Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00701 ATGGCAGGTGGCTTCTCAGGCAAGGACTACCACGATCCCCCACCGGCGCCACTGATAGACGCCGAAGAGCTCACGCGCTGGTCTTTATACAGAGCGGCGATCGCCGAATTCTTCGCCACTCTTTTGTTCCTTTACGTTACTGTAATGACGGTGATAGGATACAGTAGACAGACCGATACAGCTCACGGCGGCGAAGTTTGCGGTGGCGTTGGAGTACTGGGAATTGCCTGGGCCTTCGGCGGAATGATCTTCATCCTCGTTTACTGCACCGCCGGAATCTCTGGCGGCCATATTAATCCCGCGGTCACTTTCGGCCTGTGTCTTGCTCGTAAGGTCTCGTTAGTCCGAGCTATTCTGTATATGGTTGCTCAATGCTTAGGAGCCATTTGTGGTTGTGGGCTCGTGAGGGCGTTTCAGAATTCTTACTATGATAACTACCACGGCGGAGCTAACATGCTCTCCGCCGGTTACAACAAAGGCACTGGATTAGCCGCTGAAATCATCGGAACCTTCGTTCTTGTTTACACAGTTTTCTCCGCAACAGACCCGAAGAGAAATGCCAGAGATTCCCACGTTCCAGTTTTGGCGCCACTGCCGATTGGTTTTGCGGTGTTCATGGTTCATCTAGCGACCATTCCGATAACCGGCACTGGAATCAACCCAGCTCGAAGTTTTGGAGCTGCTGTGATTTACAACAAAGATAAAGCCTGGGATGATCAATGGATGTTCTGGCTAGGGCCATTCGTGGGAGCCGCCATTGCTACATTTTATCACCAGTACATTCTGCGTGCAGGCGCAGTGAAAGCGTTGGGGTCTTTCAGGAGCACCTACTAA 834 51.8 MAGGFSGKDYHDPPPAPLIDAEELTRWSLYRAAIAEFFATLLFLYVTVMTVIGYSRQTDTAHGGEVCGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLCLARKVSLVRAILYMVAQCLGAICGCGLVRAFQNSYYDNYHGGANMLSAGYNKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKDKAWDDQWMFWLGPFVGAAIATFYHQYILRAGAVKALGSFRSTY 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4503306 4504300 + Bpe015364.1 Bpe04g00701 102510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00701 277 Gene3D Glycerol uptake facilitator protein. 16 277 IPR023271 -
Bpe04g00701 277 PANTHER AQUAPORIN PIP2-4-RELATED 5 276 - -
Bpe04g00701 277 ProSitePatterns MIP family signature. 97 105 IPR022357 -
Bpe04g00701 277 Pfam Major intrinsic protein 23 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00701 277 TIGRFAM MIP: MIP family channel proteins 35 257 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00701 277 SUPERFAMILY Aquaporin-like 23 263 IPR023271 -
Bpe04g00701 277 CDD MIP 31 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00701 277 PRINTS Major intrinsic protein family signature 79 103 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00701 277 PRINTS Major intrinsic protein family signature 165 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00701 277 PRINTS Major intrinsic protein family signature 31 50 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00701 277 PRINTS Major intrinsic protein family signature 116 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00701 277 PRINTS Major intrinsic protein family signature 201 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00701 277 PRINTS Major intrinsic protein family signature 241 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe04g00701 277 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 5 276 IPR034294 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00794 Bpe04g00701 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00701 Bpe-Chr4:4503306 Bpe08g00157 Bpe-Chr8:844091 3.37E-165 dispersed
Bpe01g00189 Bpe-Chr1:1132508 Bpe04g00701 Bpe-Chr4:4503306 4.85E-158 wgd
Bpe02g00794 Bpe-Chr2:5774315 Bpe04g00701 Bpe-Chr4:4503306 7.70E-177 wgd
Bpe04g00701 Bpe-Chr4:4503306 Bpe04g01673 Bpe-Chr4:22754171 1.77E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00701 K09872 - jre:109020874 493.812