Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe04g00706 ATGGAGAATCATGACCCAAAGGATGCTGAAATTTTGGATTCGATGCTGAATGATAATCAAGCATGCAGTTCAGTTGAGTTCAAGCCAAGTTCATCAAATTCATCTATACAAACACATATAGCTTCAACAAATTCTCATCTTGAAACCCGTGATCATGATGTGGAAACTTCATCCTCTGCTTCAGCATCTAGTCGGTCAGATATAGATACTGAGAAAGATTCTTATGGGTCATGTGACTCTGATGATGCAGAGCAAAGGCAAAACCATTACAAGAATTATCAGAGTAGAAGTTGGGCTGGTGATCATGGAAGGATGAGGAGGATTGTGATGCAATTGAGTGACGAAACAGACCCTTCAGGGCAATTAGCTTTGCTCACTGAGCTATGTGAGGTTCTGTCATTTTGCACGGAAAATTCACTTTCCAGCACTACATCGGAGTTATCTGCTCAGCTGCTTGTAAAACTTGCAAACTATGATGACAATCCTGACCTTATGTTATTTGCTATAAGGGCTATAACTTATTTATGTGATGTGCATCCTCAGTCCACCGAGTTTCTTGTTCAACATCAAGCCGTTGAAGTTCTTTGCCAAAGGTTAATGGCTATTGAGTACTTGGATGTCGCTGAGCAGTGTCTCCAAGCACTGGATAAAATATCACGGGAACAACCTCTTGTATGCTTACGTGGTGGGGCGACTATGGCTGTTCTAAATTATATTGATTTCTTTTCAACGAGTGCACAAAGAGTTGCTCTTTCCACTGTGGTGAATATATGTAGAAAACTTCCTCCTGAATGTCCTTCATCTTTCATGGAAGCTATTCCCTTATTGTGCAATCTTCTCAAGTATGAGGATGAACAGATTGTTGAAGATGTAGCTGCCTGCATAGTAAAGATTTCTAAGAGAGTTAGCGAGTCCTCTGCTATACTGGAAGAATTTTGTAGACATGGGCTGATTCATCACATCACTCGTCTATTGAACTTGAATAGCCGAAGTACTTTGTCCCCACCAGTATATACTGATTTGATTAGACTTCTTGCAGAACTTTCTTCCCGTTCAATGTTTTCTTTTGCAACTCTTTATGAGCTGAACATAAGCAATGTACTTAAGGATATGCTATCTACTTTTATTCGCTCCCAGGGAATGTATTCTTTGCACGCTGTCGATGGACAGTACAATCAGGCATGTGAACTTCTAAAATTTCTTCATGAGCTTCTCCCGACATTTCTTGAAGATGAAAAGGTTCAACTGGCATCAGACAAAGAATCTTACTTAGTAAATCATCCCGATGTTCTCCAAAATTTTGGAATGGATATATTGCCCTTGATGATTCAGGTGGTCAATTCTGGTGCAAGTATGTCTGTTTGCTATGGATGCCTAATCGTTGTTTACAACCTAGTCTACTTGAGCAAATCTGAAGTGCTTGCTGTACTGCTAAAGGATGCCAAAATTGCTAGTTTCCTAGCTGGGGCGTTCACTCGTAAAGACCATCATGTGCTAATATTATCCCTGAAAATTGCTGACATGCTTCTGCAAAAGCTTCCTGATATTTTTATGAACTCATTTATCAAAGAAGGTGTCTTCTTTGCAATCGAAGTGTTATTATCCTCAGAAAAAGGCTTAGCTCTCAAAGAGGGCATTCCTGCACATGAATCAAGTCATTTTGAAAATACAAGATGCCTGTGTTATACATTTTCTGTTAATCAATCCTCTTCAGTCACAGAAACATTATCTTGTAGGCTCAAAAACAACTCTGTTCGTGATCTTGCGGAGAAAATAAGAAGTATATATTTTGCTTCTGATATATATGATTTGGGTGGAGTGACCGACATTCTCCAAATGCTCCAAACTTCATCTGTCGCACTAGACGAATTATCAAACAATACGTCGAATCAAAATGAAGATAAAGTGCATCATATATTGCTTGAACTTGTATCTGAGCTTAAGGGCCGCGAATTCATATCGACTTTTGAATTTATAGAGAGTGGAATTGTAAAAGCATTGATGAACTTCCTGTCCAATGGTCAGTATATGATGAAAAACCAACGACAGAATGATGTTTATGGTCACTATCTCGTTGTGGAAAAAAGATTTGAGGTATTTGCCAAGTTATTTCTGTCTTATTCTGATCCAACTTCTGGGGAGTTACTGTTATCATTATTGTTAAGGAAATTACAGAATATCCTATCATCTTTGGAAAAATTTCCTGTTGTCCTTAACCAAGGTCAAGGATTTAAACAAAGAAACTGCTTTGCTGCTGTTCCAAATGGACGTCGAATATCATATCCATGTCTACGAGTTCGTTTTGAGAAAGGAGATGGAGAACTATACCTCTGTGACTACTCAGAAGACATTCTGACTGTTGACCCTTTATCTTCTTTGGATGTCATTATACAATTTTTGTGGCCTAAAGTTAGCACAAAACGAACCAAGCACATCAGATCATCTTCGACATCTGAAGCAAGGGACCAAACAGAAAATCAACCTATTAAGTTATCGCCAATGGAAGACGAGAAGAACTTGCCCCGGTCTCCATCTGATGAACCAGTAAGTTTGACTCCTTCAAGTATGAGTGAAAGAACACATTTGGATATTTCTCCAGAGTCAAATAATAGTCTGCAATCTCATCATCCTTCAGCTTGTGGCAATGATGATGCTTCTCCAAGACTGTTACTTTACCTTGATGGGCAGCAGTTAGACAGCTCATTGACTTTTTACCAAGCAATTCTTAAACAAAAAATAAATGAAGATGAAATATTCGATTGTACAAAATTGTTGGATCAGGTATACACATTGACATATAGAAGAGACCTGGATTCAAGAGACATCTGTTCTCCAGCATGCTGTCCTGTGTCTGTACCGGAATCAAATTCAGCATACATGCAATGTGCTTCGGCTTTTTCTAACATCTTCGATTCTGATCTTACTTCTGACTTAGAAAAGCATAGTCCTACTTATGATGTCCTATTTCTGCTTAAAAGCTTGGAAGGGATGAACAGATTAACTTTTCATCTTCTGTCACATCAGAGGATACATGCTTTTGCTGAAGGGAGAAGTGATAGCTTTGATGAGATGGAAATTTCAGTTCCTTCAGTATCACAGAATGAGTTTATAAGCAGTAAATTGACAGAAAAGTTAGAGCAACAAATGGGGGACTCTTTGGCGATGTCGACTGGTGGCATGCCTTCATGGTGTAATCAACTGATGGTTTCATGTCCATTTTTATTCAGTTTCGATGCAAGACGTAAATACTTTCATTTATCAGCATTTGGTCCTCTCCAAGTTCTTAGTCACACACGTTCTAATGGTAGCTCAGGGACCCCCAGCGACAGGCGAATGAGCTCTGGTAGCTTCCCTCGTAAGAAAGTTTTAGTATTTCGCAACCGGGTTTTGGACTCTGCTTCTGAAATGATGGAGAAGCATGTTCAACATAAAGTTCTCCTTGAAGTTGAATTTAATGATGAAGTTGGCAGTGGACTTGGTCCAACACTGGAGTTTTATACTCTTATTTGTCGTGAGTTTCAAAAATCTGGCTTAGGAATGTGGAGAGAGGATCTTAGTCTGTTTAGCCCTCGACAAAGCTTGGTGGCTGAAGATGACGAAATTTTGAGGTTTCCTTTTGGTCTTTTCCCACGGCCATGGTCATCAAATTTAAATGCAACTGTTGGATTGGAGTTCAGCGAGGTAACAAAAAAGTTTGTCCTCTTAGGCCAAGTTGTAGCAAGAAGTATTCAAGATGGACGGGTGTTGGATCTTTGCTTCTCCAAAGCCTTCTATAAACTTATTCTTGGGCAGGAGATCAATCTCTTGGACATCCAGTCATTTGATCCGGAGCTCGGTAGGACATTGCTAGAGTTTCAGGCTCTTGTCGAGAGGAAAAAGTTTTTGGAGTCTTCTTGTGGAGAAAATTTATCTAATTTGGACCTAAGTTATCGAAATACCAAGATAGAGGATCTTTGCATAGACTTTACTCTTCCTGCTTATCCAGAATACATTCTGACTTCCGGGCCTGATCATGCATTGGTAAATATGGACACCCTGGAGGATTATATTTCCCTAACAGTGGATGCTACTATAAAAACTGGAATTGCGAGACAAATGGAAGCATTTAAATCTGGGTTTAATAAGATTTTTCCCATTGAGCATCTTCGAGCTTTTACTGCTGAGGAACTTGAACGATTGTTATGCGGAGAACAAGACTCTTGGGCTCATTCTATTGATCTTCTAGATCATATCAAGTTTGATCATGGATACACTGCAAGCAGTCCTCCCATCATTAATTTACTGGAAATCATTCGAAAGTTCGACAATGAACAACAACGATCATTTCTTCAGTTTGTGACGGGTGCGCCTAGGCTTCCTCCCGGAGGTTTGGCAACTCTGAATCCAAAGCTAACCATTGTTCGGAAGCATTCGAGCAACCAGCCAGATTCAGATTTACCCAGTGTAATGACTTGTGCAAATTACCTCAAGCTTCCGCCTTATTCTTCAAAAGAGAGGATGAAAGAGAAGATCTTGTATGCCATTAAAGAAGGACAAGGATCATTTCATCTTTCTTAG 4557 39.5 MENHDPKDAEILDSMLNDNQACSSVEFKPSSSNSSIQTHIASTNSHLETRDHDVETSSSASASSRSDIDTEKDSYGSCDSDDAEQRQNHYKNYQSRSWAGDHGRMRRIVMQLSDETDPSGQLALLTELCEVLSFCTENSLSSTTSELSAQLLVKLANYDDNPDLMLFAIRAITYLCDVHPQSTEFLVQHQAVEVLCQRLMAIEYLDVAEQCLQALDKISREQPLVCLRGGATMAVLNYIDFFSTSAQRVALSTVVNICRKLPPECPSSFMEAIPLLCNLLKYEDEQIVEDVAACIVKISKRVSESSAILEEFCRHGLIHHITRLLNLNSRSTLSPPVYTDLIRLLAELSSRSMFSFATLYELNISNVLKDMLSTFIRSQGMYSLHAVDGQYNQACELLKFLHELLPTFLEDEKVQLASDKESYLVNHPDVLQNFGMDILPLMIQVVNSGASMSVCYGCLIVVYNLVYLSKSEVLAVLLKDAKIASFLAGAFTRKDHHVLILSLKIADMLLQKLPDIFMNSFIKEGVFFAIEVLLSSEKGLALKEGIPAHESSHFENTRCLCYTFSVNQSSSVTETLSCRLKNNSVRDLAEKIRSIYFASDIYDLGGVTDILQMLQTSSVALDELSNNTSNQNEDKVHHILLELVSELKGREFISTFEFIESGIVKALMNFLSNGQYMMKNQRQNDVYGHYLVVEKRFEVFAKLFLSYSDPTSGELLLSLLLRKLQNILSSLEKFPVVLNQGQGFKQRNCFAAVPNGRRISYPCLRVRFEKGDGELYLCDYSEDILTVDPLSSLDVIIQFLWPKVSTKRTKHIRSSSTSEARDQTENQPIKLSPMEDEKNLPRSPSDEPVSLTPSSMSERTHLDISPESNNSLQSHHPSACGNDDASPRLLLYLDGQQLDSSLTFYQAILKQKINEDEIFDCTKLLDQVYTLTYRRDLDSRDICSPACCPVSVPESNSAYMQCASAFSNIFDSDLTSDLEKHSPTYDVLFLLKSLEGMNRLTFHLLSHQRIHAFAEGRSDSFDEMEISVPSVSQNEFISSKLTEKLEQQMGDSLAMSTGGMPSWCNQLMVSCPFLFSFDARRKYFHLSAFGPLQVLSHTRSNGSSGTPSDRRMSSGSFPRKKVLVFRNRVLDSASEMMEKHVQHKVLLEVEFNDEVGSGLGPTLEFYTLICREFQKSGLGMWREDLSLFSPRQSLVAEDDEILRFPFGLFPRPWSSNLNATVGLEFSEVTKKFVLLGQVVARSIQDGRVLDLCFSKAFYKLILGQEINLLDIQSFDPELGRTLLEFQALVERKKFLESSCGENLSNLDLSYRNTKIEDLCIDFTLPAYPEYILTSGPDHALVNMDTLEDYISLTVDATIKTGIARQMEAFKSGFNKIFPIEHLRAFTAEELERLLCGEQDSWAHSIDLLDHIKFDHGYTASSPPIINLLEIIRKFDNEQQRSFLQFVTGAPRLPPGGLATLNPKLTIVRKHSSNQPDSDLPSVMTCANYLKLPPYSSKERMKEKILYAIKEGQGSFHLS 