGTCTGTCCCCACCCTTCTCAACCTGGAAACGGGTCATTGTAAAGTGTTTATGGAATCTGAAGATGTAGGCCGAACAATCGATCTCTCGCTGCTTGGTTCGTACGACGAACTTTGTAGAAAGTTGGCTGATTTGTTCGGCATAGAAAACTCGAAGACGTTAAACCATGTGCTCTATAGGGACGGTTCTGGTGCAGTCAAACACATTGGCGACGAACCATTCAGGTTTGCATCCAAAACTCCGTCTCGTCCAAAAGTTTCTCATTCGACTCGTTGTTTTTGA 1965 46.67 MESKEKTKEDEKCLDPQLWHACAGGMVQIPPLDTKVFYFPQGHAEHASGPVDFRSSPKLPPFIACRVSAVKFMADLETDEVYSKIKLVPLNRSELDFEEDRICGLNVTEVQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNVDPPVQNIFAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGLELSSGWNPLGEYGGYSCYLREDEGTLLKTTNGLSSDGNGKVRPEKVVEAAVLAANGQPFEVIYYPRASTPEFCVKAFSVRAAMLIRWGSGMRFKMPFETEDSSRISWFMGTISSVQVADPICWPESPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMSAINLSPFPSPRKKPRLPHHPEFPFDATQFPIPKSFSNNSHSGPSFPFSCLPDKTSPAGMQGARHALYNQPFLDLRFEKLHASQFPIAYPPFDHTSALPTRTMIQKPSMMSNEVTGLLTVGCLKKSDDSKQPQLVLFGQTILTEQQLLQSSSKTVAQGITGNSPSDGNVDKVGNLSDESVPTLLNLETGHCKVFMESEDVGRTIDLSLLGSYDELCRKLADLFGIENSKTLNHVLYRDGSGAVKHIGDEPFRFASKTPSRPKVSHSTRCF 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4494819 4497207 + Bpe015362.1 Bpe04g00699 102508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00699 654 Pfam Auxin response factor 275 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bpe04g00699 654 Gene3D - 313 387 - -
Bpe04g00699 654 ProSiteProfiles B3 DNA-binding domain profile. 117 219 IPR003340 GO:0003677
Bpe04g00699 654 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 3 643 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bpe04g00699 654 Pfam B3 DNA binding domain 117 218 IPR003340 GO:0003677
Bpe04g00699 654 SMART B3_2 117 219 IPR003340 GO:0003677
Bpe04g00699 654 Gene3D - 570 651 - -
Bpe04g00699 654 ProSiteProfiles PB1 domain profile. 572 653 IPR000270 GO:0005515
Bpe04g00699 654 CDD B3_DNA 116 217 IPR003340 GO:0003677
Bpe04g00699 654 PANTHER AUXIN RESPONSE FACTOR 3 643 - -
Bpe04g00699 654 Gene3D - 115 219 IPR015300 -
Bpe04g00699 654 SUPERFAMILY DNA-binding pseudobarrel domain 111 220 IPR015300 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00791 Bpe04g00699 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00699 Bpe-Chr4:4494819 Bpe11g01233 Bpe-Chr11:9210760 2.80E-78 dispersed
Bpe02g01609 Bpe-Chr2:18979131 Bpe04g00699 Bpe-Chr4:4494819 1.70E-121 transposed
Bpe15g01331 Bpe-Chr15:21462163 Bpe04g00699 Bpe-Chr4:4494819 6.57E-176 wgd
Bpe02g00791 Bpe-Chr2:5743427 Bpe04g00699 Bpe-Chr4:4494819 0 wgd
Bpe04g00699 Bpe-Chr4:4494819 Bpe04g01672 Bpe-Chr4:22750640 3.26E-180 wgd
Bpe04g00699 Bpe-Chr4:4494819 Bpe08g00146 Bpe-Chr8:773862 2.07E-75 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21259 PF02362 B3 5.60E-20 CL0405 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00699 - - fve:101313821 906.746