1518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4544909 4551741 - Bpe015369.1 Bpe04g00706 102515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe04g00706 1518 MobiDBLite consensus disorder prediction 22 96 - -
Bpe04g00706 1518 Gene3D Hect, E3 ligase catalytic domain 1404 1516 - -
Bpe04g00706 1518 MobiDBLite consensus disorder prediction 22 44 - -
Bpe04g00706 1518 MobiDBLite consensus disorder prediction 66 89 - -
Bpe04g00706 1518 SUPERFAMILY Hect, E3 ligase catalytic domain 1116 1511 IPR035983 GO:0004842
Bpe04g00706 1518 MobiDBLite consensus disorder prediction 811 881 - -
Bpe04g00706 1518 SMART hect_3 1130 1518 IPR000569 GO:0004842
Bpe04g00706 1518 MobiDBLite consensus disorder prediction 845 880 - -
Bpe04g00706 1518 SUPERFAMILY ARM repeat 81 537 IPR016024 -
Bpe04g00706 1518 Gene3D - 101 539 IPR011989 -
Bpe04g00706 1518 ProSiteProfiles HECT domain profile. 1133 1518 IPR000569 GO:0004842
Bpe04g00706 1518 CDD HECTc 1121 1516 IPR000569 GO:0004842
Bpe04g00706 1518 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL4 1 1518 - -
Bpe04g00706 1518 Pfam HECT-domain (ubiquitin-transferase) 1167 1518 IPR000569 GO:0004842
Bpe04g00706 1518 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 1 1518 IPR045322 GO:0006511|GO:0061630
Bpe04g00706 1518 Gene3D Hect, E3 ligase catalytic domains 1063 1295 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01555 Bpe04g00706 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00706 Bpe-Chr4:4544909 Bpe15g00815 Bpe-Chr15:18282935 5.73E-111 dispersed
Bpe04g00706 Bpe-Chr4:4544909 Bpe12g00120 Bpe-Chr12:857089 6.85E-74 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe04g00706 K10590 - qsu:112028328 1789.62